RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
CLK1-213ENST00000492793 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
CLK1-213ENST00000492793 PELP1Q8IZL8 1130 aaKnown RBP8.9□□□□□ -0.98
CLK1-213ENST00000492793 TMC2Q8TDI7 906 aa8.9□□□□□ -0.98
CLK1-213ENST00000492793 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
CLK1-213ENST00000492793 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
CLK1-213ENST00000492793 MFSD10Q14728 455 aa8.87□□□□□ -0.99
CLK1-213ENST00000492793 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
CLK1-213ENST00000492793 ARHGEF1Q92888 912 aaKnown RBP8.87□□□□□ -0.99
CLK1-213ENST00000492793 TULP1O00294 542 aaPredicted RBP8.86□□□□□ -0.99
CLK1-213ENST00000492793 GPHNQ9NQX3 736 aaPredicted RBP8.86□□□□□ -0.99
CLK1-213ENST00000492793 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
CLK1-213ENST00000492793 C7P10643 843 aa8.85□□□□□ -0.99
CLK1-213ENST00000492793 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
CLK1-213ENST00000492793 DSG2Q14126 1118 aa8.82□□□□□ -1
CLK1-213ENST00000492793 C2orf72A6NCS6 295 aa8.81□□□□□ -1
CLK1-213ENST00000492793 SEMA3EO15041 775 aa8.8□□□□□ -1
CLK1-213ENST00000492793 C3orf67Q6ZVT6 689 aa8.8□□□□□ -1
CLK1-213ENST00000492793 PLPP6Q8IY26 295 aa8.8□□□□□ -1
CLK1-213ENST00000492793 TMEM121BQ9BXQ6 578 aaPredicted RBP8.8□□□□□ -1
CLK1-213ENST00000492793 FOXK1P85037 733 aa8.79□□□□□ -1
CLK1-213ENST00000492793 CAMK2BQ13554 666 aa8.78□□□□□ -1
CLK1-213ENST00000492793 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
CLK1-213ENST00000492793 POTEFA5A3E0 1075 aa8.77□□□□□ -1.01
CLK1-213ENST00000492793 DPYSL4O14531 572 aa8.76□□□□□ -1.01
CLK1-213ENST00000492793 SMYD5Q6GMV2 418 aa8.75□□□□□ -1.01
CLK1-213ENST00000492793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLK1-213ENST00000492793 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
CLK1-213ENST00000492793 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
CLK1-213ENST00000492793 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
CLK1-213ENST00000492793 KIF3CO14782 793 aa8.73□□□□□ -1.01
CLK1-213ENST00000492793 MAP3K9P80192 1104 aa8.73□□□□□ -1.01
CLK1-213ENST00000492793 TMEM92Q6UXU6 159 aa8.73□□□□□ -1.01
CLK1-213ENST00000492793 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
CLK1-213ENST00000492793 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
CLK1-213ENST00000492793 SPDYE16A6NNV3 312 aaPredicted RBP8.69□□□□□ -1.02
CLK1-213ENST00000492793 MLLT3P42568 568 aaPredicted RBP8.68□□□□□ -1.02
CLK1-213ENST00000492793 TBC1D12O60347 775 aa8.67□□□□□ -1.02
CLK1-213ENST00000492793 PDIA6Q15084 440 aa8.66□□□□□ -1.02
CLK1-213ENST00000492793 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CLK1-213ENST00000492793 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
CLK1-213ENST00000492793 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
CLK1-213ENST00000492793 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
CLK1-213ENST00000492793 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
CLK1-213ENST00000492793 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
CLK1-213ENST00000492793 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
CLK1-213ENST00000492793 EVI5O60447 810 aa8.6□□□□□ -1.03
CLK1-213ENST00000492793 DDX12PQ92771 950 aa8.6□□□□□ -1.03
CLK1-213ENST00000492793 OTUD5Q96G74 571 aa8.59□□□□□ -1.03
CLK1-213ENST00000492793 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
CLK1-213ENST00000492793 SCUBE2Q9NQ36 999 aa8.58□□□□□ -1.04
CLK1-213ENST00000492793 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
CLK1-213ENST00000492793 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
CLK1-213ENST00000492793 KRI1Q8N9T8 703 aaKnown RBP8.56□□□□□ -1.04
CLK1-213ENST00000492793 SLC24A3Q9HC58 644 aa8.56□□□□□ -1.04
CLK1-213ENST00000492793 SLC34A2O95436 690 aa8.54□□□□□ -1.04
CLK1-213ENST00000492793 MAMSTRQ6ZN01 415 aa8.54□□□□□ -1.04
CLK1-213ENST00000492793 POTEJP0CG39 1038 aa8.53□□□□□ -1.04
CLK1-213ENST00000492793 PCDHGA4Q9Y5G9 962 aa8.53□□□□□ -1.04
CLK1-213ENST00000492793 ZMYND10O75800 440 aa8.52□□□□□ -1.05
CLK1-213ENST00000492793 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
CLK1-213ENST00000492793 RIMBP2O15034 1052 aa8.51□□□□□ -1.05
CLK1-213ENST00000492793 PTGER2P43116 358 aa8.51□□□□□ -1.05
CLK1-213ENST00000492793 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
CLK1-213ENST00000492793 OSBPP22059 807 aa8.5□□□□□ -1.05
CLK1-213ENST00000492793 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
CLK1-213ENST00000492793 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
CLK1-213ENST00000492793 MAP3K7O43318 606 aa8.47□□□□□ -1.05
CLK1-213ENST00000492793 NUDT7P0C024 238 aa8.47□□□□□ -1.05
CLK1-213ENST00000492793 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
CLK1-213ENST00000492793 ARSIQ5FYB1 569 aa8.47□□□□□ -1.05
CLK1-213ENST00000492793 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.058e-10■■■□□ 19
CLK1-213ENST00000492793 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
CLK1-213ENST00000492793 PHF14O94880 888 aa8.46□□□□□ -1.06
CLK1-213ENST00000492793 EPAS1Q99814 870 aa8.46□□□□□ -1.06
CLK1-213ENST00000492793 FCHSD2O94868 740 aa8.45□□□□□ -1.06
CLK1-213ENST00000492793 AK7Q96M32 723 aa8.45□□□□□ -1.06
CLK1-213ENST00000492793 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
CLK1-213ENST00000492793 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
CLK1-213ENST00000492793 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
CLK1-213ENST00000492793 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
CLK1-213ENST00000492793 TYW1BQ6NUM6 668 aa8.43□□□□□ -1.06
CLK1-213ENST00000492793 PCDHGA10Q9Y5H3 936 aa8.43□□□□□ -1.06
CLK1-213ENST00000492793 SNPHO15079 494 aa8.42□□□□□ -1.06
CLK1-213ENST00000492793 GNPATO15228 680 aa8.42□□□□□ -1.06
CLK1-213ENST00000492793 HIC1Q14526 733 aa8.42□□□□□ -1.06
CLK1-213ENST00000492793 GPR37O15354 613 aa8.41□□□□□ -1.06
CLK1-213ENST00000492793 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
CLK1-213ENST00000492793 JPH4Q96JJ6 628 aa8.41□□□□□ -1.06
CLK1-213ENST00000492793 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
CLK1-213ENST00000492793 ZSWIM6Q9HCJ5 1215 aa8.41□□□□□ -1.06
CLK1-213ENST00000492793 FBXW7Q969H0 707 aa8.4□□□□□ -1.06
CLK1-213ENST00000492793 PLSCR2Q9NRY7 297 aa8.4□□□□□ -1.06
CLK1-213ENST00000492793 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
CLK1-213ENST00000492793 GPR153Q6NV75 609 aa8.39□□□□□ -1.07
CLK1-213ENST00000492793 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
CLK1-213ENST00000492793 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
CLK1-213ENST00000492793 POTEMA6NI47 508 aa8.38□□□□□ -1.07
CLK1-213ENST00000492793 FECHP22830 423 aa8.38□□□□□ -1.07
CLK1-213ENST00000492793 FOSBP53539 338 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms