RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 POGZQ7Z3K3 1410 aa13.63□□□□□ -0.23
SMG5-205ENST00000489907 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
SMG5-205ENST00000489907 KIF14Q15058 1648 aa13.62□□□□□ -0.23
SMG5-205ENST00000489907 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
SMG5-205ENST00000489907 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
SMG5-205ENST00000489907 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
SMG5-205ENST00000489907 HSPA2P54652 639 aa13.59□□□□□ -0.23
SMG5-205ENST00000489907 ATP10AO60312 1499 aa13.59□□□□□ -0.23
SMG5-205ENST00000489907 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
SMG5-205ENST00000489907 CDC42BPBQ9Y5S2 1711 aa13.58□□□□□ -0.24
SMG5-205ENST00000489907 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
SMG5-205ENST00000489907 KDM5CP41229 1560 aa13.57□□□□□ -0.24
SMG5-205ENST00000489907 TROQ12816 1431 aaPredicted RBP13.56□□□□□ -0.24
SMG5-205ENST00000489907 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
SMG5-205ENST00000489907 MLECQ14165 292 aa13.55□□□□□ -0.24
SMG5-205ENST00000489907 AFAP1Q8N556 730 aa13.55□□□□□ -0.24
SMG5-205ENST00000489907 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
SMG5-205ENST00000489907 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
SMG5-205ENST00000489907 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
SMG5-205ENST00000489907 ZNF518AQ6AHZ1 1483 aa13.53□□□□□ -0.24
SMG5-205ENST00000489907 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
SMG5-205ENST00000489907 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
SMG5-205ENST00000489907 REREQ9P2R6 1566 aa13.52□□□□□ -0.25
SMG5-205ENST00000489907 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.25
SMG5-205ENST00000489907 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.25
SMG5-205ENST00000489907 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
SMG5-205ENST00000489907 CEBPAP49715 358 aaPredicted RBP13.51□□□□□ -0.25
SMG5-205ENST00000489907 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
SMG5-205ENST00000489907 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
SMG5-205ENST00000489907 MLH3Q9UHC1 1453 aa13.5□□□□□ -0.25
SMG5-205ENST00000489907 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
SMG5-205ENST00000489907 CDC42BPAQ5VT25 1732 aa13.49□□□□□ -0.25
SMG5-205ENST00000489907 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
SMG5-205ENST00000489907 KIDINS220Q9ULH0 1771 aa13.48□□□□□ -0.25
SMG5-205ENST00000489907 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 C3P01024 1663 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 ABCC1P33527 1531 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 AGLP35573 1532 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 CLIP1P30622 1438 aa13.47□□□□□ -0.25
SMG5-205ENST00000489907 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
SMG5-205ENST00000489907 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
SMG5-205ENST00000489907 UHRF1BP1Q6BDS2 1440 aa13.4□□□□□ -0.26
SMG5-205ENST00000489907 GPATCH8Q9UKJ3 1502 aaKnown RBP13.4□□□□□ -0.26
SMG5-205ENST00000489907 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
SMG5-205ENST00000489907 PTPRTO14522 1441 aa13.38□□□□□ -0.27
SMG5-205ENST00000489907 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
SMG5-205ENST00000489907 MROH2AA6NES4 1674 aa13.37□□□□□ -0.27
SMG5-205ENST00000489907 LTBP4Q8N2S1 1624 aa13.36□□□□□ -0.27
SMG5-205ENST00000489907 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
SMG5-205ENST00000489907 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
SMG5-205ENST00000489907 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.27
SMG5-205ENST00000489907 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
SMG5-205ENST00000489907 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
SMG5-205ENST00000489907 CNTLNQ9NXG0 1405 aa13.34□□□□□ -0.27
SMG5-205ENST00000489907 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
SMG5-205ENST00000489907 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
SMG5-205ENST00000489907 ZMYM3Q14202 1370 aa13.32□□□□□ -0.28
SMG5-205ENST00000489907 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
SMG5-205ENST00000489907 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
SMG5-205ENST00000489907 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
SMG5-205ENST00000489907 NPATQ14207 1427 aa13.31□□□□□ -0.28
SMG5-205ENST00000489907 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
SMG5-205ENST00000489907 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
SMG5-205ENST00000489907 MBD5Q9P267 1494 aa13.29□□□□□ -0.28
SMG5-205ENST00000489907 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
SMG5-205ENST00000489907 A2MP01023 1474 aa13.29□□□□□ -0.28
SMG5-205ENST00000489907 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
SMG5-205ENST00000489907 CFDP1Q9UEE9 299 aaPredicted RBP13.28□□□□□ -0.28
SMG5-205ENST00000489907 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
SMG5-205ENST00000489907 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
SMG5-205ENST00000489907 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
SMG5-205ENST00000489907 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
SMG5-205ENST00000489907 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
SMG5-205ENST00000489907 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.29
SMG5-205ENST00000489907 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
SMG5-205ENST00000489907 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
SMG5-205ENST00000489907 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
SMG5-205ENST00000489907 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
SMG5-205ENST00000489907 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
SMG5-205ENST00000489907 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
SMG5-205ENST00000489907 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
SMG5-205ENST00000489907 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
SMG5-205ENST00000489907 MTUS2Q5JR59 1369 aa13.23□□□□□ -0.29
SMG5-205ENST00000489907 GGT6Q6P531 493 aa13.23□□□□□ -0.29
SMG5-205ENST00000489907 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
SMG5-205ENST00000489907 CEP170BQ9Y4F5 1589 aaPredicted RBP13.23□□□□□ -0.29
SMG5-205ENST00000489907 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
SMG5-205ENST00000489907 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
SMG5-205ENST00000489907 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
SMG5-205ENST00000489907 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.3
SMG5-205ENST00000489907 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
SMG5-205ENST00000489907 ZNF335Q9H4Z2 1342 aaPredicted RBP13.2□□□□□ -0.3
SMG5-205ENST00000489907 PKD2Q13563 968 aa13.19□□□□□ -0.3
SMG5-205ENST00000489907 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
SMG5-205ENST00000489907 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
SMG5-205ENST00000489907 FBXO31Q5XUX0 539 aaPredicted RBP13.16□□□□□ -0.3
SMG5-205ENST00000489907 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
SMG5-205ENST00000489907 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms