RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
CSTF1-205ENST00000490539 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
CSTF1-205ENST00000490539 ERBB3P21860 1342 aa9.85□□□□□ -0.83
CSTF1-205ENST00000490539 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
CSTF1-205ENST00000490539 BCL11BQ9C0K0 894 aaPredicted RBP9.84□□□□□ -0.83
CSTF1-205ENST00000490539 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
CSTF1-205ENST00000490539 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
CSTF1-205ENST00000490539 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
CSTF1-205ENST00000490539 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
CSTF1-205ENST00000490539 SOX12O15370 315 aa9.77□□□□□ -0.85
CSTF1-205ENST00000490539 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
CSTF1-205ENST00000490539 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
CSTF1-205ENST00000490539 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
CSTF1-205ENST00000490539 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
CSTF1-205ENST00000490539 NLRP6P59044 892 aa9.72□□□□□ -0.85
CSTF1-205ENST00000490539 RYDENQ9NUL5 291 aaKnown RBP9.72□□□□□ -0.85
CSTF1-205ENST00000490539 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
CSTF1-205ENST00000490539 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
CSTF1-205ENST00000490539 PTGER2P43116 358 aa9.68□□□□□ -0.86
CSTF1-205ENST00000490539 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
CSTF1-205ENST00000490539 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
CSTF1-205ENST00000490539 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
CSTF1-205ENST00000490539 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
CSTF1-205ENST00000490539 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
CSTF1-205ENST00000490539 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
CSTF1-205ENST00000490539 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
CSTF1-205ENST00000490539 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
CSTF1-205ENST00000490539 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
CSTF1-205ENST00000490539 MS4A4AQ96JQ5 239 aa9.59□□□□□ -0.87
CSTF1-205ENST00000490539 FBXO22Q8NEZ5 403 aa9.58□□□□□ -0.88
CSTF1-205ENST00000490539 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
CSTF1-205ENST00000490539 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
CSTF1-205ENST00000490539 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
CSTF1-205ENST00000490539 LSM11P83369 360 aaKnown RBP eCLIP9.54□□□□□ -0.88
CSTF1-205ENST00000490539 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSTF1-205ENST00000490539 GTPBP6O43824 516 aaPredicted RBP9.51□□□□□ -0.89
CSTF1-205ENST00000490539 PAXIP1Q6ZW49 1069 aaPredicted RBP9.49□□□□□ -0.89
CSTF1-205ENST00000490539 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
CSTF1-205ENST00000490539 PBX2P40425 430 aa9.48□□□□□ -0.89
CSTF1-205ENST00000490539 PPP1R37O75864 691 aa9.46□□□□□ -0.9
CSTF1-205ENST00000490539 NUDT7P0C024 238 aa9.44□□□□□ -0.9
CSTF1-205ENST00000490539 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
CSTF1-205ENST00000490539 TMC2Q8TDI7 906 aa9.42□□□□□ -0.9
CSTF1-205ENST00000490539 HCSTQ9UBK5 93 aa9.42□□□□□ -0.9
CSTF1-205ENST00000490539 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
CSTF1-205ENST00000490539 KIF3CO14782 793 aa9.41□□□□□ -0.9
CSTF1-205ENST00000490539 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
CSTF1-205ENST00000490539 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
CSTF1-205ENST00000490539 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
CSTF1-205ENST00000490539 SLC34A2O95436 690 aa9.38□□□□□ -0.91
CSTF1-205ENST00000490539 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
CSTF1-205ENST00000490539 PDE4AP27815 886 aa9.37□□□□□ -0.91
CSTF1-205ENST00000490539 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
CSTF1-205ENST00000490539 ADGRD1Q6QNK2 874 aa9.35□□□□□ -0.91
CSTF1-205ENST00000490539 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
CSTF1-205ENST00000490539 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-205ENST00000490539 GPHNQ9NQX3 736 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-205ENST00000490539 TK2O00142 265 aa9.28□□□□□ -0.92
CSTF1-205ENST00000490539 FOXK1P85037 733 aa9.28□□□□□ -0.92
CSTF1-205ENST00000490539 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
CSTF1-205ENST00000490539 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
CSTF1-205ENST00000490539 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
CSTF1-205ENST00000490539 DDX27Q96GQ7 796 aaKnown RBP9.27□□□□□ -0.93
CSTF1-205ENST00000490539 HRO43593 1189 aa9.25□□□□□ -0.93
CSTF1-205ENST00000490539 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
CSTF1-205ENST00000490539 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
CSTF1-205ENST00000490539 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
CSTF1-205ENST00000490539 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
CSTF1-205ENST00000490539 DSG2Q14126 1118 aa9.24□□□□□ -0.93
CSTF1-205ENST00000490539 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
CSTF1-205ENST00000490539 PSEN2P49810 448 aa9.23□□□□□ -0.93
CSTF1-205ENST00000490539 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CSTF1-205ENST00000490539 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
CSTF1-205ENST00000490539 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
CSTF1-205ENST00000490539 KDM4FA0A1W2PPD8 638 aa9.22□□□□□ -0.93
CSTF1-205ENST00000490539 TBC1D12O60347 775 aa9.22□□□□□ -0.93
CSTF1-205ENST00000490539 PTCD2Q8WV60 388 aaKnown RBP9.22□□□□□ -0.93
CSTF1-205ENST00000490539 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
CSTF1-205ENST00000490539 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
CSTF1-205ENST00000490539 MFSD10Q14728 455 aa9.2□□□□□ -0.94
CSTF1-205ENST00000490539 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
CSTF1-205ENST00000490539 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
CSTF1-205ENST00000490539 RGS20O76081 388 aa9.13□□□□□ -0.95
CSTF1-205ENST00000490539 PTPN5P54829 565 aa9.13□□□□□ -0.95
CSTF1-205ENST00000490539 E2F4Q16254 413 aa9.13□□□□□ -0.95
CSTF1-205ENST00000490539 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
CSTF1-205ENST00000490539 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
CSTF1-205ENST00000490539 CECR2Q9BXF3 1484 aa9.12□□□□□ -0.95
CSTF1-205ENST00000490539 VSIG10Q8N0Z9 540 aa9.11□□□□□ -0.95
CSTF1-205ENST00000490539 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
CSTF1-205ENST00000490539 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
CSTF1-205ENST00000490539 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
CSTF1-205ENST00000490539 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
CSTF1-205ENST00000490539 OXER1Q8TDS5 423 aa9.09□□□□□ -0.95
CSTF1-205ENST00000490539 RB1CC1Q8TDY2 1594 aa9.08□□□□□ -0.96
CSTF1-205ENST00000490539 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
CSTF1-205ENST00000490539 CUX2O14529 1486 aa9.08□□□□□ -0.96
CSTF1-205ENST00000490539 NACADO15069 1562 aa9.07□□□□□ -0.96
CSTF1-205ENST00000490539 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
CSTF1-205ENST00000490539 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms