RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ATP10AO60312 1499 aa18.27■□□□□ 0.52
SNRNP200-207ENST00000493271 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
SNRNP200-207ENST00000493271 FER1L4A9Z1Z3 1794 aa18.27■□□□□ 0.51
SNRNP200-207ENST00000493271 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
SNRNP200-207ENST00000493271 ARHGEF12Q9NZN5 1544 aa18.25■□□□□ 0.51
SNRNP200-207ENST00000493271 SIGLEC1Q9BZZ2 1709 aa18.25■□□□□ 0.51
SNRNP200-207ENST00000493271 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
SNRNP200-207ENST00000493271 HSPA2P54652 639 aa18.24■□□□□ 0.51
SNRNP200-207ENST00000493271 KIF14Q15058 1648 aa18.23■□□□□ 0.51
SNRNP200-207ENST00000493271 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
SNRNP200-207ENST00000493271 CLIP1P30622 1438 aa18.23■□□□□ 0.51
SNRNP200-207ENST00000493271 MLECQ14165 292 aa18.22■□□□□ 0.51
SNRNP200-207ENST00000493271 TROQ12816 1431 aaPredicted RBP18.22■□□□□ 0.51
SNRNP200-207ENST00000493271 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
SNRNP200-207ENST00000493271 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-207ENST00000493271 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
SNRNP200-207ENST00000493271 KDM5CP41229 1560 aa18.2■□□□□ 0.5
SNRNP200-207ENST00000493271 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
SNRNP200-207ENST00000493271 ARHGAP5Q13017 1502 aa18.18■□□□□ 0.5
SNRNP200-207ENST00000493271 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
SNRNP200-207ENST00000493271 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
SNRNP200-207ENST00000493271 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
SNRNP200-207ENST00000493271 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.5
SNRNP200-207ENST00000493271 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
SNRNP200-207ENST00000493271 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
SNRNP200-207ENST00000493271 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
SNRNP200-207ENST00000493271 DIP2CQ9Y2E4 1556 aa18.12■□□□□ 0.49
SNRNP200-207ENST00000493271 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
SNRNP200-207ENST00000493271 AGLP35573 1532 aa18.11■□□□□ 0.49
SNRNP200-207ENST00000493271 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
SNRNP200-207ENST00000493271 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
SNRNP200-207ENST00000493271 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
SNRNP200-207ENST00000493271 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.48
SNRNP200-207ENST00000493271 ABCC1P33527 1531 aa18.08■□□□□ 0.48
SNRNP200-207ENST00000493271 CASKIN1Q8WXD9 1431 aa18.07■□□□□ 0.48
SNRNP200-207ENST00000493271 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
SNRNP200-207ENST00000493271 ABCA6Q8N139 1617 aa18.06■□□□□ 0.48
SNRNP200-207ENST00000493271 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
SNRNP200-207ENST00000493271 CNTLNQ9NXG0 1405 aa18.06■□□□□ 0.48
SNRNP200-207ENST00000493271 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
SNRNP200-207ENST00000493271 PTPRTO14522 1441 aa18.04■□□□□ 0.48
SNRNP200-207ENST00000493271 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
SNRNP200-207ENST00000493271 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
SNRNP200-207ENST00000493271 TRAPPC8Q9Y2L5 1435 aa18.03■□□□□ 0.48
SNRNP200-207ENST00000493271 C3P01024 1663 aa18.03■□□□□ 0.48
SNRNP200-207ENST00000493271 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
SNRNP200-207ENST00000493271 FYCO1Q9BQS8 1478 aa18.01■□□□□ 0.47
SNRNP200-207ENST00000493271 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
SNRNP200-207ENST00000493271 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
SNRNP200-207ENST00000493271 NPATQ14207 1427 aa17.98■□□□□ 0.47
SNRNP200-207ENST00000493271 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
SNRNP200-207ENST00000493271 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
SNRNP200-207ENST00000493271 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.46
SNRNP200-207ENST00000493271 PLEKHH2Q8IVE3 1493 aa17.95■□□□□ 0.46
SNRNP200-207ENST00000493271 NCOA1Q15788 1441 aa17.94■□□□□ 0.46
SNRNP200-207ENST00000493271 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
SNRNP200-207ENST00000493271 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
SNRNP200-207ENST00000493271 GPATCH8Q9UKJ3 1502 aaKnown RBP17.92■□□□□ 0.46
SNRNP200-207ENST00000493271 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
SNRNP200-207ENST00000493271 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
SNRNP200-207ENST00000493271 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
SNRNP200-207ENST00000493271 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
SNRNP200-207ENST00000493271 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
SNRNP200-207ENST00000493271 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
SNRNP200-207ENST00000493271 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
SNRNP200-207ENST00000493271 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
SNRNP200-207ENST00000493271 INO80Q9ULG1 1556 aaPredicted RBP17.87■□□□□ 0.45
SNRNP200-207ENST00000493271 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
SNRNP200-207ENST00000493271 CFDP1Q9UEE9 299 aaPredicted RBP17.86■□□□□ 0.45
SNRNP200-207ENST00000493271 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
SNRNP200-207ENST00000493271 A2MP01023 1474 aa17.86■□□□□ 0.45
SNRNP200-207ENST00000493271 PLA2R1Q13018 1463 aa17.86■□□□□ 0.45
SNRNP200-207ENST00000493271 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNRNP200-207ENST00000493271 PKD2Q13563 968 aa17.84■□□□□ 0.45
SNRNP200-207ENST00000493271 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
SNRNP200-207ENST00000493271 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.45
SNRNP200-207ENST00000493271 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
SNRNP200-207ENST00000493271 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
SNRNP200-207ENST00000493271 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
SNRNP200-207ENST00000493271 ADGBQ8N7X0 1667 aa17.8■□□□□ 0.44
SNRNP200-207ENST00000493271 SPATA31D1Q6ZQQ2 1576 aa17.8■□□□□ 0.44
SNRNP200-207ENST00000493271 CEP170BQ9Y4F5 1589 aaPredicted RBP17.8■□□□□ 0.44
SNRNP200-207ENST00000493271 SOCS7O14512 581 aa17.8■□□□□ 0.44
SNRNP200-207ENST00000493271 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
SNRNP200-207ENST00000493271 TCOF1Q13428 1488 aaKnown RBP17.79■□□□□ 0.44
SNRNP200-207ENST00000493271 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
SNRNP200-207ENST00000493271 GGT6Q6P531 493 aa17.77■□□□□ 0.44
SNRNP200-207ENST00000493271 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
SNRNP200-207ENST00000493271 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
SNRNP200-207ENST00000493271 FAM135AQ9P2D6 1515 aa17.76■□□□□ 0.43
SNRNP200-207ENST00000493271 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
SNRNP200-207ENST00000493271 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
SNRNP200-207ENST00000493271 CEP162Q5TB80 1403 aa17.74■□□□□ 0.43
SNRNP200-207ENST00000493271 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
SNRNP200-207ENST00000493271 ZNF335Q9H4Z2 1342 aaPredicted RBP17.73■□□□□ 0.43
SNRNP200-207ENST00000493271 DHX29Q7Z478 1369 aaKnown RBP17.73■□□□□ 0.43
SNRNP200-207ENST00000493271 A2ML1A8K2U0 1454 aa17.73■□□□□ 0.43
SNRNP200-207ENST00000493271 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
SNRNP200-207ENST00000493271 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
SNRNP200-207ENST00000493271 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms