RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 PLPPR3Q6T4P5 718 aa25.29■■□□□ 1.64
PFDN4-204ENST00000487129 PLCH2O75038 1416 aa25.28■■□□□ 1.64
PFDN4-204ENST00000487129 EEA1Q15075 1411 aa25.28■■□□□ 1.64
PFDN4-204ENST00000487129 SCAPERQ9BY12 1400 aa25.27■■□□□ 1.64
PFDN4-204ENST00000487129 MLECQ14165 292 aa25.25■■□□□ 1.63
PFDN4-204ENST00000487129 ATP10AO60312 1499 aa25.22■■□□□ 1.63
PFDN4-204ENST00000487129 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.63
PFDN4-204ENST00000487129 PREX1Q8TCU6 1659 aa25.18■■□□□ 1.62
PFDN4-204ENST00000487129 CEBPAP49715 358 aaPredicted RBP25.15■■□□□ 1.62
PFDN4-204ENST00000487129 STRCQ7RTU9 1775 aa25.15■■□□□ 1.62
PFDN4-204ENST00000487129 KDM5CP41229 1560 aa25.13■■□□□ 1.61
PFDN4-204ENST00000487129 MYO5CQ9NQX4 1742 aa25.12■■□□□ 1.61
PFDN4-204ENST00000487129 KIF14Q15058 1648 aa25.12■■□□□ 1.61
PFDN4-204ENST00000487129 EFCAB2Q5VUJ9 269 aa25.1■■□□□ 1.61
PFDN4-204ENST00000487129 ZNF518AQ6AHZ1 1483 aa25.09■■□□□ 1.61
PFDN4-204ENST00000487129 DIP2CQ9Y2E4 1556 aa25.06■■□□□ 1.6
PFDN4-204ENST00000487129 ILDR2Q71H61 639 aa25.06■■□□□ 1.6
PFDN4-204ENST00000487129 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
PFDN4-204ENST00000487129 ARHGAP35Q9NRY4 1499 aa25.05■■□□□ 1.6
PFDN4-204ENST00000487129 AFAP1Q8N556 730 aa25.05■■□□□ 1.6
PFDN4-204ENST00000487129 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
PFDN4-204ENST00000487129 UHRF1BP1Q6BDS2 1440 aa25.04■■□□□ 1.6
PFDN4-204ENST00000487129 TROQ12816 1431 aaPredicted RBP25.03■■□□□ 1.6
PFDN4-204ENST00000487129 ARHGAP5Q13017 1502 aa25.01■■□□□ 1.59
PFDN4-204ENST00000487129 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
PFDN4-204ENST00000487129 DMRT2Q9Y5R5 561 aa25■■□□□ 1.59
PFDN4-204ENST00000487129 DISP3Q9P2K9 1392 aa24.99■■□□□ 1.59
PFDN4-204ENST00000487129 C3P01024 1663 aa24.98■■□□□ 1.59
PFDN4-204ENST00000487129 MLH3Q9UHC1 1453 aa24.98■■□□□ 1.59
PFDN4-204ENST00000487129 PTPRTO14522 1441 aa24.98■■□□□ 1.59
PFDN4-204ENST00000487129 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
PFDN4-204ENST00000487129 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
PFDN4-204ENST00000487129 AGLP35573 1532 aa24.96■■□□□ 1.59
PFDN4-204ENST00000487129 CDK11AQ9UQ88 783 aaPredicted RBP24.96■■□□□ 1.59
PFDN4-204ENST00000487129 CDC42BPBQ9Y5S2 1711 aa24.95■■□□□ 1.59
PFDN4-204ENST00000487129 LTBP4Q8N2S1 1624 aa24.95■■□□□ 1.58
PFDN4-204ENST00000487129 ATP1B4Q9UN42 357 aaPredicted RBP24.95■■□□□ 1.58
PFDN4-204ENST00000487129 TRAPPC8Q9Y2L5 1435 aa24.94■■□□□ 1.58
PFDN4-204ENST00000487129 ABCC1P33527 1531 aa24.93■■□□□ 1.58
PFDN4-204ENST00000487129 SOCS7O14512 581 aa24.92■■□□□ 1.58
PFDN4-204ENST00000487129 CLIP1P30622 1438 aa24.91■■□□□ 1.58
PFDN4-204ENST00000487129 PREX2Q70Z35 1606 aa24.9■■□□□ 1.58
PFDN4-204ENST00000487129 NCOA1Q15788 1441 aa24.88■■□□□ 1.57
PFDN4-204ENST00000487129 SPATA31D1Q6ZQQ2 1576 aa24.87■■□□□ 1.57
PFDN4-204ENST00000487129 KIDINS220Q9ULH0 1771 aa24.86■■□□□ 1.57
PFDN4-204ENST00000487129 ITSN2Q9NZM3 1697 aa24.86■■□□□ 1.57
PFDN4-204ENST00000487129 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
PFDN4-204ENST00000487129 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
PFDN4-204ENST00000487129 IQSEC2Q5JU85 1478 aa24.84■■□□□ 1.57
PFDN4-204ENST00000487129 MYT1LQ9UL68 1186 aa24.83■■□□□ 1.57
PFDN4-204ENST00000487129 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
PFDN4-204ENST00000487129 NPATQ14207 1427 aa24.78■■□□□ 1.56
PFDN4-204ENST00000487129 SAMD9LQ8IVG5 1584 aa24.77■■□□□ 1.56
PFDN4-204ENST00000487129 CDC42BPAQ5VT25 1732 aa24.77■■□□□ 1.56
PFDN4-204ENST00000487129 CASKIN1Q8WXD9 1431 aa24.77■■□□□ 1.56
PFDN4-204ENST00000487129 CAMSAP1Q5T5Y3 1602 aa24.76■■□□□ 1.55
PFDN4-204ENST00000487129 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
PFDN4-204ENST00000487129 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
PFDN4-204ENST00000487129 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
PFDN4-204ENST00000487129 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
PFDN4-204ENST00000487129 SYCP2Q9BX26 1530 aa24.7■■□□□ 1.54
PFDN4-204ENST00000487129 PLXNC1O60486 1568 aa24.69■■□□□ 1.54
PFDN4-204ENST00000487129 ZNF335Q9H4Z2 1342 aaPredicted RBP24.68■■□□□ 1.54
PFDN4-204ENST00000487129 ZNF142P52746 1687 aaPredicted RBP24.67■■□□□ 1.54
PFDN4-204ENST00000487129 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
PFDN4-204ENST00000487129 NCKAP5LQ9HCH0 1330 aa24.66■■□□□ 1.54
PFDN4-204ENST00000487129 PLA2R1Q13018 1463 aa24.65■■□□□ 1.54
PFDN4-204ENST00000487129 TCOF1Q13428 1488 aaKnown RBP24.65■■□□□ 1.54
PFDN4-204ENST00000487129 MYO3AQ8NEV4 1616 aa24.65■■□□□ 1.54
PFDN4-204ENST00000487129 INO80Q9ULG1 1556 aaPredicted RBP24.64■■□□□ 1.54
PFDN4-204ENST00000487129 PTPRKQ15262 1439 aa24.64■■□□□ 1.54
PFDN4-204ENST00000487129 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.53
PFDN4-204ENST00000487129 ATP7AQ04656 1500 aa24.63■■□□□ 1.53
PFDN4-204ENST00000487129 FYCO1Q9BQS8 1478 aa24.63■■□□□ 1.53
PFDN4-204ENST00000487129 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
PFDN4-204ENST00000487129 SPAG9O60271 1321 aaKnown RBP24.62■■□□□ 1.53
PFDN4-204ENST00000487129 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
PFDN4-204ENST00000487129 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
PFDN4-204ENST00000487129 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
PFDN4-204ENST00000487129 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
PFDN4-204ENST00000487129 A2MP01023 1474 aa24.59■■□□□ 1.53
PFDN4-204ENST00000487129 PKD2Q13563 968 aa24.57■■□□□ 1.52
PFDN4-204ENST00000487129 UBAP1LF5GYI3 381 aa24.56■■□□□ 1.52
PFDN4-204ENST00000487129 PLEKHH2Q8IVE3 1493 aa24.53■■□□□ 1.52
PFDN4-204ENST00000487129 GGT6Q6P531 493 aa24.49■■□□□ 1.51
PFDN4-204ENST00000487129 CFDP1Q9UEE9 299 aaPredicted RBP24.49■■□□□ 1.51
PFDN4-204ENST00000487129 A2ML1A8K2U0 1454 aa24.49■■□□□ 1.51
PFDN4-204ENST00000487129 DNMT1P26358 1616 aaKnown RBP24.48■■□□□ 1.51
PFDN4-204ENST00000487129 PPP6R1Q9UPN7 881 aa24.47■■□□□ 1.51
PFDN4-204ENST00000487129 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
PFDN4-204ENST00000487129 MBD5Q9P267 1494 aa24.46■■□□□ 1.51
PFDN4-204ENST00000487129 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
PFDN4-204ENST00000487129 NEURL4Q96JN8 1562 aa24.46■■□□□ 1.51
PFDN4-204ENST00000487129 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
PFDN4-204ENST00000487129 ZNF644Q9H582 1327 aaPredicted RBP24.43■■□□□ 1.5
PFDN4-204ENST00000487129 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
PFDN4-204ENST00000487129 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
PFDN4-204ENST00000487129 RTEL1-TNFRSF6BF6WH68 1400 aa24.39■■□□□ 1.5
PFDN4-204ENST00000487129 HSPA1LP34931 641 aa24.39■■□□□ 1.49
PFDN4-204ENST00000487129 CPS1P31327 1500 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms