RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 PDCD7Q8N8D1 485 aaKnown RBP15.78■□□□□ 0.12
TNRC6B-208ENST00000489500 ZNF608Q9ULD9 1512 aaPredicted RBP15.77■□□□□ 0.11
TNRC6B-208ENST00000489500 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
TNRC6B-208ENST00000489500 CABP2Q9NPB3 220 aa15.76■□□□□ 0.11
TNRC6B-208ENST00000489500 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
TNRC6B-208ENST00000489500 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
TNRC6B-208ENST00000489500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.74■□□□□ 0.114e-13■■■□□ 16.9
TNRC6B-208ENST00000489500 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
TNRC6B-208ENST00000489500 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
TNRC6B-208ENST00000489500 LCE2DQ5TA82 110 aaPredicted RBP15.71■□□□□ 0.11
TNRC6B-208ENST00000489500 SLAIN1Q8ND83 568 aa15.71■□□□□ 0.11
TNRC6B-208ENST00000489500 FAM163AQ96GL9 167 aaPredicted RBP15.71■□□□□ 0.11
TNRC6B-208ENST00000489500 SOGA1O94964 1423 aa15.7■□□□□ 0.1
TNRC6B-208ENST00000489500 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
TNRC6B-208ENST00000489500 RIOK3O14730 519 aaKnown RBP15.68■□□□□ 0.1
TNRC6B-208ENST00000489500 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.17e-9■■■■□ 20.6
TNRC6B-208ENST00000489500 ILDR1Q86SU0 546 aaPredicted RBP15.67■□□□□ 0.1
TNRC6B-208ENST00000489500 POTEMA6NI47 508 aa15.66■□□□□ 0.1
TNRC6B-208ENST00000489500 CHD1O14646 1710 aa15.65■□□□□ 0.1
TNRC6B-208ENST00000489500 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
TNRC6B-208ENST00000489500 DPY19L2Q6NUT2 758 aa15.65■□□□□ 0.1
TNRC6B-208ENST00000489500 POTEGQ6S5H5 508 aa15.63■□□□□ 0.09
TNRC6B-208ENST00000489500 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
TNRC6B-208ENST00000489500 CUX1P39880 1505 aa15.62■□□□□ 0.09
TNRC6B-208ENST00000489500 RIMBP3CA6NJZ7 1639 aa15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 RIMBP3BA6NNM3 1639 aa15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 RIMBP3Q9UFD9 1639 aa15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 EFCAB3Q8N7B9 438 aa15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 ZFP91Q96JP5 570 aaPredicted RBP15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
TNRC6B-208ENST00000489500 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
TNRC6B-208ENST00000489500 VGFO15240 615 aaPredicted RBP15.58■□□□□ 0.08
TNRC6B-208ENST00000489500 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
TNRC6B-208ENST00000489500 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
TNRC6B-208ENST00000489500 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
TNRC6B-208ENST00000489500 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
TNRC6B-208ENST00000489500 PKD2Q13563 968 aa15.55■□□□□ 0.08
TNRC6B-208ENST00000489500 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
TNRC6B-208ENST00000489500 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
TNRC6B-208ENST00000489500 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
TNRC6B-208ENST00000489500 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
TNRC6B-208ENST00000489500 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
TNRC6B-208ENST00000489500 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
TNRC6B-208ENST00000489500 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
TNRC6B-208ENST00000489500 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
TNRC6B-208ENST00000489500 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
TNRC6B-208ENST00000489500 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
TNRC6B-208ENST00000489500 BOLA1Q9Y3E2 137 aa15.48■□□□□ 0.07
TNRC6B-208ENST00000489500 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
TNRC6B-208ENST00000489500 ST18O60284 1047 aa15.47■□□□□ 0.07
TNRC6B-208ENST00000489500 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
TNRC6B-208ENST00000489500 RGL2O15211 777 aa15.45■□□□□ 0.06
TNRC6B-208ENST00000489500 ABCA5Q8WWZ7 1642 aa15.45■□□□□ 0.06
TNRC6B-208ENST00000489500 BCL11BQ9C0K0 894 aaPredicted RBP15.44■□□□□ 0.06
TNRC6B-208ENST00000489500 SOX12O15370 315 aa15.43■□□□□ 0.06
TNRC6B-208ENST00000489500 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
TNRC6B-208ENST00000489500 MS4A4AQ96JQ5 239 aa15.42■□□□□ 0.06
TNRC6B-208ENST00000489500 G3V3G9 751 aa15.41■□□□□ 0.06
TNRC6B-208ENST00000489500 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
TNRC6B-208ENST00000489500 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
TNRC6B-208ENST00000489500 TMEM121BQ9BXQ6 578 aaPredicted RBP15.39■□□□□ 0.05
TNRC6B-208ENST00000489500 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
TNRC6B-208ENST00000489500 SNPHO15079 494 aa15.38■□□□□ 0.05
TNRC6B-208ENST00000489500 ARAP1Q96P48 1450 aa15.38■□□□□ 0.05
TNRC6B-208ENST00000489500 PLSCR2Q9NRY7 297 aa15.37■□□□□ 0.05
TNRC6B-208ENST00000489500 STK25O00506 426 aa15.36■□□□□ 0.05
TNRC6B-208ENST00000489500 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.05
TNRC6B-208ENST00000489500 FHAD1B1AJZ9 1412 aa15.33■□□□□ 0.04
TNRC6B-208ENST00000489500 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
TNRC6B-208ENST00000489500 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
TNRC6B-208ENST00000489500 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
TNRC6B-208ENST00000489500 PCDH10Q9P2E7 1040 aa15.31■□□□□ 0.04
TNRC6B-208ENST00000489500 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
TNRC6B-208ENST00000489500 NLRP6P59044 892 aa15.29■□□□□ 0.04
TNRC6B-208ENST00000489500 MFRPQ9BY79 579 aa15.28■□□□□ 0.04
TNRC6B-208ENST00000489500 MARVELD3Q96A59 401 aa15.27■□□□□ 0.04
TNRC6B-208ENST00000489500 TMEM92Q6UXU6 159 aa15.26■□□□□ 0.03
TNRC6B-208ENST00000489500 NUP160Q12769 1436 aa15.25■□□□□ 0.03
TNRC6B-208ENST00000489500 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
TNRC6B-208ENST00000489500 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
TNRC6B-208ENST00000489500 HOXB3P14651 431 aaPredicted RBP15.22■□□□□ 0.03
TNRC6B-208ENST00000489500 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
TNRC6B-208ENST00000489500 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
TNRC6B-208ENST00000489500 CUL7Q14999 1698 aa15.18■□□□□ 0.02
TNRC6B-208ENST00000489500 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
TNRC6B-208ENST00000489500 EMP3P54852 163 aa15.13■□□□□ 0.01
TNRC6B-208ENST00000489500 PRG4Q92954 1404 aaPredicted RBP15.13■□□□□ 0.01
TNRC6B-208ENST00000489500 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
TNRC6B-208ENST00000489500 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
TNRC6B-208ENST00000489500 IGF1RP08069 1367 aa15.1■□□□□ 0.01
TNRC6B-208ENST00000489500 POTEB3A0JP26 581 aa15.09■□□□□ 0.01
TNRC6B-208ENST00000489500 DOK7Q18PE1 504 aa15.09■□□□□ 0.01
TNRC6B-208ENST00000489500 POTEBQ6S5H4 581 aa15.09■□□□□ 0.01
TNRC6B-208ENST00000489500 HS6ST3Q8IZP7 471 aa15.08■□□□□ 0
TNRC6B-208ENST00000489500 ZNF710Q8N1W2 664 aa15.08■□□□□ 0
TNRC6B-208ENST00000489500 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
TNRC6B-208ENST00000489500 PPP1R37O75864 691 aa15.07■□□□□ 0
TNRC6B-208ENST00000489500 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms