RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 FER1L4A9Z1Z3 1794 aa35.69■■■■□ 3.3
PFDN4-205ENST00000493356 UBTFP17480 764 aaKnown RBP35.69■■■■□ 3.3
PFDN4-205ENST00000493356 PLPPR3Q6T4P5 718 aa35.69■■■■□ 3.3
PFDN4-205ENST00000493356 ARHGAP35Q9NRY4 1499 aa35.68■■■■□ 3.3
PFDN4-205ENST00000493356 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
PFDN4-205ENST00000493356 ATP1B4Q9UN42 357 aaPredicted RBP35.68■■■■□ 3.3
PFDN4-205ENST00000493356 HSPA2P54652 639 aa35.67■■■■□ 3.3
PFDN4-205ENST00000493356 MLECQ14165 292 aa35.67■■■■□ 3.3
PFDN4-205ENST00000493356 KIF14Q15058 1648 aa35.64■■■■□ 3.3
PFDN4-205ENST00000493356 EFCAB2Q5VUJ9 269 aa35.63■■■■□ 3.29
PFDN4-205ENST00000493356 ATP10AO60312 1499 aa35.62■■■■□ 3.29
PFDN4-205ENST00000493356 CDK11AQ9UQ88 783 aaPredicted RBP35.61■■■■□ 3.29
PFDN4-205ENST00000493356 C9orf84Q5VXU9 1444 aa35.59■■■■□ 3.29
PFDN4-205ENST00000493356 ARHGEF12Q9NZN5 1544 aa35.59■■■■□ 3.29
PFDN4-205ENST00000493356 TROQ12816 1431 aaPredicted RBP35.57■■■■□ 3.28
PFDN4-205ENST00000493356 LRRIQ1Q96JM4 1722 aa35.53■■■■□ 3.28
PFDN4-205ENST00000493356 ZNF518AQ6AHZ1 1483 aa35.53■■■■□ 3.28
PFDN4-205ENST00000493356 ARHGAP5Q13017 1502 aa35.52■■■■□ 3.28
PFDN4-205ENST00000493356 KDM5CP41229 1560 aa35.5■■■■□ 3.27
PFDN4-205ENST00000493356 CLIP1P30622 1438 aa35.49■■■■□ 3.27
PFDN4-205ENST00000493356 PREX1Q8TCU6 1659 aa35.46■■■■□ 3.27
PFDN4-205ENST00000493356 AFAP1Q8N556 730 aa35.46■■■■□ 3.27
PFDN4-205ENST00000493356 CDC42BPBQ9Y5S2 1711 aa35.43■■■■□ 3.26
PFDN4-205ENST00000493356 CHIC1Q5VXU3 224 aa35.42■■■■□ 3.26
PFDN4-205ENST00000493356 DIP2CQ9Y2E4 1556 aa35.41■■■■□ 3.26
PFDN4-205ENST00000493356 CEBPAP49715 358 aaPredicted RBP35.4■■■■□ 3.26
PFDN4-205ENST00000493356 REREQ9P2R6 1566 aa35.38■■■■□ 3.25
PFDN4-205ENST00000493356 CERKQ8TCT0 537 aa35.37■■■■□ 3.25
PFDN4-205ENST00000493356 PREX2Q70Z35 1606 aa35.35■■■■□ 3.25
PFDN4-205ENST00000493356 MYT1LQ9UL68 1186 aa35.35■■■■□ 3.25
PFDN4-205ENST00000493356 ABCA6Q8N139 1617 aa35.35■■■■□ 3.25
PFDN4-205ENST00000493356 MLH3Q9UHC1 1453 aa35.34■■■■□ 3.25
PFDN4-205ENST00000493356 ABCC1P33527 1531 aa35.32■■■■□ 3.24
PFDN4-205ENST00000493356 CCDC18Q5T9S5 1454 aa35.31■■■■□ 3.24
PFDN4-205ENST00000493356 CASKIN1Q8WXD9 1431 aa35.31■■■■□ 3.24
PFDN4-205ENST00000493356 TRAPPC8Q9Y2L5 1435 aa35.29■■■■□ 3.24
PFDN4-205ENST00000493356 SETD1BQ9UPS6 1966 aaKnown RBP35.29■■■■□ 3.24
PFDN4-205ENST00000493356 ITSN2Q9NZM3 1697 aa35.28■■■■□ 3.24
PFDN4-205ENST00000493356 STRCQ7RTU9 1775 aa35.28■■■■□ 3.24
PFDN4-205ENST00000493356 UHRF1BP1Q6BDS2 1440 aa35.27■■■■□ 3.24
PFDN4-205ENST00000493356 AGLP35573 1532 aa35.25■■■■□ 3.23
PFDN4-205ENST00000493356 C3P01024 1663 aa35.24■■■■□ 3.23
PFDN4-205ENST00000493356 CDC42BPAQ5VT25 1732 aa35.23■■■■□ 3.23
PFDN4-205ENST00000493356 KIDINS220Q9ULH0 1771 aa35.2■■■■□ 3.23
PFDN4-205ENST00000493356 DMRT2Q9Y5R5 561 aa35.19■■■■□ 3.22
PFDN4-205ENST00000493356 FYCO1Q9BQS8 1478 aa35.16■■■■□ 3.22
PFDN4-205ENST00000493356 ESF1Q9H501 851 aaKnown RBP35.13■■■■□ 3.21
PFDN4-205ENST00000493356 SAMD9LQ8IVG5 1584 aa35.09■■■■□ 3.21
PFDN4-205ENST00000493356 CNTLNQ9NXG0 1405 aa35.07■■■■□ 3.21
PFDN4-205ENST00000493356 PTPRTO14522 1441 aa35.06■■■■□ 3.2
PFDN4-205ENST00000493356 SYCP2Q9BX26 1530 aa35.05■■■■□ 3.2
PFDN4-205ENST00000493356 ZNF777Q9ULD5 760 aaPredicted RBP35.04■■■■□ 3.2
PFDN4-205ENST00000493356 GPATCH8Q9UKJ3 1502 aaKnown RBP35.04■■■■□ 3.2
PFDN4-205ENST00000493356 MROH2AA6NES4 1674 aa34.99■■■■□ 3.19
PFDN4-205ENST00000493356 SPAG9O60271 1321 aaKnown RBP34.98■■■■□ 3.19
PFDN4-205ENST00000493356 HNRNPMP52272 730 aaKnown RBP eCLIP34.96■■■■□ 3.19
PFDN4-205ENST00000493356 NCOA1Q15788 1441 aa34.96■■■■□ 3.19
PFDN4-205ENST00000493356 SUPT6HQ7KZ85 1726 aaKnown RBP34.95■■■■□ 3.19
PFDN4-205ENST00000493356 NPATQ14207 1427 aa34.94■■■■□ 3.18
PFDN4-205ENST00000493356 ATP7AQ04656 1500 aa34.94■■■■□ 3.18
PFDN4-205ENST00000493356 INO80Q9ULG1 1556 aaPredicted RBP34.92■■■■□ 3.18
PFDN4-205ENST00000493356 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
PFDN4-205ENST00000493356 LTBP4Q8N2S1 1624 aa34.91■■■■□ 3.18
PFDN4-205ENST00000493356 PLEKHH2Q8IVE3 1493 aa34.9■■■■□ 3.18
PFDN4-205ENST00000493356 ZMYM3Q14202 1370 aa34.9■■■■□ 3.18
PFDN4-205ENST00000493356 PLXNC1O60486 1568 aa34.9■■■■□ 3.18
PFDN4-205ENST00000493356 CFDP1Q9UEE9 299 aaPredicted RBP34.89■■■■□ 3.18
PFDN4-205ENST00000493356 CAMSAP1Q5T5Y3 1602 aa34.87■■■■□ 3.17
PFDN4-205ENST00000493356 CCNB3Q8WWL7 1395 aa34.87■■■■□ 3.17
PFDN4-205ENST00000493356 CLTCQ00610 1675 aaKnown RBP34.86■■■■□ 3.17
PFDN4-205ENST00000493356 A2MP01023 1474 aa34.85■■■■□ 3.17
PFDN4-205ENST00000493356 MTUS2Q5JR59 1369 aa34.81■■■■□ 3.16
PFDN4-205ENST00000493356 IQSEC2Q5JU85 1478 aa34.8■■■■□ 3.16
PFDN4-205ENST00000493356 DISP3Q9P2K9 1392 aa34.79■■■■□ 3.16
PFDN4-205ENST00000493356 MYO3AQ8NEV4 1616 aa34.78■■■■□ 3.16
PFDN4-205ENST00000493356 ZNF142P52746 1687 aaPredicted RBP34.78■■■■□ 3.16
PFDN4-205ENST00000493356 ADGBQ8N7X0 1667 aa34.76■■■■□ 3.16
PFDN4-205ENST00000493356 TIAM1Q13009 1591 aa34.75■■■■□ 3.15
PFDN4-205ENST00000493356 PTPRKQ15262 1439 aa34.75■■■■□ 3.15
PFDN4-205ENST00000493356 GGT6Q6P531 493 aa34.74■■■■□ 3.15
PFDN4-205ENST00000493356 NCKAP5LQ9HCH0 1330 aa34.73■■■■□ 3.15
PFDN4-205ENST00000493356 CEP170BQ9Y4F5 1589 aaPredicted RBP34.71■■■■□ 3.15
PFDN4-205ENST00000493356 ZNF644Q9H582 1327 aaPredicted RBP34.71■■■■□ 3.15
PFDN4-205ENST00000493356 PLA2R1Q13018 1463 aa34.7■■■■□ 3.15
PFDN4-205ENST00000493356 EHBP1L1Q8N3D4 1523 aa34.7■■■■□ 3.14
PFDN4-205ENST00000493356 ILDR2Q71H61 639 aa34.69■■■■□ 3.14
PFDN4-205ENST00000493356 MBD5Q9P267 1494 aa34.69■■■■□ 3.14
PFDN4-205ENST00000493356 PPP6R1Q9UPN7 881 aa34.66■■■■□ 3.14
PFDN4-205ENST00000493356 TCOF1Q13428 1488 aaKnown RBP34.65■■■■□ 3.14
PFDN4-205ENST00000493356 ZNF335Q9H4Z2 1342 aaPredicted RBP34.64■■■■□ 3.14
PFDN4-205ENST00000493356 PKD2Q13563 968 aa34.64■■■■□ 3.14
PFDN4-205ENST00000493356 SPATA31D1Q6ZQQ2 1576 aa34.64■■■■□ 3.14
PFDN4-205ENST00000493356 RTEL1-TNFRSF6BF6WH68 1400 aa34.63■■■■□ 3.13
PFDN4-205ENST00000493356 CEP162Q5TB80 1403 aa34.63■■■■□ 3.13
PFDN4-205ENST00000493356 DHX29Q7Z478 1369 aaKnown RBP34.57■■■■□ 3.12
PFDN4-205ENST00000493356 A2ML1A8K2U0 1454 aa34.55■■■■□ 3.12
PFDN4-205ENST00000493356 DNMT1P26358 1616 aaKnown RBP34.54■■■■□ 3.12
PFDN4-205ENST00000493356 SOCS7O14512 581 aa34.53■■■■□ 3.12
PFDN4-205ENST00000493356 CCDC141Q6ZP82 1450 aa34.51■■■■□ 3.11
PFDN4-205ENST00000493356 UBAP1LF5GYI3 381 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms