RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ADGRL1O94910 1474 aa37.75■■■■□ 3.63
RHBDD3-205ENST00000488106 EHBP1L1Q8N3D4 1523 aa37.73■■■■□ 3.63
RHBDD3-205ENST00000488106 MTUS2Q5JR59 1369 aa37.71■■■■□ 3.63
RHBDD3-205ENST00000488106 TIAM1Q13009 1591 aa37.7■■■■□ 3.63
RHBDD3-205ENST00000488106 EFCAB2Q5VUJ9 269 aa37.67■■■■□ 3.62
RHBDD3-205ENST00000488106 ZMYM4Q5VZL5 1548 aa37.64■■■■□ 3.62
RHBDD3-205ENST00000488106 SCAPERQ9BY12 1400 aa37.63■■■■□ 3.61
RHBDD3-205ENST00000488106 ARHGEF40Q8TER5 1519 aa37.63■■■■□ 3.61
RHBDD3-205ENST00000488106 ITSN2Q9NZM3 1697 aa37.63■■■■□ 3.61
RHBDD3-205ENST00000488106 POGZQ7Z3K3 1410 aa37.61■■■■□ 3.61
RHBDD3-205ENST00000488106 SUPT6HQ7KZ85 1726 aaKnown RBP37.61■■■■□ 3.61
RHBDD3-205ENST00000488106 ABCC1P33527 1531 aa37.58■■■■□ 3.61
RHBDD3-205ENST00000488106 GPATCH8Q9UKJ3 1502 aaKnown RBP37.56■■■■□ 3.6
RHBDD3-205ENST00000488106 SAMD9LQ8IVG5 1584 aa37.55■■■■□ 3.6
RHBDD3-205ENST00000488106 KDM4FA0A1W2PPD8 638 aa37.54■■■■□ 3.6
RHBDD3-205ENST00000488106 ZFYVE16Q7Z3T8 1539 aa37.54■■■■□ 3.6
RHBDD3-205ENST00000488106 CCNB3Q8WWL7 1395 aa37.51■■■■□ 3.59
RHBDD3-205ENST00000488106 ZNF518AQ6AHZ1 1483 aa37.49■■■■□ 3.59
RHBDD3-205ENST00000488106 KDM5CP41229 1560 aa37.49■■■■□ 3.59
RHBDD3-205ENST00000488106 HECW2Q9P2P5 1572 aa37.46■■■■□ 3.59
RHBDD3-205ENST00000488106 MAP3K1Q13233 1512 aa37.46■■■■□ 3.59
RHBDD3-205ENST00000488106 ARHGEF12Q9NZN5 1544 aa37.46■■■■□ 3.59
RHBDD3-205ENST00000488106 LRRC9Q6ZRR7 1453 aa37.45■■■■□ 3.59
RHBDD3-205ENST00000488106 YEATS2Q9ULM3 1422 aa37.45■■■■□ 3.59
RHBDD3-205ENST00000488106 NCOA2Q15596 1464 aa37.45■■■■□ 3.59
RHBDD3-205ENST00000488106 MAGI2Q86UL8 1455 aa37.45■■■■□ 3.59
RHBDD3-205ENST00000488106 SIGLEC1Q9BZZ2 1709 aa37.44■■■■□ 3.58
RHBDD3-205ENST00000488106 SYCP2Q9BX26 1530 aa37.44■■■■□ 3.58
RHBDD3-205ENST00000488106 ZNF777Q9ULD5 760 aaPredicted RBP37.43■■■■□ 3.58
RHBDD3-205ENST00000488106 BCORL1Q5H9F3 1711 aa37.4■■■■□ 3.58
RHBDD3-205ENST00000488106 CFDP1Q9UEE9 299 aaPredicted RBP37.38■■■■□ 3.57
RHBDD3-205ENST00000488106 TRAPPC8Q9Y2L5 1435 aa37.37■■■■□ 3.57
RHBDD3-205ENST00000488106 AFAP1Q8N556 730 aa37.35■■■■□ 3.57
RHBDD3-205ENST00000488106 ABCA6Q8N139 1617 aa37.34■■■■□ 3.57
RHBDD3-205ENST00000488106 ADAMTSL3P82987 1691 aa37.33■■■■□ 3.57
RHBDD3-205ENST00000488106 KIDINS220Q9ULH0 1771 aa37.32■■■■□ 3.57
RHBDD3-205ENST00000488106 PLEKHH2Q8IVE3 1493 aa37.32■■■■□ 3.56
RHBDD3-205ENST00000488106 DIP2CQ9Y2E4 1556 aa37.31■■■■□ 3.56
RHBDD3-205ENST00000488106 ARID4BQ4LE39 1312 aaPredicted RBP37.3■■■■□ 3.56
RHBDD3-205ENST00000488106 KANK4Q5T7N3 995 aaPredicted RBP37.29■■■■□ 3.56
RHBDD3-205ENST00000488106 MYT1LQ9UL68 1186 aa37.28■■■■□ 3.56
RHBDD3-205ENST00000488106 MADDQ8WXG6 1647 aa37.26■■■■□ 3.56
RHBDD3-205ENST00000488106 APLP2Q06481 763 aa37.26■■■■□ 3.56
RHBDD3-205ENST00000488106 ATP10AO60312 1499 aa37.26■■■■□ 3.55
RHBDD3-205ENST00000488106 MLH3Q9UHC1 1453 aa37.26■■■■□ 3.55
RHBDD3-205ENST00000488106 C9orf84Q5VXU9 1444 aa37.25■■■■□ 3.55
RHBDD3-205ENST00000488106 KIAA1107Q9UPP5 1409 aa37.24■■■■□ 3.55
RHBDD3-205ENST00000488106 HNRNPMP52272 730 aaKnown RBP eCLIP37.23■■■■□ 3.55
RHBDD3-205ENST00000488106 CAMSAP2Q08AD1 1489 aa37.21■■■■□ 3.55
RHBDD3-205ENST00000488106 ZNF644Q9H582 1327 aaPredicted RBP37.21■■■■□ 3.55
RHBDD3-205ENST00000488106 RIMS1Q86UR5 1692 aaKnown RBP37.21■■■■□ 3.55
RHBDD3-205ENST00000488106 INO80Q9ULG1 1556 aaPredicted RBP37.21■■■■□ 3.55
RHBDD3-205ENST00000488106 FER1L4A9Z1Z3 1794 aa37.2■■■■□ 3.55
RHBDD3-205ENST00000488106 ATP7AQ04656 1500 aa37.17■■■■□ 3.54
RHBDD3-205ENST00000488106 REREQ9P2R6 1566 aa37.16■■■■□ 3.54
RHBDD3-205ENST00000488106 MBD5Q9P267 1494 aa37.11■■■■□ 3.53
RHBDD3-205ENST00000488106 SPAG9O60271 1321 aaKnown RBP37.1■■■■□ 3.53
RHBDD3-205ENST00000488106 MYOM3Q5VTT5 1437 aa37.1■■■■□ 3.53
RHBDD3-205ENST00000488106 ADGBQ8N7X0 1667 aa37.08■■■■□ 3.53
RHBDD3-205ENST00000488106 MLECQ14165 292 aa37.06■■■■□ 3.52
RHBDD3-205ENST00000488106 ARHGEF5Q12774 1597 aa37.05■■■■□ 3.52
RHBDD3-205ENST00000488106 PTPRMP28827 1452 aa37.05■■■■□ 3.52
RHBDD3-205ENST00000488106 CCDC141Q6ZP82 1450 aa37.05■■■■□ 3.52
RHBDD3-205ENST00000488106 MIA2Q96PC5 1412 aa37■■■■□ 3.51
RHBDD3-205ENST00000488106 PTPN23Q9H3S7 1636 aa36.99■■■■□ 3.51
RHBDD3-205ENST00000488106 AGLP35573 1532 aa36.99■■■■□ 3.51
RHBDD3-205ENST00000488106 PLXNC1O60486 1568 aa36.96■■■■□ 3.51
RHBDD3-205ENST00000488106 CROCC2H7BZ55 1655 aa36.93■■■■□ 3.5
RHBDD3-205ENST00000488106 A2MP01023 1474 aa36.91■■■■□ 3.5
RHBDD3-205ENST00000488106 RTEL1-TNFRSF6BF6WH68 1400 aa36.9■■■■□ 3.5
RHBDD3-205ENST00000488106 FGD6Q6ZV73 1430 aa36.87■■■■□ 3.49
RHBDD3-205ENST00000488106 MAST1Q9Y2H9 1570 aa36.87■■■■□ 3.49
RHBDD3-205ENST00000488106 RSPH4AQ5TD94 716 aa36.84■■■■□ 3.49
RHBDD3-205ENST00000488106 PLPPR3Q6T4P5 718 aa36.83■■■■□ 3.49
RHBDD3-205ENST00000488106 DNMT1P26358 1616 aaKnown RBP36.81■■■■□ 3.48
RHBDD3-205ENST00000488106 C3P01024 1663 aa36.8■■■■□ 3.48
RHBDD3-205ENST00000488106 TCOF1Q13428 1488 aaKnown RBP36.79■■■■□ 3.48
RHBDD3-205ENST00000488106 CLTCQ00610 1675 aaKnown RBP36.77■■■■□ 3.48
RHBDD3-205ENST00000488106 TSPY4P0CV99 314 aa36.76■■■■□ 3.48
RHBDD3-205ENST00000488106 TSPY10P0CW01 314 aa36.76■■■■□ 3.48
RHBDD3-205ENST00000488106 MROH2AA6NES4 1674 aa36.74■■■■□ 3.47
RHBDD3-205ENST00000488106 SHANK2Q9UPX8 1470 aa36.69■■■■□ 3.46
RHBDD3-205ENST00000488106 DHX29Q7Z478 1369 aaKnown RBP36.69■■■■□ 3.46
RHBDD3-205ENST00000488106 ABCC5O15440 1437 aa36.68■■■■□ 3.46
RHBDD3-205ENST00000488106 DAPK1P53355 1430 aa36.68■■■■□ 3.46
RHBDD3-205ENST00000488106 ESF1Q9H501 851 aaKnown RBP36.68■■■■□ 3.46
RHBDD3-205ENST00000488106 PREX1Q8TCU6 1659 aa36.67■■■■□ 3.46
RHBDD3-205ENST00000488106 PPARGC1BQ86YN6 1023 aaKnown RBP36.67■■■■□ 3.46
RHBDD3-205ENST00000488106 CNTLNQ9NXG0 1405 aa36.64■■■■□ 3.46
RHBDD3-205ENST00000488106 SETD1BQ9UPS6 1966 aaKnown RBP36.63■■■■□ 3.45
RHBDD3-205ENST00000488106 EIF2AK4Q9P2K8 1649 aaKnown RBP36.63■■■■□ 3.45
RHBDD3-205ENST00000488106 CEBPAP49715 358 aaPredicted RBP36.62■■■■□ 3.45
RHBDD3-205ENST00000488106 GGT6Q6P531 493 aa36.61■■■■□ 3.45
RHBDD3-205ENST00000488106 LMTK3Q96Q04 1460 aa36.61■■■■□ 3.45
RHBDD3-205ENST00000488106 FAM50AQ14320 339 aaKnown RBP36.58■■■■□ 3.45
RHBDD3-205ENST00000488106 RNF17Q9BXT8 1623 aaKnown RBP36.58■■■■□ 3.45
RHBDD3-205ENST00000488106 DUOX2Q9NRD8 1548 aa36.57■■■■□ 3.44
RHBDD3-205ENST00000488106 KIF3BO15066 747 aa36.56■■■■□ 3.44
RHBDD3-205ENST00000488106 KIF15Q9NS87 1388 aa36.51■■■■□ 3.43
RHBDD3-205ENST00000488106 KDM5DQ9BY66 1539 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms