RNA–Protein interactions for RNA: ENST00000483831.1

ABCB1-206, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 642 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-206ENST00000483831 SOX12O15370 315 aa13.21□□□□□ -0.29
ABCB1-206ENST00000483831 ARSIQ5FYB1 569 aa13.2□□□□□ -0.3
ABCB1-206ENST00000483831 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
ABCB1-206ENST00000483831 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
ABCB1-206ENST00000483831 MS4A4AQ96JQ5 239 aa13.14□□□□□ -0.31
ABCB1-206ENST00000483831 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABCB1-206ENST00000483831 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
ABCB1-206ENST00000483831 PBX2P40425 430 aa13.08□□□□□ -0.32
ABCB1-206ENST00000483831 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
ABCB1-206ENST00000483831 PLA2G2EQ9NZK7 142 aa13.05□□□□□ -0.32
ABCB1-206ENST00000483831 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
ABCB1-206ENST00000483831 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
ABCB1-206ENST00000483831 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.33
ABCB1-206ENST00000483831 HCSTQ9UBK5 93 aa13.02□□□□□ -0.33
ABCB1-206ENST00000483831 NLRP6P59044 892 aa12.99□□□□□ -0.33
ABCB1-206ENST00000483831 NUDT7P0C024 238 aa12.97□□□□□ -0.33
ABCB1-206ENST00000483831 RNF25Q96BH1 459 aaPredicted RBP12.97□□□□□ -0.33
ABCB1-206ENST00000483831 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
ABCB1-206ENST00000483831 POTEEQ6S8J3 1075 aa12.93□□□□□ -0.34
ABCB1-206ENST00000483831 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
ABCB1-206ENST00000483831 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
ABCB1-206ENST00000483831 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
ABCB1-206ENST00000483831 KIF3CO14782 793 aa12.92□□□□□ -0.34
ABCB1-206ENST00000483831 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
ABCB1-206ENST00000483831 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
ABCB1-206ENST00000483831 SLC34A2O95436 690 aa12.89□□□□□ -0.35
ABCB1-206ENST00000483831 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
ABCB1-206ENST00000483831 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
ABCB1-206ENST00000483831 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
ABCB1-206ENST00000483831 SLC24A1O60721 1099 aa12.85□□□□□ -0.35
ABCB1-206ENST00000483831 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
ABCB1-206ENST00000483831 PSDA5PKW4 1024 aaPredicted RBP12.84□□□□□ -0.35
ABCB1-206ENST00000483831 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
ABCB1-206ENST00000483831 TK2O00142 265 aa12.8□□□□□ -0.36
ABCB1-206ENST00000483831 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
ABCB1-206ENST00000483831 ABCC9O60706 1549 aa12.78□□□□□ -0.36
ABCB1-206ENST00000483831 TMC2Q8TDI7 906 aa12.78□□□□□ -0.36
ABCB1-206ENST00000483831 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
ABCB1-206ENST00000483831 HRO43593 1189 aa12.74□□□□□ -0.37
ABCB1-206ENST00000483831 DMRTA1Q5VZB9 504 aa12.71□□□□□ -0.37
ABCB1-206ENST00000483831 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
ABCB1-206ENST00000483831 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
ABCB1-206ENST00000483831 PSEN2P49810 448 aa12.69□□□□□ -0.38
ABCB1-206ENST00000483831 STK25O00506 426 aa12.68□□□□□ -0.38
ABCB1-206ENST00000483831 KDM4FA0A1W2PPD8 638 aa12.67□□□□□ -0.38
ABCB1-206ENST00000483831 RGS20O76081 388 aa12.67□□□□□ -0.38
ABCB1-206ENST00000483831 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
ABCB1-206ENST00000483831 PTCD2Q8WV60 388 aaKnown RBP12.64□□□□□ -0.39
ABCB1-206ENST00000483831 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
ABCB1-206ENST00000483831 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
ABCB1-206ENST00000483831 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
ABCB1-206ENST00000483831 TBC1D12O60347 775 aa12.56□□□□□ -0.4
ABCB1-206ENST00000483831 PTPN5P54829 565 aa12.56□□□□□ -0.4
ABCB1-206ENST00000483831 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
ABCB1-206ENST00000483831 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
ABCB1-206ENST00000483831 CCDC180Q9P1Z9 1646 aa12.52□□□□□ -0.4
ABCB1-206ENST00000483831 FOXK1P85037 733 aa12.52□□□□□ -0.41
ABCB1-206ENST00000483831 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
ABCB1-206ENST00000483831 PPP1R37O75864 691 aa12.51□□□□□ -0.41
ABCB1-206ENST00000483831 A0A0G2JS52 829 aa12.49□□□□□ -0.41
ABCB1-206ENST00000483831 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
ABCB1-206ENST00000483831 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
ABCB1-206ENST00000483831 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
ABCB1-206ENST00000483831 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
ABCB1-206ENST00000483831 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
ABCB1-206ENST00000483831 DSG2Q14126 1118 aa12.41□□□□□ -0.42
ABCB1-206ENST00000483831 BHMG1C9JSJ3 638 aaPredicted RBP12.4□□□□□ -0.42
ABCB1-206ENST00000483831 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
ABCB1-206ENST00000483831 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
ABCB1-206ENST00000483831 WNT2BQ93097 391 aa12.39□□□□□ -0.43
ABCB1-206ENST00000483831 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
ABCB1-206ENST00000483831 RGL2O15211 777 aa12.36□□□□□ -0.43
ABCB1-206ENST00000483831 PTPREP23469 700 aa12.35□□□□□ -0.43
ABCB1-206ENST00000483831 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
ABCB1-206ENST00000483831 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
ABCB1-206ENST00000483831 FOSBP53539 338 aa12.3□□□□□ -0.44
ABCB1-206ENST00000483831 NBPF3Q9H094 633 aa12.3□□□□□ -0.44
ABCB1-206ENST00000483831 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
ABCB1-206ENST00000483831 Q6ZNB5 142 aa12.28□□□□□ -0.44
ABCB1-206ENST00000483831 ITGBL1O95965 494 aaPredicted RBP12.25□□□□□ -0.45
ABCB1-206ENST00000483831 PKD2Q13563 968 aa12.25□□□□□ -0.45
ABCB1-206ENST00000483831 JPH4Q96JJ6 628 aa12.24□□□□□ -0.45
ABCB1-206ENST00000483831 ZDHHC16Q969W1 377 aa12.21□□□□□ -0.45
ABCB1-206ENST00000483831 ANKK1Q8NFD2 765 aa12.2□□□□□ -0.46
ABCB1-206ENST00000483831 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
ABCB1-206ENST00000483831 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
ABCB1-206ENST00000483831 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
ABCB1-206ENST00000483831 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
ABCB1-206ENST00000483831 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
ABCB1-206ENST00000483831 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
ABCB1-206ENST00000483831 RABGEF1Q9UJ41 708 aa12.15□□□□□ -0.46
ABCB1-206ENST00000483831 EVI5O60447 810 aa12.14□□□□□ -0.47
ABCB1-206ENST00000483831 LAPTM4AQ15012 233 aa12.14□□□□□ -0.47
ABCB1-206ENST00000483831 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
ABCB1-206ENST00000483831 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
ABCB1-206ENST00000483831 BCAMP50895 628 aa12.1□□□□□ -0.47
ABCB1-206ENST00000483831 KCNC4Q03721 635 aa12.1□□□□□ -0.47
ABCB1-206ENST00000483831 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
ABCB1-206ENST00000483831 PROX2Q3B8N5 592 aa12.07□□□□□ -0.48
ABCB1-206ENST00000483831 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms