RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
R3HDM1-217ENST00000486532 FBXO22Q8NEZ5 403 aa10.55□□□□□ -0.72
R3HDM1-217ENST00000486532 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
R3HDM1-217ENST00000486532 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
R3HDM1-217ENST00000486532 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
R3HDM1-217ENST00000486532 ZSWIM6Q9HCJ5 1215 aa10.51□□□□□ -0.73
R3HDM1-217ENST00000486532 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
R3HDM1-217ENST00000486532 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
R3HDM1-217ENST00000486532 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
R3HDM1-217ENST00000486532 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
R3HDM1-217ENST00000486532 TMEM92Q6UXU6 159 aa10.44□□□□□ -0.74
R3HDM1-217ENST00000486532 ERBB3P21860 1342 aa10.41□□□□□ -0.74
R3HDM1-217ENST00000486532 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.74
R3HDM1-217ENST00000486532 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
R3HDM1-217ENST00000486532 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
R3HDM1-217ENST00000486532 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
R3HDM1-217ENST00000486532 KIF3CO14782 793 aa10.36□□□□□ -0.75
R3HDM1-217ENST00000486532 C2orf72A6NCS6 295 aa10.35□□□□□ -0.75
R3HDM1-217ENST00000486532 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
R3HDM1-217ENST00000486532 SLC34A2O95436 690 aa10.31□□□□□ -0.76
R3HDM1-217ENST00000486532 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
R3HDM1-217ENST00000486532 PPP1R37O75864 691 aa10.29□□□□□ -0.76
R3HDM1-217ENST00000486532 ARSIQ5FYB1 569 aa10.29□□□□□ -0.76
R3HDM1-217ENST00000486532 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
R3HDM1-217ENST00000486532 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
R3HDM1-217ENST00000486532 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
R3HDM1-217ENST00000486532 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
R3HDM1-217ENST00000486532 PTGER2P43116 358 aa10.25□□□□□ -0.77
R3HDM1-217ENST00000486532 FOXK1P85037 733 aa10.24□□□□□ -0.77
R3HDM1-217ENST00000486532 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
R3HDM1-217ENST00000486532 TBC1D12O60347 775 aa10.23□□□□□ -0.77
R3HDM1-217ENST00000486532 PSDA5PKW4 1024 aaPredicted RBP10.22□□□□□ -0.77
R3HDM1-217ENST00000486532 PCDHGA4Q9Y5G9 962 aa10.22□□□□□ -0.77
R3HDM1-217ENST00000486532 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
R3HDM1-217ENST00000486532 NUDT7P0C024 238 aa10.19□□□□□ -0.78
R3HDM1-217ENST00000486532 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
R3HDM1-217ENST00000486532 PBX2P40425 430 aa10.18□□□□□ -0.78
R3HDM1-217ENST00000486532 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
R3HDM1-217ENST00000486532 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
R3HDM1-217ENST00000486532 PDE4AP27815 886 aa10.16□□□□□ -0.78
R3HDM1-217ENST00000486532 DSG2Q14126 1118 aa10.14□□□□□ -0.79
R3HDM1-217ENST00000486532 LHX6Q9UPM6 363 aa10.14□□□□□ -0.79
R3HDM1-217ENST00000486532 GTPBP6O43824 516 aaPredicted RBP10.11□□□□□ -0.79
R3HDM1-217ENST00000486532 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
R3HDM1-217ENST00000486532 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
R3HDM1-217ENST00000486532 LSM11P83369 360 aaKnown RBP eCLIP10.08□□□□□ -0.8
R3HDM1-217ENST00000486532 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
R3HDM1-217ENST00000486532 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
R3HDM1-217ENST00000486532 ANKRD13DQ6ZTN6 518 aa10.08□□□□□ -0.8
R3HDM1-217ENST00000486532 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
R3HDM1-217ENST00000486532 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
R3HDM1-217ENST00000486532 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
R3HDM1-217ENST00000486532 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
R3HDM1-217ENST00000486532 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
R3HDM1-217ENST00000486532 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
R3HDM1-217ENST00000486532 LARP6Q9BRS8 491 aaKnown RBP10.02□□□□□ -0.81
R3HDM1-217ENST00000486532 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
R3HDM1-217ENST00000486532 NCKAP5LQ9HCH0 1330 aa10.01□□□□□ -0.81
R3HDM1-217ENST00000486532 TK2O00142 265 aa9.99□□□□□ -0.81
R3HDM1-217ENST00000486532 MFSD10Q14728 455 aa9.99□□□□□ -0.81
R3HDM1-217ENST00000486532 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.98□□□□□ -0.81
R3HDM1-217ENST00000486532 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
R3HDM1-217ENST00000486532 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
R3HDM1-217ENST00000486532 STAC3Q96MF2 364 aa9.96□□□□□ -0.82
R3HDM1-217ENST00000486532 PLA2G2EQ9NZK7 142 aa9.96□□□□□ -0.82
R3HDM1-217ENST00000486532 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
R3HDM1-217ENST00000486532 POTEEQ6S8J3 1075 aa9.95□□□□□ -0.82
R3HDM1-217ENST00000486532 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
R3HDM1-217ENST00000486532 HCSTQ9UBK5 93 aa9.94□□□□□ -0.82
R3HDM1-217ENST00000486532 EVI5O60447 810 aa9.93□□□□□ -0.82
R3HDM1-217ENST00000486532 ANO8Q9HCE9 1232 aaPredicted RBP9.93□□□□□ -0.82
R3HDM1-217ENST00000486532 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
R3HDM1-217ENST00000486532 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
R3HDM1-217ENST00000486532 BCL2L12Q9HB09 334 aa9.91□□□□□ -0.82
R3HDM1-217ENST00000486532 PTPREP23469 700 aa9.9□□□□□ -0.82
R3HDM1-217ENST00000486532 FOSBP53539 338 aa9.9□□□□□ -0.82
R3HDM1-217ENST00000486532 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
R3HDM1-217ENST00000486532 PSEN2P49810 448 aa9.89□□□□□ -0.83
R3HDM1-217ENST00000486532 ZDHHC16Q969W1 377 aa9.87□□□□□ -0.83
R3HDM1-217ENST00000486532 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
R3HDM1-217ENST00000486532 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
R3HDM1-217ENST00000486532 HRO43593 1189 aa9.85□□□□□ -0.83
R3HDM1-217ENST00000486532 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
R3HDM1-217ENST00000486532 FBXW7Q969H0 707 aa9.84□□□□□ -0.83
R3HDM1-217ENST00000486532 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
R3HDM1-217ENST00000486532 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
R3HDM1-217ENST00000486532 EMILIN3Q9NT22 766 aa9.83□□□□□ -0.84
R3HDM1-217ENST00000486532 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
R3HDM1-217ENST00000486532 PHF14O94880 888 aa9.81□□□□□ -0.84
R3HDM1-217ENST00000486532 TYW1BQ6NUM6 668 aa9.8□□□□□ -0.84
R3HDM1-217ENST00000486532 EPAS1Q99814 870 aa9.8□□□□□ -0.84
R3HDM1-217ENST00000486532 WDR70Q9NW82 654 aa9.79□□□□□ -0.84
R3HDM1-217ENST00000486532 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
R3HDM1-217ENST00000486532 PPP1R3GB7ZBB8 358 aa9.78□□□□□ -0.84
R3HDM1-217ENST00000486532 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
R3HDM1-217ENST00000486532 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
R3HDM1-217ENST00000486532 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
R3HDM1-217ENST00000486532 PAXIP1Q6ZW49 1069 aaPredicted RBP9.77□□□□□ -0.85
R3HDM1-217ENST00000486532 ZBED2Q9BTP6 218 aa9.77□□□□□ -0.85
R3HDM1-217ENST00000486532 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms