RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 TRIM35Q9UPQ4 493 aa8.75□□□□□ -1.01
PTPRK-213ENST00000490332 ST18O60284 1047 aa8.74□□□□□ -1.01
PTPRK-213ENST00000490332 ABCC10Q5T3U5 1492 aa8.74□□□□□ -1.01
PTPRK-213ENST00000490332 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
PTPRK-213ENST00000490332 SNAPC4Q5SXM2 1469 aa8.73□□□□□ -1.01
PTPRK-213ENST00000490332 MAGI1Q96QZ7 1491 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-213ENST00000490332 FAM69CQ0P6D2 419 aa8.73□□□□□ -1.01
PTPRK-213ENST00000490332 MIER1Q8N108 512 aa8.72□□□□□ -1.01
PTPRK-213ENST00000490332 DNMBPQ6XZF7 1577 aa8.71□□□□□ -1.02
PTPRK-213ENST00000490332 SLAIN1Q8ND83 568 aa8.71□□□□□ -1.02
PTPRK-213ENST00000490332 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
PTPRK-213ENST00000490332 SPATA31D1Q6ZQQ2 1576 aa8.7□□□□□ -1.02
PTPRK-213ENST00000490332 PCDHB13Q9Y5F0 798 aa8.7□□□□□ -1.02
PTPRK-213ENST00000490332 DIP2BQ9P265 1576 aa8.69□□□□□ -1.02
PTPRK-213ENST00000490332 MAPKBP1O60336 1514 aa8.67□□□□□ -1.02
PTPRK-213ENST00000490332 PLEKHG5O94827 1062 aa8.67□□□□□ -1.02
PTPRK-213ENST00000490332 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
PTPRK-213ENST00000490332 NUBP1P53384 320 aa8.66□□□□□ -1.02
PTPRK-213ENST00000490332 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
PTPRK-213ENST00000490332 WIZO95785 1651 aa8.65□□□□□ -1.03
PTPRK-213ENST00000490332 TSPOAP1O95153 1857 aa8.64□□□□□ -1.03
PTPRK-213ENST00000490332 IRX5P78411 483 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-213ENST00000490332 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
PTPRK-213ENST00000490332 POLA1P09884 1462 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-213ENST00000490332 SPNS2Q8IVW8 549 aa8.63□□□□□ -1.03
PTPRK-213ENST00000490332 TMEM106CQ9BVX2 250 aa8.63□□□□□ -1.03
PTPRK-213ENST00000490332 GRIN2BQ13224 1484 aa8.63□□□□□ -1.03
PTPRK-213ENST00000490332 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
PTPRK-213ENST00000490332 PLCG2P16885 1265 aa8.61□□□□□ -1.03
PTPRK-213ENST00000490332 CEP170Q5SW79 1584 aa8.61□□□□□ -1.03
PTPRK-213ENST00000490332 PLCD3Q8N3E9 789 aa8.59□□□□□ -1.03
PTPRK-213ENST00000490332 SOGA1O94964 1423 aa8.58□□□□□ -1.04
PTPRK-213ENST00000490332 TMEM121BQ9BXQ6 578 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-213ENST00000490332 SHROOM2Q13796 1616 aa8.57□□□□□ -1.04
PTPRK-213ENST00000490332 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
PTPRK-213ENST00000490332 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
PTPRK-213ENST00000490332 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
PTPRK-213ENST00000490332 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
PTPRK-213ENST00000490332 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
PTPRK-213ENST00000490332 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
PTPRK-213ENST00000490332 PBRM1Q86U86 1689 aa8.53□□□□□ -1.04
PTPRK-213ENST00000490332 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
PTPRK-213ENST00000490332 ZBTB47Q9UFB7 747 aaPredicted RBP8.53□□□□□ -1.04
PTPRK-213ENST00000490332 SNPHO15079 494 aa8.51□□□□□ -1.05
PTPRK-213ENST00000490332 NUP160Q12769 1436 aa8.51□□□□□ -1.05
PTPRK-213ENST00000490332 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.5□□□□□ -1.05
PTPRK-213ENST00000490332 GRIN2AQ12879 1464 aa8.5□□□□□ -1.05
PTPRK-213ENST00000490332 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
PTPRK-213ENST00000490332 PPRC1Q5VV67 1664 aaKnown RBP8.49□□□□□ -1.05
PTPRK-213ENST00000490332 ADCY10Q96PN6 1610 aa8.47□□□□□ -1.05
PTPRK-213ENST00000490332 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
PTPRK-213ENST00000490332 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
PTPRK-213ENST00000490332 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
PTPRK-213ENST00000490332 GLI2P10070 1586 aa8.47□□□□□ -1.05
PTPRK-213ENST00000490332 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-213ENST00000490332 FGD5Q6ZNL6 1462 aa8.46□□□□□ -1.05
PTPRK-213ENST00000490332 PYGBP11216 843 aa8.46□□□□□ -1.06
PTPRK-213ENST00000490332 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
PTPRK-213ENST00000490332 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
PTPRK-213ENST00000490332 PCDHB8Q9UN66 801 aa8.46□□□□□ -1.06
PTPRK-213ENST00000490332 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
PTPRK-213ENST00000490332 COL17A1Q9UMD9 1497 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-213ENST00000490332 PTPRMP28827 1452 aa8.43□□□□□ -1.06
PTPRK-213ENST00000490332 EMP3P54852 163 aa8.42□□□□□ -1.06
PTPRK-213ENST00000490332 ABCA5Q8WWZ7 1642 aa8.41□□□□□ -1.06
PTPRK-213ENST00000490332 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
PTPRK-213ENST00000490332 ADAMTS12P58397 1594 aa8.4□□□□□ -1.06
PTPRK-213ENST00000490332 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
PTPRK-213ENST00000490332 PLB1Q6P1J6 1458 aa8.4□□□□□ -1.06
PTPRK-213ENST00000490332 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
PTPRK-213ENST00000490332 JPH4Q96JJ6 628 aa8.39□□□□□ -1.07
PTPRK-213ENST00000490332 ADAMTSL3P82987 1691 aa8.37□□□□□ -1.07
PTPRK-213ENST00000490332 FAM205CA6NFA0 338 aa8.37□□□□□ -1.07
PTPRK-213ENST00000490332 C3orf67Q6ZVT6 689 aa8.37□□□□□ -1.07
PTPRK-213ENST00000490332 KIAA0586Q9BVV6 1533 aa8.37□□□□□ -1.07
PTPRK-213ENST00000490332 KIF21BO75037 1637 aa8.36□□□□□ -1.07
PTPRK-213ENST00000490332 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
PTPRK-213ENST00000490332 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
PTPRK-213ENST00000490332 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
PTPRK-213ENST00000490332 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-213ENST00000490332 ASXL2Q76L83 1435 aa8.35□□□□□ -1.07
PTPRK-213ENST00000490332 IQSEC2Q5JU85 1478 aa8.33□□□□□ -1.08
PTPRK-213ENST00000490332 ABCC2Q92887 1545 aa8.33□□□□□ -1.08
PTPRK-213ENST00000490332 MKRN3Q13064 507 aaKnown RBP8.32□□□□□ -1.08
PTPRK-213ENST00000490332 CUX1P39880 1505 aa8.31□□□□□ -1.08
PTPRK-213ENST00000490332 HSPA2P54652 639 aa8.31□□□□□ -1.08
PTPRK-213ENST00000490332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.31□□□□□ -1.081e-9■■□□□ 13.6
PTPRK-213ENST00000490332 EPRSP07814 1512 aaKnown RBP8.3□□□□□ -1.08
PTPRK-213ENST00000490332 RUSC2Q8N2Y8 1516 aa8.3□□□□□ -1.08
PTPRK-213ENST00000490332 HOXB3P14651 431 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-213ENST00000490332 ZNF467Q7Z7K2 595 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-213ENST00000490332 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
PTPRK-213ENST00000490332 GOLGA2Q08379 1002 aa8.28□□□□□ -1.08
PTPRK-213ENST00000490332 BCORL1Q5H9F3 1711 aa8.28□□□□□ -1.08
PTPRK-213ENST00000490332 MADDQ8WXG6 1647 aa8.28□□□□□ -1.08
PTPRK-213ENST00000490332 PSEN1P49768 467 aa8.27□□□□□ -1.09
PTPRK-213ENST00000490332 FKBP8Q14318 412 aa8.27□□□□□ -1.09
PTPRK-213ENST00000490332 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-213ENST00000490332 ERICH3Q5RHP9 1530 aa8.26□□□□□ -1.09
PTPRK-213ENST00000490332 CHRM1P11229 460 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms