RNA–Protein interactions for RNA: ENST00000486500.1

CALM3-205, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 2,536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-205ENST00000486500 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
CALM3-205ENST00000486500 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
CALM3-205ENST00000486500 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
CALM3-205ENST00000486500 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
CALM3-205ENST00000486500 WDR62O43379 1518 aa17.46■□□□□ 0.39
CALM3-205ENST00000486500 ROCK1Q13464 1354 aa17.46■□□□□ 0.38
CALM3-205ENST00000486500 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.38
CALM3-205ENST00000486500 RPRD2Q5VT52 1461 aaKnown RBP17.44■□□□□ 0.38
CALM3-205ENST00000486500 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
CALM3-205ENST00000486500 DAPK1P53355 1430 aa17.43■□□□□ 0.38
CALM3-205ENST00000486500 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
CALM3-205ENST00000486500 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
CALM3-205ENST00000486500 PPP4R2Q9NY27 417 aa17.42■□□□□ 0.38
CALM3-205ENST00000486500 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
CALM3-205ENST00000486500 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
CALM3-205ENST00000486500 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
CALM3-205ENST00000486500 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
CALM3-205ENST00000486500 MSH5O43196 834 aa17.4■□□□□ 0.38
CALM3-205ENST00000486500 ABCC5O15440 1437 aa17.39■□□□□ 0.38
CALM3-205ENST00000486500 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
CALM3-205ENST00000486500 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.37
CALM3-205ENST00000486500 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
CALM3-205ENST00000486500 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
CALM3-205ENST00000486500 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
CALM3-205ENST00000486500 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
CALM3-205ENST00000486500 ZNF644Q9H582 1327 aaPredicted RBP17.35■□□□□ 0.37
CALM3-205ENST00000486500 POLR1AO95602 1720 aaPredicted RBP17.35■□□□□ 0.37
CALM3-205ENST00000486500 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
CALM3-205ENST00000486500 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
CALM3-205ENST00000486500 DISP1Q96F81 1524 aa17.3■□□□□ 0.36
CALM3-205ENST00000486500 KIAA0586Q9BVV6 1533 aa17.3■□□□□ 0.36
CALM3-205ENST00000486500 PZPP20742 1482 aa17.28■□□□□ 0.36
CALM3-205ENST00000486500 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
CALM3-205ENST00000486500 RAPGEF6Q8TEU7 1601 aa17.28■□□□□ 0.36
CALM3-205ENST00000486500 B4GALNT3Q6L9W6 998 aa17.27■□□□□ 0.36
CALM3-205ENST00000486500 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
CALM3-205ENST00000486500 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
CALM3-205ENST00000486500 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
CALM3-205ENST00000486500 CAMSAP2Q08AD1 1489 aa17.24■□□□□ 0.35
CALM3-205ENST00000486500 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
CALM3-205ENST00000486500 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
CALM3-205ENST00000486500 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
CALM3-205ENST00000486500 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
CALM3-205ENST00000486500 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
CALM3-205ENST00000486500 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
CALM3-205ENST00000486500 PRG4Q92954 1404 aaPredicted RBP17.22■□□□□ 0.35
CALM3-205ENST00000486500 USP47Q96K76 1375 aa17.22■□□□□ 0.35
CALM3-205ENST00000486500 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
CALM3-205ENST00000486500 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
CALM3-205ENST00000486500 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
CALM3-205ENST00000486500 ITSN2Q9NZM3 1697 aa17.2■□□□□ 0.34
CALM3-205ENST00000486500 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
CALM3-205ENST00000486500 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
CALM3-205ENST00000486500 PKD2Q13563 968 aa17.19■□□□□ 0.34
CALM3-205ENST00000486500 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
CALM3-205ENST00000486500 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
CALM3-205ENST00000486500 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
CALM3-205ENST00000486500 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
CALM3-205ENST00000486500 KIF14Q15058 1648 aa17.17■□□□□ 0.34
CALM3-205ENST00000486500 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
CALM3-205ENST00000486500 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
CALM3-205ENST00000486500 KDM5CP41229 1560 aa17.16■□□□□ 0.34
CALM3-205ENST00000486500 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
CALM3-205ENST00000486500 CROCC2H7BZ55 1655 aa17.15■□□□□ 0.34
CALM3-205ENST00000486500 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
CALM3-205ENST00000486500 ADCY10Q96PN6 1610 aa17.14■□□□□ 0.33
CALM3-205ENST00000486500 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
CALM3-205ENST00000486500 UHRF1BP1Q6BDS2 1440 aa17.14■□□□□ 0.33
CALM3-205ENST00000486500 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
CALM3-205ENST00000486500 PLB1Q6P1J6 1458 aa17.13■□□□□ 0.33
CALM3-205ENST00000486500 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
CALM3-205ENST00000486500 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
CALM3-205ENST00000486500 TMC1Q8TDI8 760 aa17.11■□□□□ 0.33
CALM3-205ENST00000486500 CARD11Q9BXL7 1154 aa17.1■□□□□ 0.33
CALM3-205ENST00000486500 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
CALM3-205ENST00000486500 NUP155O75694 1391 aa17.09■□□□□ 0.33
CALM3-205ENST00000486500 CCDC136Q96JN2 1154 aa17.09■□□□□ 0.33
CALM3-205ENST00000486500 MYT1LQ9UL68 1186 aa17.08■□□□□ 0.33
CALM3-205ENST00000486500 ARHGEF12Q9NZN5 1544 aa17.08■□□□□ 0.32
CALM3-205ENST00000486500 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
CALM3-205ENST00000486500 CHMP7Q8WUX9 453 aaPredicted RBP17.06■□□□□ 0.32
CALM3-205ENST00000486500 SHANK2Q9UPX8 1470 aa17.06■□□□□ 0.32
CALM3-205ENST00000486500 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
CALM3-205ENST00000486500 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
CALM3-205ENST00000486500 CEP170Q5SW79 1584 aa17.05■□□□□ 0.32
CALM3-205ENST00000486500 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
CALM3-205ENST00000486500 PLEKHD1A6NEE1 506 aa17.05■□□□□ 0.32
CALM3-205ENST00000486500 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
CALM3-205ENST00000486500 LRPPRCP42704 1394 aaKnown RBP17.04■□□□□ 0.32
CALM3-205ENST00000486500 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
CALM3-205ENST00000486500 NOP58Q9Y2X3 529 aaKnown RBP17.04■□□□□ 0.32
CALM3-205ENST00000486500 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
CALM3-205ENST00000486500 RALBP1Q15311 655 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 KDM2AQ9Y2K7 1162 aa17.03■□□□□ 0.32
CALM3-205ENST00000486500 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
CALM3-205ENST00000486500 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms