RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
TTC3-218ENST00000484047 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
TTC3-218ENST00000484047 FAM117AQ9C073 453 aa16.06■□□□□ 0.16
TTC3-218ENST00000484047 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
TTC3-218ENST00000484047 MAP3K13O43283 966 aa16.03■□□□□ 0.16
TTC3-218ENST00000484047 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
TTC3-218ENST00000484047 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.15
TTC3-218ENST00000484047 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.14
TTC3-218ENST00000484047 KIF12Q96FN5 646 aa15.96■□□□□ 0.14
TTC3-218ENST00000484047 APBB1O00213 710 aa15.95■□□□□ 0.14
TTC3-218ENST00000484047 GPR37O15354 613 aa15.95■□□□□ 0.14
TTC3-218ENST00000484047 DPYSL4O14531 572 aa15.9■□□□□ 0.14
TTC3-218ENST00000484047 PPP1R15BQ5SWA1 713 aa15.9■□□□□ 0.14
TTC3-218ENST00000484047 EMILIN3Q9NT22 766 aa15.88■□□□□ 0.13
TTC3-218ENST00000484047 PDIA6Q15084 440 aa15.85■□□□□ 0.13
TTC3-218ENST00000484047 DDRGK1Q96HY6 314 aa15.84■□□□□ 0.13
TTC3-218ENST00000484047 FLIIQ13045 1269 aa15.82■□□□□ 0.12
TTC3-218ENST00000484047 GPHNQ9NQX3 736 aaPredicted RBP15.82■□□□□ 0.12
TTC3-218ENST00000484047 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
TTC3-218ENST00000484047 CCDC102AQ96A19 550 aa15.81■□□□□ 0.12
TTC3-218ENST00000484047 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
TTC3-218ENST00000484047 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
TTC3-218ENST00000484047 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
TTC3-218ENST00000484047 PARP9Q8IXQ6 854 aa15.8■□□□□ 0.12
TTC3-218ENST00000484047 SPDYE16A6NNV3 312 aaPredicted RBP15.79■□□□□ 0.12
TTC3-218ENST00000484047 AMHR2Q16671 573 aa15.77■□□□□ 0.12
TTC3-218ENST00000484047 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
TTC3-218ENST00000484047 IRF6O14896 467 aa15.75■□□□□ 0.11
TTC3-218ENST00000484047 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
TTC3-218ENST00000484047 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
TTC3-218ENST00000484047 CLUAP1Q96AJ1 413 aa15.74■□□□□ 0.11
TTC3-218ENST00000484047 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
TTC3-218ENST00000484047 DSG2Q14126 1118 aa15.73■□□□□ 0.11
TTC3-218ENST00000484047 NECTIN2Q92692 538 aa15.72■□□□□ 0.11
TTC3-218ENST00000484047 TMEM106CQ9BVX2 250 aa15.7■□□□□ 0.1
TTC3-218ENST00000484047 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
TTC3-218ENST00000484047 GOPCQ9HD26 462 aa15.68■□□□□ 0.1
TTC3-218ENST00000484047 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
TTC3-218ENST00000484047 TRAK2O60296 914 aa15.68■□□□□ 0.1
TTC3-218ENST00000484047 A6NJR5 290 aa15.67■□□□□ 0.1
TTC3-218ENST00000484047 FECHP22830 423 aa15.67■□□□□ 0.1
TTC3-218ENST00000484047 GRXCR2A6NFK2 248 aa15.66■□□□□ 0.1
TTC3-218ENST00000484047 GNPATO15228 680 aa15.63■□□□□ 0.09
TTC3-218ENST00000484047 TRPC6Q9Y210 931 aa15.63■□□□□ 0.09
TTC3-218ENST00000484047 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
TTC3-218ENST00000484047 TTLL12Q14166 644 aaPredicted RBP15.61■□□□□ 0.09
TTC3-218ENST00000484047 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
TTC3-218ENST00000484047 ILDR1Q86SU0 546 aaPredicted RBP15.6■□□□□ 0.09
TTC3-218ENST00000484047 FXR2P51116 673 aaKnown RBP eCLIP15.59■□□□□ 0.09
TTC3-218ENST00000484047 MS4A1P11836 297 aa15.58■□□□□ 0.09
TTC3-218ENST00000484047 FOXK1P85037 733 aa15.58■□□□□ 0.09
TTC3-218ENST00000484047 OSBPP22059 807 aa15.58■□□□□ 0.08
TTC3-218ENST00000484047 HIC1Q14526 733 aa15.56■□□□□ 0.08
TTC3-218ENST00000484047 MCM6Q14566 821 aa15.56■□□□□ 0.08
TTC3-218ENST00000484047 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
TTC3-218ENST00000484047 GIGYF2Q6Y7W6 1299 aaKnown RBP15.55■□□□□ 0.08
TTC3-218ENST00000484047 PCMTD1Q96MG8 357 aaPredicted RBP15.55■□□□□ 0.08
TTC3-218ENST00000484047 REPIN1Q9BWE0 567 aaKnown RBP15.53■□□□□ 0.08
TTC3-218ENST00000484047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.53■□□□□ 0.086e-8■■□□□ 13.9
TTC3-218ENST00000484047 FCHSD2O94868 740 aa15.51■□□□□ 0.07
TTC3-218ENST00000484047 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
TTC3-218ENST00000484047 PLPP6Q8IY26 295 aa15.51■□□□□ 0.07
TTC3-218ENST00000484047 TMC2Q8TDI7 906 aa15.51■□□□□ 0.07
TTC3-218ENST00000484047 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
TTC3-218ENST00000484047 MAP3K9P80192 1104 aa15.48■□□□□ 0.07
TTC3-218ENST00000484047 MICALL2Q8IY33 904 aa15.48■□□□□ 0.07
TTC3-218ENST00000484047 PRIM1P49642 420 aaKnown RBP15.46■□□□□ 0.07
TTC3-218ENST00000484047 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
TTC3-218ENST00000484047 POM121Q96HA1 1249 aa15.45■□□□□ 0.06
TTC3-218ENST00000484047 MS4A3Q96HJ5 214 aa15.45■□□□□ 0.06
TTC3-218ENST00000484047 DDX12PQ92771 950 aa15.45■□□□□ 0.06
TTC3-218ENST00000484047 SH3D19Q5HYK7 790 aa15.44■□□□□ 0.06
TTC3-218ENST00000484047 FNBP4Q8N3X1 1017 aaPredicted RBP15.44■□□□□ 0.06
TTC3-218ENST00000484047 OXER1Q8TDS5 423 aa15.44■□□□□ 0.06
TTC3-218ENST00000484047 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
TTC3-218ENST00000484047 PTGDRQ13258 359 aa15.43■□□□□ 0.06
TTC3-218ENST00000484047 C2orf72A6NCS6 295 aa15.41■□□□□ 0.06
TTC3-218ENST00000484047 PTGER2P43116 358 aa15.4■□□□□ 0.06
TTC3-218ENST00000484047 TRAIPQ9BWF2 469 aa15.4■□□□□ 0.06
TTC3-218ENST00000484047 TTLL13PA6NNM8 815 aa15.39■□□□□ 0.05
TTC3-218ENST00000484047 KCTD17Q8N5Z5 321 aa15.39■□□□□ 0.05
TTC3-218ENST00000484047 UPF1Q92900 1129 aaKnown RBP eCLIP15.39■□□□□ 0.05
TTC3-218ENST00000484047 KIF3CO14782 793 aa15.38■□□□□ 0.05
TTC3-218ENST00000484047 TMUB1Q9BVT8 246 aa15.37■□□□□ 0.05
TTC3-218ENST00000484047 SERPINA10Q9UK55 444 aa15.35■□□□□ 0.05
TTC3-218ENST00000484047 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
TTC3-218ENST00000484047 SKIV2LQ15477 1246 aaKnown RBP15.33■□□□□ 0.05
TTC3-218ENST00000484047 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.05
TTC3-218ENST00000484047 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.05
TTC3-218ENST00000484047 TIE1P35590 1138 aa15.33■□□□□ 0.04
TTC3-218ENST00000484047 PHOX2BQ99453 314 aa15.31■□□□□ 0.04
TTC3-218ENST00000484047 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
TTC3-218ENST00000484047 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
TTC3-218ENST00000484047 RAD21O60216 631 aa15.29■□□□□ 0.04
TTC3-218ENST00000484047 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
TTC3-218ENST00000484047 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
TTC3-218ENST00000484047 CLCN1P35523 988 aa15.28■□□□□ 0.04
TTC3-218ENST00000484047 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
TTC3-218ENST00000484047 TMEM121BQ9BXQ6 578 aaPredicted RBP15.27■□□□□ 0.04
TTC3-218ENST00000484047 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms