RNA–Protein interactions for RNA: ENST00000488943.1

REPIN1-213, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-213ENST00000488943 SCAPERQ9BY12 1400 aa34.12■■■■□ 3.05
REPIN1-213ENST00000488943 PLCH2O75038 1416 aa34.07■■■■□ 3.04
REPIN1-213ENST00000488943 CDK13Q14004 1512 aaKnown RBP34.06■■■■□ 3.04
REPIN1-213ENST00000488943 ATP10AO60312 1499 aa34.05■■■■□ 3.04
REPIN1-213ENST00000488943 PREX1Q8TCU6 1659 aa34.05■■■■□ 3.04
REPIN1-213ENST00000488943 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
REPIN1-213ENST00000488943 ARHGEF12Q9NZN5 1544 aa34.03■■■■□ 3.04
REPIN1-213ENST00000488943 EFCAB2Q5VUJ9 269 aa33.98■■■■□ 3.03
REPIN1-213ENST00000488943 MYO5CQ9NQX4 1742 aa33.98■■■■□ 3.03
REPIN1-213ENST00000488943 ATP1B4Q9UN42 357 aaPredicted RBP33.97■■■■□ 3.03
REPIN1-213ENST00000488943 DMRT2Q9Y5R5 561 aa33.97■■■■□ 3.03
REPIN1-213ENST00000488943 CEBPAP49715 358 aaPredicted RBP33.95■■■■□ 3.03
REPIN1-213ENST00000488943 CDK11AQ9UQ88 783 aaPredicted RBP33.91■■■■□ 3.02
REPIN1-213ENST00000488943 DISP3Q9P2K9 1392 aa33.9■■■■□ 3.02
REPIN1-213ENST00000488943 MYT1LQ9UL68 1186 aa33.9■■■■□ 3.02
REPIN1-213ENST00000488943 ZNF518AQ6AHZ1 1483 aa33.88■■■■□ 3.01
REPIN1-213ENST00000488943 UHRF1BP1Q6BDS2 1440 aa33.88■■■■□ 3.01
REPIN1-213ENST00000488943 FMN1Q68DA7 1419 aa33.86■■■■□ 3.01
REPIN1-213ENST00000488943 STRCQ7RTU9 1775 aa33.85■■■■□ 3.01
REPIN1-213ENST00000488943 KIF14Q15058 1648 aa33.83■■■■□ 3.01
REPIN1-213ENST00000488943 ARHGAP5Q13017 1502 aa33.83■■■■□ 3.01
REPIN1-213ENST00000488943 SETD1BQ9UPS6 1966 aaKnown RBP33.81■■■■□ 3
REPIN1-213ENST00000488943 AFAP1Q8N556 730 aa33.8■■■■□ 3
REPIN1-213ENST00000488943 KDM5CP41229 1560 aa33.79■■■■□ 3
REPIN1-213ENST00000488943 UBTFP17480 764 aaKnown RBP33.76■■■□□ 2.99
REPIN1-213ENST00000488943 ILDR2Q71H61 639 aa33.76■■■□□ 2.99
REPIN1-213ENST00000488943 ESF1Q9H501 851 aaKnown RBP33.76■■■□□ 2.99
REPIN1-213ENST00000488943 CLIP1P30622 1438 aa33.76■■■□□ 2.99
REPIN1-213ENST00000488943 DIP2CQ9Y2E4 1556 aa33.74■■■□□ 2.99
REPIN1-213ENST00000488943 TROQ12816 1431 aaPredicted RBP33.74■■■□□ 2.99
REPIN1-213ENST00000488943 SOCS7O14512 581 aa33.73■■■□□ 2.99
REPIN1-213ENST00000488943 EHMT2Q96KQ7 1210 aa33.73■■■□□ 2.99
REPIN1-213ENST00000488943 REREQ9P2R6 1566 aa33.72■■■□□ 2.99
REPIN1-213ENST00000488943 C3P01024 1663 aa33.71■■■□□ 2.99
REPIN1-213ENST00000488943 PTPRTO14522 1441 aa33.7■■■□□ 2.99
REPIN1-213ENST00000488943 ABCA6Q8N139 1617 aa33.68■■■□□ 2.98
REPIN1-213ENST00000488943 ARHGAP35Q9NRY4 1499 aa33.67■■■□□ 2.98
REPIN1-213ENST00000488943 MLH3Q9UHC1 1453 aa33.65■■■□□ 2.98
REPIN1-213ENST00000488943 SPATA31D1Q6ZQQ2 1576 aa33.64■■■□□ 2.98
REPIN1-213ENST00000488943 CDC42BPBQ9Y5S2 1711 aa33.63■■■□□ 2.97
REPIN1-213ENST00000488943 TRAPPC8Q9Y2L5 1435 aa33.62■■■□□ 2.97
REPIN1-213ENST00000488943 AGLP35573 1532 aa33.61■■■□□ 2.97
REPIN1-213ENST00000488943 LRRIQ1Q96JM4 1722 aa33.57■■■□□ 2.96
REPIN1-213ENST00000488943 PREX2Q70Z35 1606 aa33.57■■■□□ 2.96
REPIN1-213ENST00000488943 ABCC1P33527 1531 aa33.56■■■□□ 2.96
REPIN1-213ENST00000488943 ITSN2Q9NZM3 1697 aa33.55■■■□□ 2.96
REPIN1-213ENST00000488943 CNTLNQ9NXG0 1405 aa33.55■■■□□ 2.96
REPIN1-213ENST00000488943 LTBP4Q8N2S1 1624 aa33.54■■■□□ 2.96
REPIN1-213ENST00000488943 IQSEC2Q5JU85 1478 aa33.54■■■□□ 2.96
REPIN1-213ENST00000488943 NCOA1Q15788 1441 aa33.52■■■□□ 2.96
REPIN1-213ENST00000488943 KIDINS220Q9ULH0 1771 aa33.49■■■□□ 2.95
REPIN1-213ENST00000488943 CCDC18Q5T9S5 1454 aa33.45■■■□□ 2.95
REPIN1-213ENST00000488943 CAMSAP1Q5T5Y3 1602 aa33.44■■■□□ 2.94
REPIN1-213ENST00000488943 MROH2AA6NES4 1674 aa33.42■■■□□ 2.94
REPIN1-213ENST00000488943 NPATQ14207 1427 aa33.42■■■□□ 2.94
REPIN1-213ENST00000488943 CDC42BPAQ5VT25 1732 aa33.4■■■□□ 2.94
REPIN1-213ENST00000488943 ZNF777Q9ULD5 760 aaPredicted RBP33.38■■■□□ 2.93
REPIN1-213ENST00000488943 CASKIN1Q8WXD9 1431 aa33.36■■■□□ 2.93
REPIN1-213ENST00000488943 ZMYM3Q14202 1370 aa33.36■■■□□ 2.93
REPIN1-213ENST00000488943 SAMD9LQ8IVG5 1584 aa33.36■■■□□ 2.93
REPIN1-213ENST00000488943 SUPT6HQ7KZ85 1726 aaKnown RBP33.33■■■□□ 2.93
REPIN1-213ENST00000488943 NCKAP5LQ9HCH0 1330 aa33.33■■■□□ 2.93
REPIN1-213ENST00000488943 SPAG9O60271 1321 aaKnown RBP33.32■■■□□ 2.93
REPIN1-213ENST00000488943 UBAP1LF5GYI3 381 aa33.31■■■□□ 2.92
REPIN1-213ENST00000488943 ZNF335Q9H4Z2 1342 aaPredicted RBP33.29■■■□□ 2.92
REPIN1-213ENST00000488943 SYCP2Q9BX26 1530 aa33.29■■■□□ 2.92
REPIN1-213ENST00000488943 CLTCQ00610 1675 aaKnown RBP33.29■■■□□ 2.92
REPIN1-213ENST00000488943 PKD2Q13563 968 aa33.27■■■□□ 2.92
REPIN1-213ENST00000488943 MYO3AQ8NEV4 1616 aa33.26■■■□□ 2.91
REPIN1-213ENST00000488943 ZNF142P52746 1687 aaPredicted RBP33.25■■■□□ 2.91
REPIN1-213ENST00000488943 PLA2R1Q13018 1463 aa33.25■■■□□ 2.91
REPIN1-213ENST00000488943 HNRNPMP52272 730 aaKnown RBP eCLIP33.24■■■□□ 2.91
REPIN1-213ENST00000488943 ATP7AQ04656 1500 aa33.23■■■□□ 2.91
REPIN1-213ENST00000488943 CEP170BQ9Y4F5 1589 aaPredicted RBP33.21■■■□□ 2.91
REPIN1-213ENST00000488943 FYCO1Q9BQS8 1478 aa33.21■■■□□ 2.91
REPIN1-213ENST00000488943 GPATCH8Q9UKJ3 1502 aaKnown RBP33.2■■■□□ 2.91
REPIN1-213ENST00000488943 A2MP01023 1474 aa33.19■■■□□ 2.9
REPIN1-213ENST00000488943 GGT6Q6P531 493 aa33.19■■■□□ 2.9
REPIN1-213ENST00000488943 PLEKHH2Q8IVE3 1493 aa33.18■■■□□ 2.9
REPIN1-213ENST00000488943 PLXNC1O60486 1568 aa33.17■■■□□ 2.9
REPIN1-213ENST00000488943 PTPRKQ15262 1439 aa33.17■■■□□ 2.9
REPIN1-213ENST00000488943 TCOF1Q13428 1488 aaKnown RBP33.16■■■□□ 2.9
REPIN1-213ENST00000488943 INO80Q9ULG1 1556 aaPredicted RBP33.16■■■□□ 2.9
REPIN1-213ENST00000488943 CFDP1Q9UEE9 299 aaPredicted RBP33.15■■■□□ 2.9
REPIN1-213ENST00000488943 PPP6R1Q9UPN7 881 aa33.15■■■□□ 2.9
REPIN1-213ENST00000488943 KIAA1107Q9UPP5 1409 aa33.15■■■□□ 2.9
REPIN1-213ENST00000488943 CCNB3Q8WWL7 1395 aa33.1■■■□□ 2.89
REPIN1-213ENST00000488943 ADGBQ8N7X0 1667 aa33.08■■■□□ 2.89
REPIN1-213ENST00000488943 SCAF1Q9H7N4 1312 aaKnown RBP33.07■■■□□ 2.88
REPIN1-213ENST00000488943 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
REPIN1-213ENST00000488943 A2ML1A8K2U0 1454 aa33.04■■■□□ 2.88
REPIN1-213ENST00000488943 DNMT1P26358 1616 aaKnown RBP33.01■■■□□ 2.87
REPIN1-213ENST00000488943 PIP4K2BP78356 416 aa32.99■■■□□ 2.87
REPIN1-213ENST00000488943 MTUS2Q5JR59 1369 aa32.98■■■□□ 2.87
REPIN1-213ENST00000488943 TOM1O60784 492 aa32.98■■■□□ 2.87
REPIN1-213ENST00000488943 POLR1AO95602 1720 aaPredicted RBP32.97■■■□□ 2.87
REPIN1-213ENST00000488943 HSPA1LP34931 641 aa32.96■■■□□ 2.87
REPIN1-213ENST00000488943 CPS1P31327 1500 aa32.96■■■□□ 2.87
REPIN1-213ENST00000488943 MED1Q15648 1581 aaPredicted RBP32.93■■■□□ 2.86
REPIN1-213ENST00000488943 TNRQ92752 1358 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms