RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
LRRFIP1-212ENST00000483443 HECW1Q76N89 1606 aa21.29■■□□□ 1
LRRFIP1-212ENST00000483443 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
LRRFIP1-212ENST00000483443 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
LRRFIP1-212ENST00000483443 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
LRRFIP1-212ENST00000483443 PLCH2O75038 1416 aa21.27■■□□□ 1
LRRFIP1-212ENST00000483443 EHMT2Q96KQ7 1210 aa21.26■□□□□ 0.99
LRRFIP1-212ENST00000483443 LMTK3Q96Q04 1460 aa21.26■□□□□ 0.99
LRRFIP1-212ENST00000483443 ADRA2BP18089 450 aa21.25■□□□□ 0.99
LRRFIP1-212ENST00000483443 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
LRRFIP1-212ENST00000483443 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
LRRFIP1-212ENST00000483443 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
LRRFIP1-212ENST00000483443 EFCAB2Q5VUJ9 269 aa21.22■□□□□ 0.99
LRRFIP1-212ENST00000483443 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
LRRFIP1-212ENST00000483443 CLIP1P30622 1438 aa21.21■□□□□ 0.99
LRRFIP1-212ENST00000483443 KIF14Q15058 1648 aa21.2■□□□□ 0.98
LRRFIP1-212ENST00000483443 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
LRRFIP1-212ENST00000483443 MLECQ14165 292 aa21.19■□□□□ 0.98
LRRFIP1-212ENST00000483443 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
LRRFIP1-212ENST00000483443 ATP10AO60312 1499 aa21.16■□□□□ 0.98
LRRFIP1-212ENST00000483443 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
LRRFIP1-212ENST00000483443 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
LRRFIP1-212ENST00000483443 ARHGAP5Q13017 1502 aa21.14■□□□□ 0.98
LRRFIP1-212ENST00000483443 FER1L4A9Z1Z3 1794 aa21.14■□□□□ 0.97
LRRFIP1-212ENST00000483443 SIGLEC1Q9BZZ2 1709 aa21.13■□□□□ 0.97
LRRFIP1-212ENST00000483443 HSPA2P54652 639 aa21.12■□□□□ 0.97
LRRFIP1-212ENST00000483443 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
LRRFIP1-212ENST00000483443 ARHGEF12Q9NZN5 1544 aa21.1■□□□□ 0.97
LRRFIP1-212ENST00000483443 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
LRRFIP1-212ENST00000483443 KDM5CP41229 1560 aa21.07■□□□□ 0.96
LRRFIP1-212ENST00000483443 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
LRRFIP1-212ENST00000483443 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
LRRFIP1-212ENST00000483443 PREX1Q8TCU6 1659 aa21.01■□□□□ 0.95
LRRFIP1-212ENST00000483443 REREQ9P2R6 1566 aa21■□□□□ 0.95
LRRFIP1-212ENST00000483443 DIP2CQ9Y2E4 1556 aa21■□□□□ 0.95
LRRFIP1-212ENST00000483443 LRRIQ1Q96JM4 1722 aa21■□□□□ 0.95
LRRFIP1-212ENST00000483443 MLH3Q9UHC1 1453 aa21■□□□□ 0.95
LRRFIP1-212ENST00000483443 PREX2Q70Z35 1606 aa21■□□□□ 0.95
LRRFIP1-212ENST00000483443 ABCC1P33527 1531 aa20.99■□□□□ 0.95
LRRFIP1-212ENST00000483443 UHRF1BP1Q6BDS2 1440 aa20.98■□□□□ 0.95
LRRFIP1-212ENST00000483443 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
LRRFIP1-212ENST00000483443 CEBPAP49715 358 aaPredicted RBP20.97■□□□□ 0.95
LRRFIP1-212ENST00000483443 CDC42BPBQ9Y5S2 1711 aa20.97■□□□□ 0.95
LRRFIP1-212ENST00000483443 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
LRRFIP1-212ENST00000483443 CERKQ8TCT0 537 aa20.95■□□□□ 0.94
LRRFIP1-212ENST00000483443 DMRT2Q9Y5R5 561 aa20.95■□□□□ 0.94
LRRFIP1-212ENST00000483443 ABCA6Q8N139 1617 aa20.95■□□□□ 0.94
LRRFIP1-212ENST00000483443 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
LRRFIP1-212ENST00000483443 AGLP35573 1532 aa20.94■□□□□ 0.94
LRRFIP1-212ENST00000483443 ITSN2Q9NZM3 1697 aa20.93■□□□□ 0.94
LRRFIP1-212ENST00000483443 CNTLNQ9NXG0 1405 aa20.88■□□□□ 0.93
LRRFIP1-212ENST00000483443 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
LRRFIP1-212ENST00000483443 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
LRRFIP1-212ENST00000483443 C3P01024 1663 aa20.85■□□□□ 0.93
LRRFIP1-212ENST00000483443 SETD1BQ9UPS6 1966 aaKnown RBP20.85■□□□□ 0.93
LRRFIP1-212ENST00000483443 KIDINS220Q9ULH0 1771 aa20.85■□□□□ 0.93
LRRFIP1-212ENST00000483443 SAMD9LQ8IVG5 1584 aa20.84■□□□□ 0.93
LRRFIP1-212ENST00000483443 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.93
LRRFIP1-212ENST00000483443 SPAG9O60271 1321 aaKnown RBP20.83■□□□□ 0.93
LRRFIP1-212ENST00000483443 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
LRRFIP1-212ENST00000483443 GPATCH8Q9UKJ3 1502 aaKnown RBP20.82■□□□□ 0.92
LRRFIP1-212ENST00000483443 STRCQ7RTU9 1775 aa20.81■□□□□ 0.92
LRRFIP1-212ENST00000483443 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
LRRFIP1-212ENST00000483443 PTPRTO14522 1441 aa20.8■□□□□ 0.92
LRRFIP1-212ENST00000483443 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
LRRFIP1-212ENST00000483443 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
LRRFIP1-212ENST00000483443 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
LRRFIP1-212ENST00000483443 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■■■■□ 21.2
LRRFIP1-212ENST00000483443 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
LRRFIP1-212ENST00000483443 NPATQ14207 1427 aa20.77■□□□□ 0.91
LRRFIP1-212ENST00000483443 MROH2AA6NES4 1674 aa20.76■□□□□ 0.91
LRRFIP1-212ENST00000483443 NCOA1Q15788 1441 aa20.73■□□□□ 0.91
LRRFIP1-212ENST00000483443 A2MP01023 1474 aa20.73■□□□□ 0.91
LRRFIP1-212ENST00000483443 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
LRRFIP1-212ENST00000483443 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
LRRFIP1-212ENST00000483443 SUPT6HQ7KZ85 1726 aaKnown RBP20.72■□□□□ 0.91
LRRFIP1-212ENST00000483443 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
LRRFIP1-212ENST00000483443 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
LRRFIP1-212ENST00000483443 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
LRRFIP1-212ENST00000483443 GGT6Q6P531 493 aa20.67■□□□□ 0.9
LRRFIP1-212ENST00000483443 IQSEC2Q5JU85 1478 aa20.66■□□□□ 0.9
LRRFIP1-212ENST00000483443 CLTCQ00610 1675 aaKnown RBP20.66■□□□□ 0.9
LRRFIP1-212ENST00000483443 TIAM1Q13009 1591 aa20.65■□□□□ 0.9
LRRFIP1-212ENST00000483443 ADGBQ8N7X0 1667 aa20.64■□□□□ 0.9
LRRFIP1-212ENST00000483443 CEP162Q5TB80 1403 aa20.63■□□□□ 0.89
LRRFIP1-212ENST00000483443 LTBP4Q8N2S1 1624 aa20.63■□□□□ 0.89
LRRFIP1-212ENST00000483443 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
LRRFIP1-212ENST00000483443 PLA2R1Q13018 1463 aa20.62■□□□□ 0.89
LRRFIP1-212ENST00000483443 RTEL1-TNFRSF6BF6WH68 1400 aa20.61■□□□□ 0.89
LRRFIP1-212ENST00000483443 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
LRRFIP1-212ENST00000483443 DISP3Q9P2K9 1392 aa20.61■□□□□ 0.89
LRRFIP1-212ENST00000483443 ZNF142P52746 1687 aaPredicted RBP20.61■□□□□ 0.89
LRRFIP1-212ENST00000483443 ZNF644Q9H582 1327 aaPredicted RBP20.61■□□□□ 0.89
LRRFIP1-212ENST00000483443 CEP170BQ9Y4F5 1589 aaPredicted RBP20.6■□□□□ 0.89
LRRFIP1-212ENST00000483443 PKD2Q13563 968 aa20.6■□□□□ 0.89
LRRFIP1-212ENST00000483443 MBD5Q9P267 1494 aa20.6■□□□□ 0.89
LRRFIP1-212ENST00000483443 NCKAP5LQ9HCH0 1330 aa20.59■□□□□ 0.89
LRRFIP1-212ENST00000483443 DHX29Q7Z478 1369 aaKnown RBP20.57■□□□□ 0.88
LRRFIP1-212ENST00000483443 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
LRRFIP1-212ENST00000483443 TCOF1Q13428 1488 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms