RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
ACTN4-206ENST00000489451 FMN1Q68DA7 1419 aa19.56■□□□□ 0.72
ACTN4-206ENST00000489451 KIF14Q15058 1648 aa19.55■□□□□ 0.72
ACTN4-206ENST00000489451 YEATS2Q9ULM3 1422 aa19.54■□□□□ 0.72
ACTN4-206ENST00000489451 HSPA2P54652 639 aa19.54■□□□□ 0.72
ACTN4-206ENST00000489451 PLCH2O75038 1416 aa19.53■□□□□ 0.72
ACTN4-206ENST00000489451 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
ACTN4-206ENST00000489451 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
ACTN4-206ENST00000489451 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
ACTN4-206ENST00000489451 SCAPERQ9BY12 1400 aa19.48■□□□□ 0.71
ACTN4-206ENST00000489451 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
ACTN4-206ENST00000489451 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
ACTN4-206ENST00000489451 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
ACTN4-206ENST00000489451 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
ACTN4-206ENST00000489451 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
ACTN4-206ENST00000489451 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
ACTN4-206ENST00000489451 KDM5CP41229 1560 aa19.4■□□□□ 0.7
ACTN4-206ENST00000489451 CASKIN1Q8WXD9 1431 aa19.39■□□□□ 0.69
ACTN4-206ENST00000489451 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.69
ACTN4-206ENST00000489451 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
ACTN4-206ENST00000489451 PREX2Q70Z35 1606 aa19.37■□□□□ 0.69
ACTN4-206ENST00000489451 ARHGEF12Q9NZN5 1544 aa19.37■□□□□ 0.69
ACTN4-206ENST00000489451 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
ACTN4-206ENST00000489451 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
ACTN4-206ENST00000489451 ATP10AO60312 1499 aa19.36■□□□□ 0.69
ACTN4-206ENST00000489451 CLIP1P30622 1438 aa19.35■□□□□ 0.69
ACTN4-206ENST00000489451 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
ACTN4-206ENST00000489451 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
ACTN4-206ENST00000489451 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
ACTN4-206ENST00000489451 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
ACTN4-206ENST00000489451 DIP2CQ9Y2E4 1556 aa19.33■□□□□ 0.69
ACTN4-206ENST00000489451 ABCC1P33527 1531 aa19.33■□□□□ 0.68
ACTN4-206ENST00000489451 ABCA6Q8N139 1617 aa19.33■□□□□ 0.68
ACTN4-206ENST00000489451 MLECQ14165 292 aa19.32■□□□□ 0.68
ACTN4-206ENST00000489451 AFAP1Q8N556 730 aa19.32■□□□□ 0.68
ACTN4-206ENST00000489451 PREX1Q8TCU6 1659 aa19.31■□□□□ 0.68
ACTN4-206ENST00000489451 ITSN2Q9NZM3 1697 aa19.31■□□□□ 0.68
ACTN4-206ENST00000489451 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
ACTN4-206ENST00000489451 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
ACTN4-206ENST00000489451 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
ACTN4-206ENST00000489451 MLH3Q9UHC1 1453 aa19.28■□□□□ 0.68
ACTN4-206ENST00000489451 STRCQ7RTU9 1775 aa19.27■□□□□ 0.67
ACTN4-206ENST00000489451 KIDINS220Q9ULH0 1771 aa19.26■□□□□ 0.67
ACTN4-206ENST00000489451 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
ACTN4-206ENST00000489451 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
ACTN4-206ENST00000489451 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
ACTN4-206ENST00000489451 AGLP35573 1532 aa19.21■□□□□ 0.67
ACTN4-206ENST00000489451 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
ACTN4-206ENST00000489451 SYCP2Q9BX26 1530 aa19.19■□□□□ 0.66
ACTN4-206ENST00000489451 C3P01024 1663 aa19.18■□□□□ 0.66
ACTN4-206ENST00000489451 IQSEC2Q5JU85 1478 aa19.18■□□□□ 0.66
ACTN4-206ENST00000489451 MYT1LQ9UL68 1186 aa19.13■□□□□ 0.65
ACTN4-206ENST00000489451 INO80Q9ULG1 1556 aaPredicted RBP19.13■□□□□ 0.65
ACTN4-206ENST00000489451 LTBP4Q8N2S1 1624 aa19.13■□□□□ 0.65
ACTN4-206ENST00000489451 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
ACTN4-206ENST00000489451 PTPRTO14522 1441 aa19.1■□□□□ 0.65
ACTN4-206ENST00000489451 SETD1BQ9UPS6 1966 aaKnown RBP19.1■□□□□ 0.65
ACTN4-206ENST00000489451 ZNF777Q9ULD5 760 aaPredicted RBP19.1■□□□□ 0.65
ACTN4-206ENST00000489451 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
ACTN4-206ENST00000489451 UHRF1BP1Q6BDS2 1440 aa19.09■□□□□ 0.65
ACTN4-206ENST00000489451 KIAA1107Q9UPP5 1409 aa19.09■□□□□ 0.65
ACTN4-206ENST00000489451 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.65
ACTN4-206ENST00000489451 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-206ENST00000489451 ATP7AQ04656 1500 aa19.09■□□□□ 0.65
ACTN4-206ENST00000489451 SUPT6HQ7KZ85 1726 aaKnown RBP19.08■□□□□ 0.64
ACTN4-206ENST00000489451 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
ACTN4-206ENST00000489451 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
ACTN4-206ENST00000489451 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
ACTN4-206ENST00000489451 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
ACTN4-206ENST00000489451 MROH2AA6NES4 1674 aa19.05■□□□□ 0.64
ACTN4-206ENST00000489451 PLEKHH2Q8IVE3 1493 aa19.05■□□□□ 0.64
ACTN4-206ENST00000489451 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
ACTN4-206ENST00000489451 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
ACTN4-206ENST00000489451 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
ACTN4-206ENST00000489451 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-206ENST00000489451 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
ACTN4-206ENST00000489451 A2MP01023 1474 aa19.02■□□□□ 0.63
ACTN4-206ENST00000489451 CLTCQ00610 1675 aaKnown RBP19.01■□□□□ 0.63
ACTN4-206ENST00000489451 UBAP1LF5GYI3 381 aa19■□□□□ 0.63
ACTN4-206ENST00000489451 ADGBQ8N7X0 1667 aa18.98■□□□□ 0.63
ACTN4-206ENST00000489451 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
ACTN4-206ENST00000489451 NPATQ14207 1427 aa18.97■□□□□ 0.63
ACTN4-206ENST00000489451 NCOA1Q15788 1441 aa18.96■□□□□ 0.63
ACTN4-206ENST00000489451 NCOA2Q15596 1464 aa18.96■□□□□ 0.63
ACTN4-206ENST00000489451 MYO3AQ8NEV4 1616 aa18.94■□□□□ 0.62
ACTN4-206ENST00000489451 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
ACTN4-206ENST00000489451 PTPRKQ15262 1439 aa18.93■□□□□ 0.62
ACTN4-206ENST00000489451 ZNF142P52746 1687 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-206ENST00000489451 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-206ENST00000489451 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
ACTN4-206ENST00000489451 RTEL1-TNFRSF6BF6WH68 1400 aa18.92■□□□□ 0.62
ACTN4-206ENST00000489451 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
ACTN4-206ENST00000489451 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
ACTN4-206ENST00000489451 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
ACTN4-206ENST00000489451 GGT6Q6P531 493 aa18.88■□□□□ 0.61
ACTN4-206ENST00000489451 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
ACTN4-206ENST00000489451 CEP170BQ9Y4F5 1589 aaPredicted RBP18.88■□□□□ 0.61
ACTN4-206ENST00000489451 DHX29Q7Z478 1369 aaKnown RBP18.87■□□□□ 0.61
ACTN4-206ENST00000489451 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
ACTN4-206ENST00000489451 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms