RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 MTUS2Q5JR59 1369 aa16.95■□□□□ 0.3
CDC42SE1-206ENST00000492796 DENND4BO75064 1496 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE1-206ENST00000492796 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
CDC42SE1-206ENST00000492796 EFCAB2Q5VUJ9 269 aa16.92■□□□□ 0.3
CDC42SE1-206ENST00000492796 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
CDC42SE1-206ENST00000492796 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
CDC42SE1-206ENST00000492796 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 SUPT6HQ7KZ85 1726 aaKnown RBP16.89■□□□□ 0.29
CDC42SE1-206ENST00000492796 ABCC1P33527 1531 aa16.88■□□□□ 0.29
CDC42SE1-206ENST00000492796 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
CDC42SE1-206ENST00000492796 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
CDC42SE1-206ENST00000492796 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
CDC42SE1-206ENST00000492796 CCNB3Q8WWL7 1395 aa16.86■□□□□ 0.29
CDC42SE1-206ENST00000492796 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
CDC42SE1-206ENST00000492796 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
CDC42SE1-206ENST00000492796 KDM5CP41229 1560 aa16.85■□□□□ 0.29
CDC42SE1-206ENST00000492796 ZFYVE16Q7Z3T8 1539 aa16.84■□□□□ 0.29
CDC42SE1-206ENST00000492796 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
CDC42SE1-206ENST00000492796 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
CDC42SE1-206ENST00000492796 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
CDC42SE1-206ENST00000492796 HECW2Q9P2P5 1572 aa16.81■□□□□ 0.28
CDC42SE1-206ENST00000492796 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-206ENST00000492796 SYCP2Q9BX26 1530 aa16.79■□□□□ 0.28
CDC42SE1-206ENST00000492796 ARHGEF12Q9NZN5 1544 aa16.79■□□□□ 0.28
CDC42SE1-206ENST00000492796 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
CDC42SE1-206ENST00000492796 KDM4FA0A1W2PPD8 638 aa16.77■□□□□ 0.28
CDC42SE1-206ENST00000492796 APLP2Q06481 763 aa16.77■□□□□ 0.28
CDC42SE1-206ENST00000492796 YEATS2Q9ULM3 1422 aa16.77■□□□□ 0.27
CDC42SE1-206ENST00000492796 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
CDC42SE1-206ENST00000492796 TRAPPC8Q9Y2L5 1435 aa16.76■□□□□ 0.27
CDC42SE1-206ENST00000492796 ZNF777Q9ULD5 760 aaPredicted RBP16.75■□□□□ 0.27
CDC42SE1-206ENST00000492796 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
CDC42SE1-206ENST00000492796 ATP10AO60312 1499 aa16.73■□□□□ 0.27
CDC42SE1-206ENST00000492796 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
CDC42SE1-206ENST00000492796 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
CDC42SE1-206ENST00000492796 C9orf84Q5VXU9 1444 aa16.73■□□□□ 0.27
CDC42SE1-206ENST00000492796 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
CDC42SE1-206ENST00000492796 REREQ9P2R6 1566 aa16.72■□□□□ 0.27
CDC42SE1-206ENST00000492796 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
CDC42SE1-206ENST00000492796 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
CDC42SE1-206ENST00000492796 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
CDC42SE1-206ENST00000492796 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
CDC42SE1-206ENST00000492796 SIGLEC1Q9BZZ2 1709 aa16.71■□□□□ 0.27
CDC42SE1-206ENST00000492796 INO80Q9ULG1 1556 aaPredicted RBP16.7■□□□□ 0.26
CDC42SE1-206ENST00000492796 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
CDC42SE1-206ENST00000492796 MBD5Q9P267 1494 aa16.69■□□□□ 0.26
CDC42SE1-206ENST00000492796 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
CDC42SE1-206ENST00000492796 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
CDC42SE1-206ENST00000492796 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDC42SE1-206ENST00000492796 ATP7AQ04656 1500 aa16.68■□□□□ 0.26
CDC42SE1-206ENST00000492796 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
CDC42SE1-206ENST00000492796 ARHGEF5Q12774 1597 aa16.67■□□□□ 0.26
CDC42SE1-206ENST00000492796 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
CDC42SE1-206ENST00000492796 CCDC141Q6ZP82 1450 aa16.66■□□□□ 0.26
CDC42SE1-206ENST00000492796 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-206ENST00000492796 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE1-206ENST00000492796 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
CDC42SE1-206ENST00000492796 AGLP35573 1532 aa16.64■□□□□ 0.25
CDC42SE1-206ENST00000492796 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
CDC42SE1-206ENST00000492796 ADGBQ8N7X0 1667 aa16.63■□□□□ 0.25
CDC42SE1-206ENST00000492796 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
CDC42SE1-206ENST00000492796 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
CDC42SE1-206ENST00000492796 RIMS1Q86UR5 1692 aaKnown RBP16.61■□□□□ 0.25
CDC42SE1-206ENST00000492796 PTPN23Q9H3S7 1636 aa16.6■□□□□ 0.25
CDC42SE1-206ENST00000492796 PTPRMP28827 1452 aa16.6■□□□□ 0.25
CDC42SE1-206ENST00000492796 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
CDC42SE1-206ENST00000492796 MAST1Q9Y2H9 1570 aa16.59■□□□□ 0.25
CDC42SE1-206ENST00000492796 A2MP01023 1474 aa16.58■□□□□ 0.24
CDC42SE1-206ENST00000492796 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.24
CDC42SE1-206ENST00000492796 CROCC2H7BZ55 1655 aa16.56■□□□□ 0.24
CDC42SE1-206ENST00000492796 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
CDC42SE1-206ENST00000492796 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
CDC42SE1-206ENST00000492796 MLECQ14165 292 aa16.54■□□□□ 0.24
CDC42SE1-206ENST00000492796 DNMT1P26358 1616 aaKnown RBP16.54■□□□□ 0.24
CDC42SE1-206ENST00000492796 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
CDC42SE1-206ENST00000492796 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-206ENST00000492796 DAPK1P53355 1430 aa16.49■□□□□ 0.23
CDC42SE1-206ENST00000492796 CNTLNQ9NXG0 1405 aa16.49■□□□□ 0.23
CDC42SE1-206ENST00000492796 MROH2AA6NES4 1674 aa16.49■□□□□ 0.23
CDC42SE1-206ENST00000492796 ABCC5O15440 1437 aa16.48■□□□□ 0.23
CDC42SE1-206ENST00000492796 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
CDC42SE1-206ENST00000492796 FAM135AQ9P2D6 1515 aa16.46■□□□□ 0.23
CDC42SE1-206ENST00000492796 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
CDC42SE1-206ENST00000492796 C3P01024 1663 aa16.46■□□□□ 0.23
CDC42SE1-206ENST00000492796 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
CDC42SE1-206ENST00000492796 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
CDC42SE1-206ENST00000492796 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
CDC42SE1-206ENST00000492796 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
CDC42SE1-206ENST00000492796 PREX1Q8TCU6 1659 aa16.42■□□□□ 0.22
CDC42SE1-206ENST00000492796 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
CDC42SE1-206ENST00000492796 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CDC42SE1-206ENST00000492796 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
CDC42SE1-206ENST00000492796 ERBINQ96RT1 1412 aa16.4■□□□□ 0.22
CDC42SE1-206ENST00000492796 FAM50AQ14320 339 aaKnown RBP16.4■□□□□ 0.22
CDC42SE1-206ENST00000492796 GGT6Q6P531 493 aa16.4■□□□□ 0.22
CDC42SE1-206ENST00000492796 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms