RNA–Protein interactions for RNA: ENST00000488484.1

RANBP1-214, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-214ENST00000488484 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.54
RANBP1-214ENST00000488484 CDK13Q14004 1512 aaKnown RBP24.61■■□□□ 1.53
RANBP1-214ENST00000488484 MLECQ14165 292 aa24.6■■□□□ 1.53
RANBP1-214ENST00000488484 SCAPERQ9BY12 1400 aa24.57■■□□□ 1.52
RANBP1-214ENST00000488484 CERKQ8TCT0 537 aa24.56■■□□□ 1.52
RANBP1-214ENST00000488484 PLCH2O75038 1416 aa24.54■■□□□ 1.52
RANBP1-214ENST00000488484 PREX1Q8TCU6 1659 aa24.54■■□□□ 1.52
RANBP1-214ENST00000488484 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
RANBP1-214ENST00000488484 ARHGEF12Q9NZN5 1544 aa24.54■■□□□ 1.52
RANBP1-214ENST00000488484 FMN1Q68DA7 1419 aa24.52■■□□□ 1.52
RANBP1-214ENST00000488484 MYO5CQ9NQX4 1742 aa24.52■■□□□ 1.52
RANBP1-214ENST00000488484 C9orf84Q5VXU9 1444 aa24.52■■□□□ 1.52
RANBP1-214ENST00000488484 ATP10AO60312 1499 aa24.51■■□□□ 1.51
RANBP1-214ENST00000488484 CLIP1P30622 1438 aa24.49■■□□□ 1.51
RANBP1-214ENST00000488484 LOC105371045A0A1W2PR82 267 aa24.44■■□□□ 1.5
RANBP1-214ENST00000488484 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
RANBP1-214ENST00000488484 KIF14Q15058 1648 aa24.43■■□□□ 1.5
RANBP1-214ENST00000488484 ZNF518AQ6AHZ1 1483 aa24.42■■□□□ 1.5
RANBP1-214ENST00000488484 CEBPAP49715 358 aaPredicted RBP24.41■■□□□ 1.5
RANBP1-214ENST00000488484 STRCQ7RTU9 1775 aa24.41■■□□□ 1.5
RANBP1-214ENST00000488484 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
RANBP1-214ENST00000488484 KDM5CP41229 1560 aa24.4■■□□□ 1.5
RANBP1-214ENST00000488484 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
RANBP1-214ENST00000488484 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.49
RANBP1-214ENST00000488484 UHRF1BP1Q6BDS2 1440 aa24.38■■□□□ 1.49
RANBP1-214ENST00000488484 CDK11AQ9UQ88 783 aaPredicted RBP24.36■■□□□ 1.49
RANBP1-214ENST00000488484 DIP2CQ9Y2E4 1556 aa24.36■■□□□ 1.49
RANBP1-214ENST00000488484 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
RANBP1-214ENST00000488484 TROQ12816 1431 aaPredicted RBP24.34■■□□□ 1.49
RANBP1-214ENST00000488484 REREQ9P2R6 1566 aa24.33■■□□□ 1.48
RANBP1-214ENST00000488484 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
RANBP1-214ENST00000488484 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
RANBP1-214ENST00000488484 MYT1LQ9UL68 1186 aa24.32■■□□□ 1.48
RANBP1-214ENST00000488484 SETD1BQ9UPS6 1966 aaKnown RBP24.32■■□□□ 1.48
RANBP1-214ENST00000488484 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
RANBP1-214ENST00000488484 C3P01024 1663 aa24.3■■□□□ 1.48
RANBP1-214ENST00000488484 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
RANBP1-214ENST00000488484 LRRIQ1Q96JM4 1722 aa24.29■■□□□ 1.48
RANBP1-214ENST00000488484 CDC42BPBQ9Y5S2 1711 aa24.28■■□□□ 1.48
RANBP1-214ENST00000488484 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
RANBP1-214ENST00000488484 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
RANBP1-214ENST00000488484 ILDR2Q71H61 639 aa24.25■■□□□ 1.47
RANBP1-214ENST00000488484 PTPRTO14522 1441 aa24.25■■□□□ 1.47
RANBP1-214ENST00000488484 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
RANBP1-214ENST00000488484 ABCC1P33527 1531 aa24.24■■□□□ 1.47
RANBP1-214ENST00000488484 AGLP35573 1532 aa24.24■■□□□ 1.47
RANBP1-214ENST00000488484 CCDC18Q5T9S5 1454 aa24.23■■□□□ 1.47
RANBP1-214ENST00000488484 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
RANBP1-214ENST00000488484 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
RANBP1-214ENST00000488484 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
RANBP1-214ENST00000488484 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
RANBP1-214ENST00000488484 SOCS7O14512 581 aa24.18■■□□□ 1.46
RANBP1-214ENST00000488484 LTBP4Q8N2S1 1624 aa24.17■■□□□ 1.46
RANBP1-214ENST00000488484 KIDINS220Q9ULH0 1771 aa24.17■■□□□ 1.46
RANBP1-214ENST00000488484 CNTLNQ9NXG0 1405 aa24.16■■□□□ 1.46
RANBP1-214ENST00000488484 NCOA1Q15788 1441 aa24.15■■□□□ 1.46
RANBP1-214ENST00000488484 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
RANBP1-214ENST00000488484 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
RANBP1-214ENST00000488484 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
RANBP1-214ENST00000488484 MROH2AA6NES4 1674 aa24.11■■□□□ 1.45
RANBP1-214ENST00000488484 CAMSAP1Q5T5Y3 1602 aa24.09■■□□□ 1.45
RANBP1-214ENST00000488484 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
RANBP1-214ENST00000488484 NPATQ14207 1427 aa24.08■■□□□ 1.44
RANBP1-214ENST00000488484 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
RANBP1-214ENST00000488484 SUPT6HQ7KZ85 1726 aaKnown RBP24.04■■□□□ 1.44
RANBP1-214ENST00000488484 MYO3AQ8NEV4 1616 aa24.01■■□□□ 1.43
RANBP1-214ENST00000488484 ZNF142P52746 1687 aaPredicted RBP24.01■■□□□ 1.43
RANBP1-214ENST00000488484 ZMYM3Q14202 1370 aa24.01■■□□□ 1.43
RANBP1-214ENST00000488484 CLTCQ00610 1675 aaKnown RBP24■■□□□ 1.43
RANBP1-214ENST00000488484 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
RANBP1-214ENST00000488484 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
RANBP1-214ENST00000488484 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
RANBP1-214ENST00000488484 SPAG9O60271 1321 aaKnown RBP23.98■■□□□ 1.43
RANBP1-214ENST00000488484 PLXNC1O60486 1568 aa23.97■■□□□ 1.43
RANBP1-214ENST00000488484 APLP2Q06481 763 aa23.97■■□□□ 1.43
RANBP1-214ENST00000488484 NCKAP5LQ9HCH0 1330 aa23.97■■□□□ 1.43
RANBP1-214ENST00000488484 INO80Q9ULG1 1556 aaPredicted RBP23.96■■□□□ 1.43
RANBP1-214ENST00000488484 ZNF335Q9H4Z2 1342 aaPredicted RBP23.96■■□□□ 1.43
RANBP1-214ENST00000488484 GPATCH8Q9UKJ3 1502 aaKnown RBP23.95■■□□□ 1.43
RANBP1-214ENST00000488484 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
RANBP1-214ENST00000488484 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
RANBP1-214ENST00000488484 HNRNPMP52272 730 aaKnown RBP eCLIP23.93■■□□□ 1.429e-7■■■□□ 17.6
RANBP1-214ENST00000488484 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
RANBP1-214ENST00000488484 A2MP01023 1474 aa23.93■■□□□ 1.42
RANBP1-214ENST00000488484 UBAP1LF5GYI3 381 aa23.91■■□□□ 1.42
RANBP1-214ENST00000488484 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
RANBP1-214ENST00000488484 PLEKHH2Q8IVE3 1493 aa23.91■■□□□ 1.42
RANBP1-214ENST00000488484 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
RANBP1-214ENST00000488484 KIAA1107Q9UPP5 1409 aa23.9■■□□□ 1.42
RANBP1-214ENST00000488484 TIAM1Q13009 1591 aa23.9■■□□□ 1.42
RANBP1-214ENST00000488484 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.42
RANBP1-214ENST00000488484 PKD2Q13563 968 aa23.89■■□□□ 1.41
RANBP1-214ENST00000488484 ADGBQ8N7X0 1667 aa23.86■■□□□ 1.41
RANBP1-214ENST00000488484 CFDP1Q9UEE9 299 aaPredicted RBP23.86■■□□□ 1.41
RANBP1-214ENST00000488484 GGT6Q6P531 493 aa23.85■■□□□ 1.41
RANBP1-214ENST00000488484 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
RANBP1-214ENST00000488484 LRRC9Q6ZRR7 1453 aa23.82■■□□□ 1.4
RANBP1-214ENST00000488484 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
RANBP1-214ENST00000488484 A2ML1A8K2U0 1454 aa23.81■■□□□ 1.4
RANBP1-214ENST00000488484 DNMT1P26358 1616 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms