RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 VPS8Q8N3P4 1428 aa20.81■□□□□ 0.92
BRAT1-206ENST00000493232 PKD2Q13563 968 aa20.81■□□□□ 0.92
BRAT1-206ENST00000493232 NAP1L2Q9ULW6 460 aaPredicted RBP20.8■□□□□ 0.92
BRAT1-206ENST00000493232 GGT6Q6P531 493 aa20.8■□□□□ 0.92
BRAT1-206ENST00000493232 GOLGA6L4A6NEF3 574 aa20.8■□□□□ 0.92
BRAT1-206ENST00000493232 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
BRAT1-206ENST00000493232 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
BRAT1-206ENST00000493232 SOGA1O94964 1423 aa20.79■□□□□ 0.92
BRAT1-206ENST00000493232 TULP1O00294 542 aaPredicted RBP20.78■□□□□ 0.92
BRAT1-206ENST00000493232 PLCB2Q00722 1185 aa20.78■□□□□ 0.92
BRAT1-206ENST00000493232 HSPA5P11021 654 aaKnown RBP20.78■□□□□ 0.92
BRAT1-206ENST00000493232 SOX12O15370 315 aa20.78■□□□□ 0.92
BRAT1-206ENST00000493232 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
BRAT1-206ENST00000493232 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.91
BRAT1-206ENST00000493232 EFCAB2Q5VUJ9 269 aa20.76■□□□□ 0.91
BRAT1-206ENST00000493232 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
BRAT1-206ENST00000493232 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
BRAT1-206ENST00000493232 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
BRAT1-206ENST00000493232 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
BRAT1-206ENST00000493232 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
BRAT1-206ENST00000493232 STK26Q9P289 416 aa20.73■□□□□ 0.91
BRAT1-206ENST00000493232 RALBP1Q15311 655 aa20.72■□□□□ 0.91
BRAT1-206ENST00000493232 EIF3AQ14152 1382 aaKnown RBP20.72■□□□□ 0.91
BRAT1-206ENST00000493232 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
BRAT1-206ENST00000493232 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
BRAT1-206ENST00000493232 NUP155O75694 1391 aa20.69■□□□□ 0.9
BRAT1-206ENST00000493232 NAP1L5Q96NT1 182 aaPredicted RBP20.67■□□□□ 0.9
BRAT1-206ENST00000493232 U2AF1L5P0DN76 240 aaPredicted RBP20.66■□□□□ 0.9
BRAT1-206ENST00000493232 U2AF1Q01081 240 aaKnown RBP eCLIP20.66■□□□□ 0.9
BRAT1-206ENST00000493232 KIAA1211Q6ZU35 1233 aa20.66■□□□□ 0.9
BRAT1-206ENST00000493232 MPHOSPH9Q99550 1183 aa20.66■□□□□ 0.9
BRAT1-206ENST00000493232 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
BRAT1-206ENST00000493232 L1TD1Q5T7N2 865 aaKnown RBP20.64■□□□□ 0.89
BRAT1-206ENST00000493232 RWDD1Q9H446 243 aaPredicted RBP20.64■□□□□ 0.89
BRAT1-206ENST00000493232 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
BRAT1-206ENST00000493232 CHAF1AQ13111 956 aaPredicted RBP20.63■□□□□ 0.89
BRAT1-206ENST00000493232 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
BRAT1-206ENST00000493232 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
BRAT1-206ENST00000493232 HDAC5Q9UQL6 1122 aa20.62■□□□□ 0.89
BRAT1-206ENST00000493232 PTMSP20962 102 aa20.61■□□□□ 0.89
BRAT1-206ENST00000493232 SPAG9O60271 1321 aaKnown RBP20.6■□□□□ 0.89
BRAT1-206ENST00000493232 KANK4Q5T7N3 995 aaPredicted RBP20.6■□□□□ 0.89
BRAT1-206ENST00000493232 TERF2IPQ9NYB0 399 aa20.6■□□□□ 0.89
BRAT1-206ENST00000493232 RCAN3Q9UKA8 241 aa20.6■□□□□ 0.89
BRAT1-206ENST00000493232 GNL2Q13823 731 aaKnown RBP20.6■□□□□ 0.89
BRAT1-206ENST00000493232 FOXD1Q16676 465 aa20.6■□□□□ 0.89
BRAT1-206ENST00000493232 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
BRAT1-206ENST00000493232 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
BRAT1-206ENST00000493232 STK31Q9BXU1 1019 aa20.58■□□□□ 0.89
BRAT1-206ENST00000493232 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
BRAT1-206ENST00000493232 ITPRIPQ8IWB1 547 aa20.58■□□□□ 0.88
BRAT1-206ENST00000493232 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
BRAT1-206ENST00000493232 KIF3BO15066 747 aa20.56■□□□□ 0.88
BRAT1-206ENST00000493232 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
BRAT1-206ENST00000493232 APBB1O00213 710 aa20.55■□□□□ 0.88
BRAT1-206ENST00000493232 MSNP26038 577 aaKnown RBP20.55■□□□□ 0.88
BRAT1-206ENST00000493232 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
BRAT1-206ENST00000493232 GBP4Q96PP9 640 aa20.55■□□□□ 0.88
BRAT1-206ENST00000493232 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
BRAT1-206ENST00000493232 DRC7Q8IY82 874 aa20.53■□□□□ 0.88
BRAT1-206ENST00000493232 CCDC18Q5T9S5 1454 aa20.52■□□□□ 0.88
BRAT1-206ENST00000493232 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
BRAT1-206ENST00000493232 HMMRO75330 724 aa20.52■□□□□ 0.88
BRAT1-206ENST00000493232 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
BRAT1-206ENST00000493232 TCERG1O14776 1098 aaKnown RBP20.52■□□□□ 0.88
BRAT1-206ENST00000493232 GPATCH3Q96I76 525 aa20.52■□□□□ 0.88
BRAT1-206ENST00000493232 TMX4Q9H1E5 349 aaPredicted RBP20.5■□□□□ 0.87
BRAT1-206ENST00000493232 CLSTN1O94985 981 aa20.5■□□□□ 0.87
BRAT1-206ENST00000493232 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
BRAT1-206ENST00000493232 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
BRAT1-206ENST00000493232 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
BRAT1-206ENST00000493232 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
BRAT1-206ENST00000493232 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
BRAT1-206ENST00000493232 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
BRAT1-206ENST00000493232 PHLDB1Q86UU1 1377 aa20.47■□□□□ 0.87
BRAT1-206ENST00000493232 NLRP13Q86W25 1043 aa20.47■□□□□ 0.87
BRAT1-206ENST00000493232 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
BRAT1-206ENST00000493232 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
BRAT1-206ENST00000493232 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
BRAT1-206ENST00000493232 SYAP1Q96A49 352 aaPredicted RBP20.45■□□□□ 0.86
BRAT1-206ENST00000493232 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
BRAT1-206ENST00000493232 L3MBTL2Q969R5 705 aa20.44■□□□□ 0.86
BRAT1-206ENST00000493232 CCDC34Q96HJ3 373 aa20.43■□□□□ 0.86
BRAT1-206ENST00000493232 KIAA2012Q0VF49 1180 aa20.42■□□□□ 0.86
BRAT1-206ENST00000493232 RTN4Q9NQC3 1192 aaKnown RBP20.41■□□□□ 0.86
BRAT1-206ENST00000493232 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
BRAT1-206ENST00000493232 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
BRAT1-206ENST00000493232 AMPHP49418 695 aa20.41■□□□□ 0.86
BRAT1-206ENST00000493232 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
BRAT1-206ENST00000493232 RBM19Q9Y4C8 960 aaKnown RBP20.41■□□□□ 0.86
BRAT1-206ENST00000493232 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
BRAT1-206ENST00000493232 CHMP3Q9Y3E7 222 aa20.4■□□□□ 0.86
BRAT1-206ENST00000493232 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
BRAT1-206ENST00000493232 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.85
BRAT1-206ENST00000493232 TPM4P67936 248 aa20.38■□□□□ 0.85
BRAT1-206ENST00000493232 TRIM6-TRIM34B2RNG4 842 aa20.37■□□□□ 0.85
BRAT1-206ENST00000493232 CSPP1Q1MSJ5 1256 aa20.37■□□□□ 0.85
BRAT1-206ENST00000493232 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
BRAT1-206ENST00000493232 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
BRAT1-206ENST00000493232 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms