RNA–Protein interactions for RNA: ENST00000489621.1

PDCL3P4-201, Transcript of phosducin-like 3 pseudogene 4, humanhuman

BASIC

Gene PDCL3P4, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P4-201ENST00000489621 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
PDCL3P4-201ENST00000489621 PPP1R37O75864 691 aa10.87□□□□□ -0.67
PDCL3P4-201ENST00000489621 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
PDCL3P4-201ENST00000489621 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
PDCL3P4-201ENST00000489621 EMP3P54852 163 aa10.86□□□□□ -0.67
PDCL3P4-201ENST00000489621 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
PDCL3P4-201ENST00000489621 TMC2Q8TDI7 906 aa10.84□□□□□ -0.67
PDCL3P4-201ENST00000489621 RB1CC1Q8TDY2 1594 aa10.83□□□□□ -0.68
PDCL3P4-201ENST00000489621 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
PDCL3P4-201ENST00000489621 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
PDCL3P4-201ENST00000489621 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
PDCL3P4-201ENST00000489621 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
PDCL3P4-201ENST00000489621 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
PDCL3P4-201ENST00000489621 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
PDCL3P4-201ENST00000489621 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
PDCL3P4-201ENST00000489621 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
PDCL3P4-201ENST00000489621 KIF3CO14782 793 aa10.77□□□□□ -0.69
PDCL3P4-201ENST00000489621 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
PDCL3P4-201ENST00000489621 ERBB3P21860 1342 aa10.74□□□□□ -0.69
PDCL3P4-201ENST00000489621 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
PDCL3P4-201ENST00000489621 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
PDCL3P4-201ENST00000489621 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
PDCL3P4-201ENST00000489621 GPR153Q6NV75 609 aa10.71□□□□□ -0.69
PDCL3P4-201ENST00000489621 GPHNQ9NQX3 736 aaPredicted RBP10.69□□□□□ -0.7
PDCL3P4-201ENST00000489621 NACADO15069 1562 aa10.68□□□□□ -0.7
PDCL3P4-201ENST00000489621 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
PDCL3P4-201ENST00000489621 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
PDCL3P4-201ENST00000489621 SLC34A2O95436 690 aa10.66□□□□□ -0.7
PDCL3P4-201ENST00000489621 FOXK1P85037 733 aa10.65□□□□□ -0.7
PDCL3P4-201ENST00000489621 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
PDCL3P4-201ENST00000489621 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
PDCL3P4-201ENST00000489621 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDCL3P4-201ENST00000489621 BBXQ8WY36 941 aaPredicted RBP10.64□□□□□ -0.71
PDCL3P4-201ENST00000489621 DSG2Q14126 1118 aa10.63□□□□□ -0.71
PDCL3P4-201ENST00000489621 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
PDCL3P4-201ENST00000489621 NUDT7P0C024 238 aa10.61□□□□□ -0.71
PDCL3P4-201ENST00000489621 PDE4AP27815 886 aa10.61□□□□□ -0.71
PDCL3P4-201ENST00000489621 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
PDCL3P4-201ENST00000489621 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
PDCL3P4-201ENST00000489621 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.59□□□□□ -0.71
PDCL3P4-201ENST00000489621 TBC1D12O60347 775 aa10.58□□□□□ -0.72
PDCL3P4-201ENST00000489621 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
PDCL3P4-201ENST00000489621 ZNF687Q8N1G0 1237 aa10.57□□□□□ -0.72
PDCL3P4-201ENST00000489621 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
PDCL3P4-201ENST00000489621 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
PDCL3P4-201ENST00000489621 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
PDCL3P4-201ENST00000489621 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
PDCL3P4-201ENST00000489621 NCKAP5LQ9HCH0 1330 aa10.55□□□□□ -0.72
PDCL3P4-201ENST00000489621 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
PDCL3P4-201ENST00000489621 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
PDCL3P4-201ENST00000489621 LHX6Q9UPM6 363 aa10.54□□□□□ -0.72
PDCL3P4-201ENST00000489621 ZCCHC6Q5VYS8 1495 aaKnown RBP10.54□□□□□ -0.72
PDCL3P4-201ENST00000489621 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
PDCL3P4-201ENST00000489621 UPF1Q92900 1129 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDCL3P4-201ENST00000489621 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
PDCL3P4-201ENST00000489621 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
PDCL3P4-201ENST00000489621 OXER1Q8TDS5 423 aa10.48□□□□□ -0.73
PDCL3P4-201ENST00000489621 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
PDCL3P4-201ENST00000489621 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
PDCL3P4-201ENST00000489621 PAXIP1Q6ZW49 1069 aaPredicted RBP10.47□□□□□ -0.73
PDCL3P4-201ENST00000489621 DCAF1Q9Y4B6 1507 aa10.47□□□□□ -0.73
PDCL3P4-201ENST00000489621 BICRAQ9NZM4 1560 aa10.47□□□□□ -0.73
PDCL3P4-201ENST00000489621 UNC13AQ9UPW8 1703 aa10.47□□□□□ -0.73
PDCL3P4-201ENST00000489621 MFSD10Q14728 455 aa10.46□□□□□ -0.73
PDCL3P4-201ENST00000489621 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
PDCL3P4-201ENST00000489621 MYO15BQ96JP2 1530 aa10.44□□□□□ -0.74
PDCL3P4-201ENST00000489621 KDM4FA0A1W2PPD8 638 aa10.44□□□□□ -0.74
PDCL3P4-201ENST00000489621 PBX2P40425 430 aa10.44□□□□□ -0.74
PDCL3P4-201ENST00000489621 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
PDCL3P4-201ENST00000489621 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
PDCL3P4-201ENST00000489621 MAP3K9P80192 1104 aa10.42□□□□□ -0.74
PDCL3P4-201ENST00000489621 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
PDCL3P4-201ENST00000489621 LSM11P83369 360 aaKnown RBP eCLIP10.4□□□□□ -0.74
PDCL3P4-201ENST00000489621 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
PDCL3P4-201ENST00000489621 CC2D2AQ9P2K1 1620 aa10.38□□□□□ -0.75
PDCL3P4-201ENST00000489621 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
PDCL3P4-201ENST00000489621 EVI5O60447 810 aa10.38□□□□□ -0.75
PDCL3P4-201ENST00000489621 ZNF454Q8N9F8 522 aa10.37□□□□□ -0.75
PDCL3P4-201ENST00000489621 KCNH8Q96L42 1107 aa10.37□□□□□ -0.75
PDCL3P4-201ENST00000489621 PTGER2P43116 358 aa10.36□□□□□ -0.75
PDCL3P4-201ENST00000489621 EMILIN3Q9NT22 766 aa10.36□□□□□ -0.75
PDCL3P4-201ENST00000489621 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
PDCL3P4-201ENST00000489621 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
PDCL3P4-201ENST00000489621 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
PDCL3P4-201ENST00000489621 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
PDCL3P4-201ENST00000489621 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
PDCL3P4-201ENST00000489621 PSEN2P49810 448 aa10.31□□□□□ -0.76
PDCL3P4-201ENST00000489621 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
PDCL3P4-201ENST00000489621 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
PDCL3P4-201ENST00000489621 FOSBP53539 338 aa10.3□□□□□ -0.76
PDCL3P4-201ENST00000489621 JPH4Q96JJ6 628 aa10.3□□□□□ -0.76
PDCL3P4-201ENST00000489621 DPYSL4O14531 572 aa10.28□□□□□ -0.76
PDCL3P4-201ENST00000489621 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
PDCL3P4-201ENST00000489621 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
PDCL3P4-201ENST00000489621 EIF4G1Q04637 1599 aaKnown RBP10.27□□□□□ -0.76
PDCL3P4-201ENST00000489621 ZDHHC16Q969W1 377 aa10.27□□□□□ -0.77
PDCL3P4-201ENST00000489621 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
PDCL3P4-201ENST00000489621 TK2O00142 265 aa10.26□□□□□ -0.77
PDCL3P4-201ENST00000489621 PTPREP23469 700 aa10.26□□□□□ -0.77
PDCL3P4-201ENST00000489621 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms