RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 SCAPERQ9BY12 1400 aa25.87■■□□□ 1.73
EPHB4-209ENST00000492878 ATP10AO60312 1499 aa25.86■■□□□ 1.73
EPHB4-209ENST00000492878 MLECQ14165 292 aa25.86■■□□□ 1.73
EPHB4-209ENST00000492878 STRCQ7RTU9 1775 aa25.84■■□□□ 1.73
EPHB4-209ENST00000492878 C9orf84Q5VXU9 1444 aa25.84■■□□□ 1.73
EPHB4-209ENST00000492878 ILDR2Q71H61 639 aa25.83■■□□□ 1.73
EPHB4-209ENST00000492878 CDK13Q14004 1512 aaKnown RBP25.8■■□□□ 1.72
EPHB4-209ENST00000492878 SOCS7O14512 581 aa25.79■■□□□ 1.72
EPHB4-209ENST00000492878 DISP3Q9P2K9 1392 aa25.79■■□□□ 1.72
EPHB4-209ENST00000492878 RANGAP1P46060 587 aaPredicted RBP25.77■■□□□ 1.72
EPHB4-209ENST00000492878 DMRT2Q9Y5R5 561 aa25.77■■□□□ 1.72
EPHB4-209ENST00000492878 EEA1Q15075 1411 aa25.77■■□□□ 1.72
EPHB4-209ENST00000492878 CEBPAP49715 358 aaPredicted RBP25.75■■□□□ 1.71
EPHB4-209ENST00000492878 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
EPHB4-209ENST00000492878 MYO5CQ9NQX4 1742 aa25.73■■□□□ 1.71
EPHB4-209ENST00000492878 KDM5CP41229 1560 aa25.73■■□□□ 1.71
EPHB4-209ENST00000492878 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
EPHB4-209ENST00000492878 EFCAB2Q5VUJ9 269 aa25.71■■□□□ 1.71
EPHB4-209ENST00000492878 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
EPHB4-209ENST00000492878 PTPRTO14522 1441 aa25.7■■□□□ 1.7
EPHB4-209ENST00000492878 REREQ9P2R6 1566 aa25.69■■□□□ 1.7
EPHB4-209ENST00000492878 SPATA31D1Q6ZQQ2 1576 aa25.66■■□□□ 1.7
EPHB4-209ENST00000492878 DIP2CQ9Y2E4 1556 aa25.66■■□□□ 1.7
EPHB4-209ENST00000492878 KIF14Q15058 1648 aa25.64■■□□□ 1.7
EPHB4-209ENST00000492878 LTBP4Q8N2S1 1624 aa25.64■■□□□ 1.7
EPHB4-209ENST00000492878 C3P01024 1663 aa25.63■■□□□ 1.69
EPHB4-209ENST00000492878 IQSEC2Q5JU85 1478 aa25.61■■□□□ 1.69
EPHB4-209ENST00000492878 AFAP1Q8N556 730 aa25.61■■□□□ 1.69
EPHB4-209ENST00000492878 MLH3Q9UHC1 1453 aa25.6■■□□□ 1.69
EPHB4-209ENST00000492878 AGLP35573 1532 aa25.59■■□□□ 1.69
EPHB4-209ENST00000492878 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
EPHB4-209ENST00000492878 FMN1Q68DA7 1419 aa25.58■■□□□ 1.69
EPHB4-209ENST00000492878 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.68
EPHB4-209ENST00000492878 TROQ12816 1431 aaPredicted RBP25.56■■□□□ 1.68
EPHB4-209ENST00000492878 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
EPHB4-209ENST00000492878 CDK11AQ9UQ88 783 aaPredicted RBP25.55■■□□□ 1.68
EPHB4-209ENST00000492878 NCOA1Q15788 1441 aa25.54■■□□□ 1.68
EPHB4-209ENST00000492878 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
EPHB4-209ENST00000492878 ARHGAP35Q9NRY4 1499 aa25.51■■□□□ 1.67
EPHB4-209ENST00000492878 ABCC1P33527 1531 aa25.48■■□□□ 1.67
EPHB4-209ENST00000492878 LRRIQ1Q96JM4 1722 aa25.48■■□□□ 1.67
EPHB4-209ENST00000492878 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
EPHB4-209ENST00000492878 CLIP1P30622 1438 aa25.46■■□□□ 1.67
EPHB4-209ENST00000492878 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
EPHB4-209ENST00000492878 KIDINS220Q9ULH0 1771 aa25.45■■□□□ 1.66
EPHB4-209ENST00000492878 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
EPHB4-209ENST00000492878 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
EPHB4-209ENST00000492878 NPATQ14207 1427 aa25.44■■□□□ 1.66
EPHB4-209ENST00000492878 MROH2AA6NES4 1674 aa25.42■■□□□ 1.66
EPHB4-209ENST00000492878 CAMSAP1Q5T5Y3 1602 aa25.41■■□□□ 1.66
EPHB4-209ENST00000492878 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
EPHB4-209ENST00000492878 ESF1Q9H501 851 aaKnown RBP25.4■■□□□ 1.66
EPHB4-209ENST00000492878 SAMD9LQ8IVG5 1584 aa25.33■■□□□ 1.65
EPHB4-209ENST00000492878 ZNF142P52746 1687 aaPredicted RBP25.32■■□□□ 1.64
EPHB4-209ENST00000492878 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
EPHB4-209ENST00000492878 CDC42BPAQ5VT25 1732 aa25.32■■□□□ 1.64
EPHB4-209ENST00000492878 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
EPHB4-209ENST00000492878 PLA2R1Q13018 1463 aa25.32■■□□□ 1.64
EPHB4-209ENST00000492878 ZNF335Q9H4Z2 1342 aaPredicted RBP25.31■■□□□ 1.64
EPHB4-209ENST00000492878 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
EPHB4-209ENST00000492878 CCDC18Q5T9S5 1454 aa25.29■■□□□ 1.64
EPHB4-209ENST00000492878 NCKAP5LQ9HCH0 1330 aa25.29■■□□□ 1.64
EPHB4-209ENST00000492878 MYO3AQ8NEV4 1616 aa25.28■■□□□ 1.64
EPHB4-209ENST00000492878 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
EPHB4-209ENST00000492878 UBAP1LF5GYI3 381 aa25.26■■□□□ 1.63
EPHB4-209ENST00000492878 PKD2Q13563 968 aa25.26■■□□□ 1.63
EPHB4-209ENST00000492878 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
EPHB4-209ENST00000492878 CEP170BQ9Y4F5 1589 aaPredicted RBP25.24■■□□□ 1.63
EPHB4-209ENST00000492878 PTPRKQ15262 1439 aa25.24■■□□□ 1.63
EPHB4-209ENST00000492878 CLTCQ00610 1675 aaKnown RBP25.23■■□□□ 1.63
EPHB4-209ENST00000492878 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
EPHB4-209ENST00000492878 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
EPHB4-209ENST00000492878 INO80Q9ULG1 1556 aaPredicted RBP25.2■■□□□ 1.62
EPHB4-209ENST00000492878 ATP7AQ04656 1500 aa25.2■■□□□ 1.62
EPHB4-209ENST00000492878 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
EPHB4-209ENST00000492878 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
EPHB4-209ENST00000492878 GPATCH8Q9UKJ3 1502 aaKnown RBP25.18■■□□□ 1.62
EPHB4-209ENST00000492878 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
EPHB4-209ENST00000492878 A2MP01023 1474 aa25.15■■□□□ 1.62
EPHB4-209ENST00000492878 HNRNPMP52272 730 aaKnown RBP eCLIP25.12■■□□□ 1.61
EPHB4-209ENST00000492878 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
EPHB4-209ENST00000492878 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
EPHB4-209ENST00000492878 MED1Q15648 1581 aaPredicted RBP25.11■■□□□ 1.61
EPHB4-209ENST00000492878 A2ML1A8K2U0 1454 aa25.11■■□□□ 1.61
EPHB4-209ENST00000492878 PLEKHH2Q8IVE3 1493 aa25.11■■□□□ 1.61
EPHB4-209ENST00000492878 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
EPHB4-209ENST00000492878 DNMT1P26358 1616 aaKnown RBP25.1■■□□□ 1.61
EPHB4-209ENST00000492878 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
EPHB4-209ENST00000492878 HSPA1LP34931 641 aa25.07■■□□□ 1.6
EPHB4-209ENST00000492878 CPS1P31327 1500 aa25.07■■□□□ 1.6
EPHB4-209ENST00000492878 NEURL4Q96JN8 1562 aa25.06■■□□□ 1.6
EPHB4-209ENST00000492878 GGT6Q6P531 493 aa25.05■■□□□ 1.6
EPHB4-209ENST00000492878 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
EPHB4-209ENST00000492878 SHANK2Q9UPX8 1470 aa25.02■■□□□ 1.6
EPHB4-209ENST00000492878 CFDP1Q9UEE9 299 aaPredicted RBP25.01■■□□□ 1.59
EPHB4-209ENST00000492878 TOM1O60784 492 aa24.99■■□□□ 1.59
EPHB4-209ENST00000492878 ALKQ9UM73 1620 aa24.99■■□□□ 1.59
EPHB4-209ENST00000492878 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
EPHB4-209ENST00000492878 MBD5Q9P267 1494 aa24.97■■□□□ 1.59
EPHB4-209ENST00000492878 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms