RNA–Protein interactions for RNA: ENST00000486223.1

FREM1-208, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 3

Gene FREM1, Length 815 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-208ENST00000486223 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
FREM1-208ENST00000486223 HS3ST6Q96QI5 342 aa10.5□□□□□ -0.73
FREM1-208ENST00000486223 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 KIF3CO14782 793 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
FREM1-208ENST00000486223 GPR153Q6NV75 609 aa10.46□□□□□ -0.73
FREM1-208ENST00000486223 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
FREM1-208ENST00000486223 DOK7Q18PE1 504 aa10.43□□□□□ -0.74
FREM1-208ENST00000486223 HS6ST3Q8IZP7 471 aa10.43□□□□□ -0.74
FREM1-208ENST00000486223 C2orf72A6NCS6 295 aa10.42□□□□□ -0.74
FREM1-208ENST00000486223 NKX1-1Q15270 411 aaPredicted RBP10.42□□□□□ -0.74
FREM1-208ENST00000486223 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
FREM1-208ENST00000486223 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
FREM1-208ENST00000486223 MMRN1Q13201 1228 aa10.39□□□□□ -0.75
FREM1-208ENST00000486223 ARSIQ5FYB1 569 aa10.38□□□□□ -0.75
FREM1-208ENST00000486223 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
FREM1-208ENST00000486223 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
FREM1-208ENST00000486223 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
FREM1-208ENST00000486223 ERBB3P21860 1342 aa10.33□□□□□ -0.76
FREM1-208ENST00000486223 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
FREM1-208ENST00000486223 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
FREM1-208ENST00000486223 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
FREM1-208ENST00000486223 SLC34A2O95436 690 aa10.27□□□□□ -0.77
FREM1-208ENST00000486223 ZNF687Q8N1G0 1237 aa10.27□□□□□ -0.77
FREM1-208ENST00000486223 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
FREM1-208ENST00000486223 POTEEQ6S8J3 1075 aa10.25□□□□□ -0.77
FREM1-208ENST00000486223 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
FREM1-208ENST00000486223 NUDT7P0C024 238 aa10.24□□□□□ -0.77
FREM1-208ENST00000486223 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
FREM1-208ENST00000486223 DSG2Q14126 1118 aa10.22□□□□□ -0.77
FREM1-208ENST00000486223 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
FREM1-208ENST00000486223 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
FREM1-208ENST00000486223 FOXK1P85037 733 aa10.21□□□□□ -0.77
FREM1-208ENST00000486223 LHX6Q9UPM6 363 aa10.21□□□□□ -0.77
FREM1-208ENST00000486223 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
FREM1-208ENST00000486223 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
FREM1-208ENST00000486223 CRISPLD2Q9H0B8 497 aa10.17□□□□□ -0.78
FREM1-208ENST00000486223 NCKAP5LQ9HCH0 1330 aa10.16□□□□□ -0.78
FREM1-208ENST00000486223 AXIN2Q9Y2T1 843 aa10.12□□□□□ -0.79
FREM1-208ENST00000486223 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
FREM1-208ENST00000486223 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
FREM1-208ENST00000486223 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
FREM1-208ENST00000486223 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
FREM1-208ENST00000486223 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
FREM1-208ENST00000486223 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
FREM1-208ENST00000486223 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
FREM1-208ENST00000486223 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
FREM1-208ENST00000486223 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
FREM1-208ENST00000486223 PBX2P40425 430 aa10.02□□□□□ -0.81
FREM1-208ENST00000486223 PSEN2P49810 448 aa10.01□□□□□ -0.81
FREM1-208ENST00000486223 MFSD10Q14728 455 aa10.01□□□□□ -0.81
FREM1-208ENST00000486223 UPF1Q92900 1129 aaKnown RBP eCLIP10.01□□□□□ -0.81
FREM1-208ENST00000486223 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
FREM1-208ENST00000486223 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
FREM1-208ENST00000486223 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 PDE4AP27815 886 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 EMILIN3Q9NT22 766 aa9.98□□□□□ -0.81
FREM1-208ENST00000486223 ANO8Q9HCE9 1232 aaPredicted RBP9.97□□□□□ -0.81
FREM1-208ENST00000486223 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
FREM1-208ENST00000486223 HRO43593 1189 aa9.95□□□□□ -0.82
FREM1-208ENST00000486223 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
FREM1-208ENST00000486223 TBC1D12O60347 775 aa9.94□□□□□ -0.82
FREM1-208ENST00000486223 PTGER2P43116 358 aa9.93□□□□□ -0.82
FREM1-208ENST00000486223 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
FREM1-208ENST00000486223 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
FREM1-208ENST00000486223 FOSBP53539 338 aa9.92□□□□□ -0.82
FREM1-208ENST00000486223 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
FREM1-208ENST00000486223 EVI5O60447 810 aa9.9□□□□□ -0.82
FREM1-208ENST00000486223 TK2O00142 265 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 KCNK17Q96T54 332 aa9.89□□□□□ -0.83
FREM1-208ENST00000486223 BBXQ8WY36 941 aaPredicted RBP9.88□□□□□ -0.83
FREM1-208ENST00000486223 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
FREM1-208ENST00000486223 BCL2L12Q9HB09 334 aa9.87□□□□□ -0.83
FREM1-208ENST00000486223 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
FREM1-208ENST00000486223 VPS9D1Q9Y2B5 631 aa9.86□□□□□ -0.83
FREM1-208ENST00000486223 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
FREM1-208ENST00000486223 PCDHGA10Q9Y5H3 936 aa9.83□□□□□ -0.84
FREM1-208ENST00000486223 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
FREM1-208ENST00000486223 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
FREM1-208ENST00000486223 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
FREM1-208ENST00000486223 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
FREM1-208ENST00000486223 DPYSL4O14531 572 aa9.78□□□□□ -0.84
FREM1-208ENST00000486223 COL9A1P20849 921 aa9.77□□□□□ -0.85
FREM1-208ENST00000486223 PTPREP23469 700 aa9.75□□□□□ -0.85
FREM1-208ENST00000486223 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
FREM1-208ENST00000486223 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
FREM1-208ENST00000486223 HCSTQ9UBK5 93 aa9.73□□□□□ -0.85
FREM1-208ENST00000486223 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
FREM1-208ENST00000486223 PHF14O94880 888 aa9.71□□□□□ -0.86
FREM1-208ENST00000486223 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
FREM1-208ENST00000486223 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
FREM1-208ENST00000486223 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
FREM1-208ENST00000486223 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
FREM1-208ENST00000486223 PLA2G2EQ9NZK7 142 aa9.68□□□□□ -0.86
FREM1-208ENST00000486223 DDX12PQ92771 950 aa9.67□□□□□ -0.86
FREM1-208ENST00000486223 C6orf132Q5T0Z8 1188 aa9.66□□□□□ -0.86
FREM1-208ENST00000486223 THSD4Q6ZMP0 1018 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms