RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 CERKQ8TCT0 537 aa20.87■□□□□ 0.93
PABPC4-215ENST00000484555 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
PABPC4-215ENST00000484555 ATP10AO60312 1499 aa20.86■□□□□ 0.93
PABPC4-215ENST00000484555 MLECQ14165 292 aa20.85■□□□□ 0.93
PABPC4-215ENST00000484555 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
PABPC4-215ENST00000484555 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.93
PABPC4-215ENST00000484555 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.93
PABPC4-215ENST00000484555 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
PABPC4-215ENST00000484555 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
PABPC4-215ENST00000484555 MYO5CQ9NQX4 1742 aa20.78■□□□□ 0.92
PABPC4-215ENST00000484555 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
PABPC4-215ENST00000484555 ZNF518AQ6AHZ1 1483 aa20.76■□□□□ 0.91
PABPC4-215ENST00000484555 KDM5CP41229 1560 aa20.74■□□□□ 0.91
PABPC4-215ENST00000484555 CEBPAP49715 358 aaPredicted RBP20.74■□□□□ 0.91
PABPC4-215ENST00000484555 DMRT2Q9Y5R5 561 aa20.74■□□□□ 0.91
PABPC4-215ENST00000484555 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
PABPC4-215ENST00000484555 KIF14Q15058 1648 aa20.71■□□□□ 0.91
PABPC4-215ENST00000484555 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
PABPC4-215ENST00000484555 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
PABPC4-215ENST00000484555 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
PABPC4-215ENST00000484555 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
PABPC4-215ENST00000484555 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
PABPC4-215ENST00000484555 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
PABPC4-215ENST00000484555 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
PABPC4-215ENST00000484555 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
PABPC4-215ENST00000484555 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
PABPC4-215ENST00000484555 MLH3Q9UHC1 1453 aa20.68■□□□□ 0.9
PABPC4-215ENST00000484555 DIP2CQ9Y2E4 1556 aa20.68■□□□□ 0.9
PABPC4-215ENST00000484555 CLIP1P30622 1438 aa20.67■□□□□ 0.9
PABPC4-215ENST00000484555 AGLP35573 1532 aa20.64■□□□□ 0.9
PABPC4-215ENST00000484555 PTPRTO14522 1441 aa20.64■□□□□ 0.89
PABPC4-215ENST00000484555 CDC42BPBQ9Y5S2 1711 aa20.63■□□□□ 0.89
PABPC4-215ENST00000484555 LRRIQ1Q96JM4 1722 aa20.61■□□□□ 0.89
PABPC4-215ENST00000484555 C3P01024 1663 aa20.61■□□□□ 0.89
PABPC4-215ENST00000484555 ABCA6Q8N139 1617 aa20.61■□□□□ 0.89
PABPC4-215ENST00000484555 MYT1LQ9UL68 1186 aa20.61■□□□□ 0.89
PABPC4-215ENST00000484555 TRAPPC8Q9Y2L5 1435 aa20.59■□□□□ 0.89
PABPC4-215ENST00000484555 ABCC1P33527 1531 aa20.58■□□□□ 0.88
PABPC4-215ENST00000484555 PREX2Q70Z35 1606 aa20.57■□□□□ 0.88
PABPC4-215ENST00000484555 EHMT2Q96KQ7 1210 aa20.56■□□□□ 0.88
PABPC4-215ENST00000484555 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
PABPC4-215ENST00000484555 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
PABPC4-215ENST00000484555 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
PABPC4-215ENST00000484555 ILDR2Q71H61 639 aa20.55■□□□□ 0.88
PABPC4-215ENST00000484555 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
PABPC4-215ENST00000484555 CCDC18Q5T9S5 1454 aa20.54■□□□□ 0.88
PABPC4-215ENST00000484555 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
PABPC4-215ENST00000484555 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
PABPC4-215ENST00000484555 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
PABPC4-215ENST00000484555 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
PABPC4-215ENST00000484555 SOCS7O14512 581 aa20.52■□□□□ 0.88
PABPC4-215ENST00000484555 NCOA1Q15788 1441 aa20.52■□□□□ 0.87
PABPC4-215ENST00000484555 NPATQ14207 1427 aa20.5■□□□□ 0.87
PABPC4-215ENST00000484555 CDC42BPAQ5VT25 1732 aa20.48■□□□□ 0.87
PABPC4-215ENST00000484555 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
PABPC4-215ENST00000484555 SAMD9LQ8IVG5 1584 aa20.46■□□□□ 0.87
PABPC4-215ENST00000484555 ZMYM3Q14202 1370 aa20.45■□□□□ 0.86
PABPC4-215ENST00000484555 SPATA31D1Q6ZQQ2 1576 aa20.43■□□□□ 0.86
PABPC4-215ENST00000484555 CAMSAP1Q5T5Y3 1602 aa20.43■□□□□ 0.86
PABPC4-215ENST00000484555 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
PABPC4-215ENST00000484555 SPAG9O60271 1321 aaKnown RBP20.41■□□□□ 0.86
PABPC4-215ENST00000484555 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
PABPC4-215ENST00000484555 GPATCH8Q9UKJ3 1502 aaKnown RBP20.4■□□□□ 0.86
PABPC4-215ENST00000484555 KIAA1107Q9UPP5 1409 aa20.4■□□□□ 0.86
PABPC4-215ENST00000484555 SYCP2Q9BX26 1530 aa20.38■□□□□ 0.85
PABPC4-215ENST00000484555 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.851e-6■□□□□ 10.4
PABPC4-215ENST00000484555 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
PABPC4-215ENST00000484555 PKD2Q13563 968 aa20.37■□□□□ 0.85
PABPC4-215ENST00000484555 PLXNC1O60486 1568 aa20.37■□□□□ 0.85
PABPC4-215ENST00000484555 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
PABPC4-215ENST00000484555 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
PABPC4-215ENST00000484555 NCKAP5LQ9HCH0 1330 aa20.36■□□□□ 0.85
PABPC4-215ENST00000484555 ATP7AQ04656 1500 aa20.36■□□□□ 0.85
PABPC4-215ENST00000484555 PLEKHH2Q8IVE3 1493 aa20.36■□□□□ 0.85
PABPC4-215ENST00000484555 ZNF142P52746 1687 aaPredicted RBP20.35■□□□□ 0.85
PABPC4-215ENST00000484555 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
PABPC4-215ENST00000484555 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
PABPC4-215ENST00000484555 A2MP01023 1474 aa20.34■□□□□ 0.85
PABPC4-215ENST00000484555 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
PABPC4-215ENST00000484555 CLTCQ00610 1675 aaKnown RBP20.33■□□□□ 0.85
PABPC4-215ENST00000484555 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
PABPC4-215ENST00000484555 ZNF335Q9H4Z2 1342 aaPredicted RBP20.32■□□□□ 0.84
PABPC4-215ENST00000484555 MYO3AQ8NEV4 1616 aa20.32■□□□□ 0.84
PABPC4-215ENST00000484555 CFDP1Q9UEE9 299 aaPredicted RBP20.32■□□□□ 0.84
PABPC4-215ENST00000484555 CEP170BQ9Y4F5 1589 aaPredicted RBP20.3■□□□□ 0.84
PABPC4-215ENST00000484555 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
PABPC4-215ENST00000484555 GGT6Q6P531 493 aa20.28■□□□□ 0.84
PABPC4-215ENST00000484555 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
PABPC4-215ENST00000484555 ADGBQ8N7X0 1667 aa20.26■□□□□ 0.83
PABPC4-215ENST00000484555 RTEL1-TNFRSF6BF6WH68 1400 aa20.23■□□□□ 0.83
PABPC4-215ENST00000484555 A2ML1A8K2U0 1454 aa20.23■□□□□ 0.83
PABPC4-215ENST00000484555 MBD5Q9P267 1494 aa20.23■□□□□ 0.83
PABPC4-215ENST00000484555 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
PABPC4-215ENST00000484555 DNMT1P26358 1616 aaKnown RBP20.21■□□□□ 0.83
PABPC4-215ENST00000484555 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
PABPC4-215ENST00000484555 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
PABPC4-215ENST00000484555 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
PABPC4-215ENST00000484555 FAM135AQ9P2D6 1515 aa20.16■□□□□ 0.82
PABPC4-215ENST00000484555 CPS1P31327 1500 aa20.15■□□□□ 0.82
PABPC4-215ENST00000484555 NEURL4Q96JN8 1562 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms