RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 NUP160Q12769 1436 aa20.12■□□□□ 0.81
ABCB1-207ENST00000488737 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
ABCB1-207ENST00000488737 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
ABCB1-207ENST00000488737 ADGBQ8N7X0 1667 aa20.09■□□□□ 0.81
ABCB1-207ENST00000488737 MPHOSPH9Q99550 1183 aa20.08■□□□□ 0.81
ABCB1-207ENST00000488737 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
ABCB1-207ENST00000488737 ANP32CO43423 234 aa20.07■□□□□ 0.8
ABCB1-207ENST00000488737 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
ABCB1-207ENST00000488737 CROCC2H7BZ55 1655 aa20.05■□□□□ 0.8
ABCB1-207ENST00000488737 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
ABCB1-207ENST00000488737 CAMSAP2Q08AD1 1489 aa20.04■□□□□ 0.8
ABCB1-207ENST00000488737 PLB1Q6P1J6 1458 aa20.04■□□□□ 0.8
ABCB1-207ENST00000488737 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
ABCB1-207ENST00000488737 SUPT16HQ9Y5B9 1047 aaKnown RBP20.03■□□□□ 0.8
ABCB1-207ENST00000488737 ADGRL2O95490 1459 aa20.02■□□□□ 0.8
ABCB1-207ENST00000488737 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
ABCB1-207ENST00000488737 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.8
ABCB1-207ENST00000488737 ANKRD30BQ9BXX2 1392 aa20.01■□□□□ 0.79
ABCB1-207ENST00000488737 KIF14Q15058 1648 aa20.01■□□□□ 0.79
ABCB1-207ENST00000488737 ABCA8O94911 1581 aa20■□□□□ 0.79
ABCB1-207ENST00000488737 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
ABCB1-207ENST00000488737 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
ABCB1-207ENST00000488737 TEX14Q8IWB6 1497 aa19.96■□□□□ 0.79
ABCB1-207ENST00000488737 CFDP1Q9UEE9 299 aaPredicted RBP19.96■□□□□ 0.79
ABCB1-207ENST00000488737 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
ABCB1-207ENST00000488737 CDC42BPAQ5VT25 1732 aa19.95■□□□□ 0.78
ABCB1-207ENST00000488737 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
ABCB1-207ENST00000488737 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
ABCB1-207ENST00000488737 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
ABCB1-207ENST00000488737 PZPP20742 1482 aa19.93■□□□□ 0.78
ABCB1-207ENST00000488737 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
ABCB1-207ENST00000488737 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
ABCB1-207ENST00000488737 POLR1AO95602 1720 aaPredicted RBP19.91■□□□□ 0.78
ABCB1-207ENST00000488737 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
ABCB1-207ENST00000488737 WASHC2AQ641Q2 1341 aa19.9■□□□□ 0.78
ABCB1-207ENST00000488737 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
ABCB1-207ENST00000488737 ANKRD30AQ9BXX3 1397 aa19.89■□□□□ 0.78
ABCB1-207ENST00000488737 ATP10BO94823 1461 aa19.89■□□□□ 0.77
ABCB1-207ENST00000488737 FOXD1Q16676 465 aa19.88■□□□□ 0.77
ABCB1-207ENST00000488737 CNTLNQ9NXG0 1405 aa19.86■□□□□ 0.77
ABCB1-207ENST00000488737 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
ABCB1-207ENST00000488737 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
ABCB1-207ENST00000488737 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
ABCB1-207ENST00000488737 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.77
ABCB1-207ENST00000488737 MBD5Q9P267 1494 aa19.83■□□□□ 0.77
ABCB1-207ENST00000488737 ANKRD50Q9ULJ7 1429 aa19.82■□□□□ 0.76
ABCB1-207ENST00000488737 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
ABCB1-207ENST00000488737 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
ABCB1-207ENST00000488737 CCDC7Q96M83 1385 aa19.82■□□□□ 0.76
ABCB1-207ENST00000488737 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
ABCB1-207ENST00000488737 C9orf84Q5VXU9 1444 aa19.8■□□□□ 0.76
ABCB1-207ENST00000488737 NBPF8Q3BBV2 869 aa19.8■□□□□ 0.76
ABCB1-207ENST00000488737 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
ABCB1-207ENST00000488737 ERCC6L2Q5T890 1561 aa19.77■□□□□ 0.76
ABCB1-207ENST00000488737 PTPRGP23470 1445 aa19.77■□□□□ 0.76
ABCB1-207ENST00000488737 PREX2Q70Z35 1606 aa19.77■□□□□ 0.76
ABCB1-207ENST00000488737 CDC42BPBQ9Y5S2 1711 aa19.74■□□□□ 0.75
ABCB1-207ENST00000488737 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
ABCB1-207ENST00000488737 NEFLP07196 543 aa19.73■□□□□ 0.75
ABCB1-207ENST00000488737 PKD2Q13563 968 aa19.73■□□□□ 0.75
ABCB1-207ENST00000488737 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
ABCB1-207ENST00000488737 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 SAMD9LQ8IVG5 1584 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 CCDC141Q6ZP82 1450 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 FKBP8Q14318 412 aa19.71■□□□□ 0.75
ABCB1-207ENST00000488737 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
ABCB1-207ENST00000488737 NUP155O75694 1391 aa19.69■□□□□ 0.74
ABCB1-207ENST00000488737 KDM5CP41229 1560 aa19.68■□□□□ 0.74
ABCB1-207ENST00000488737 MAST1Q9Y2H9 1570 aa19.68■□□□□ 0.74
ABCB1-207ENST00000488737 KIF15Q9NS87 1388 aa19.68■□□□□ 0.74
ABCB1-207ENST00000488737 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
ABCB1-207ENST00000488737 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
ABCB1-207ENST00000488737 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
ABCB1-207ENST00000488737 ARID4BQ4LE39 1312 aaPredicted RBP19.66■□□□□ 0.74
ABCB1-207ENST00000488737 HNRNPUQ00839 825 aaKnown RBP eCLIP19.65■□□□□ 0.74
ABCB1-207ENST00000488737 USP47Q96K76 1375 aa19.64■□□□□ 0.73
ABCB1-207ENST00000488737 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
ABCB1-207ENST00000488737 ABCC2Q92887 1545 aa19.62■□□□□ 0.73
ABCB1-207ENST00000488737 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
ABCB1-207ENST00000488737 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
ABCB1-207ENST00000488737 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
ABCB1-207ENST00000488737 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
ABCB1-207ENST00000488737 UNC13BO14795 1591 aa19.61■□□□□ 0.73
ABCB1-207ENST00000488737 PLEKHH2Q8IVE3 1493 aa19.6■□□□□ 0.73
ABCB1-207ENST00000488737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.6■□□□□ 0.73
ABCB1-207ENST00000488737 FAM135AQ9P2D6 1515 aa19.6■□□□□ 0.73
ABCB1-207ENST00000488737 PLXNC1O60486 1568 aa19.6■□□□□ 0.73
ABCB1-207ENST00000488737 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
ABCB1-207ENST00000488737 MYT1Q01538 1121 aa19.58■□□□□ 0.72
ABCB1-207ENST00000488737 BCANQ96GW7 911 aa19.58■□□□□ 0.72
ABCB1-207ENST00000488737 ARHGAP5Q13017 1502 aa19.57■□□□□ 0.72
ABCB1-207ENST00000488737 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
ABCB1-207ENST00000488737 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
ABCB1-207ENST00000488737 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
ABCB1-207ENST00000488737 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
ABCB1-207ENST00000488737 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
ABCB1-207ENST00000488737 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
ABCB1-207ENST00000488737 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms