RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
HDAC6-224ENST00000481929 SOCS7O14512 581 aa25.38■■□□□ 1.65
HDAC6-224ENST00000481929 PREX1Q8TCU6 1659 aa25.37■■□□□ 1.65
HDAC6-224ENST00000481929 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
HDAC6-224ENST00000481929 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
HDAC6-224ENST00000481929 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
HDAC6-224ENST00000481929 ATP10AO60312 1499 aa25.32■■□□□ 1.64
HDAC6-224ENST00000481929 C9orf84Q5VXU9 1444 aa25.31■■□□□ 1.64
HDAC6-224ENST00000481929 PLCH2O75038 1416 aa25.29■■□□□ 1.64
HDAC6-224ENST00000481929 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
HDAC6-224ENST00000481929 UHRF1BP1Q6BDS2 1440 aa25.26■■□□□ 1.63
HDAC6-224ENST00000481929 CDK13Q14004 1512 aaKnown RBP25.26■■□□□ 1.63
HDAC6-224ENST00000481929 STRCQ7RTU9 1775 aa25.26■■□□□ 1.63
HDAC6-224ENST00000481929 SPATA31D1Q6ZQQ2 1576 aa25.24■■□□□ 1.63
HDAC6-224ENST00000481929 EFCAB2Q5VUJ9 269 aa25.21■■□□□ 1.63
HDAC6-224ENST00000481929 EEA1Q15075 1411 aa25.19■■□□□ 1.62
HDAC6-224ENST00000481929 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
HDAC6-224ENST00000481929 PTPRTO14522 1441 aa25.18■■□□□ 1.62
HDAC6-224ENST00000481929 MYO5CQ9NQX4 1742 aa25.17■■□□□ 1.62
HDAC6-224ENST00000481929 ZNF518AQ6AHZ1 1483 aa25.17■■□□□ 1.62
HDAC6-224ENST00000481929 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
HDAC6-224ENST00000481929 KDM5CP41229 1560 aa25.12■■□□□ 1.61
HDAC6-224ENST00000481929 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
HDAC6-224ENST00000481929 ATP1B4Q9UN42 357 aaPredicted RBP25.09■■□□□ 1.61
HDAC6-224ENST00000481929 CDK11AQ9UQ88 783 aaPredicted RBP25.09■■□□□ 1.61
HDAC6-224ENST00000481929 DIP2CQ9Y2E4 1556 aa25.09■■□□□ 1.61
HDAC6-224ENST00000481929 ARHGAP5Q13017 1502 aa25.08■■□□□ 1.61
HDAC6-224ENST00000481929 REREQ9P2R6 1566 aa25.08■■□□□ 1.61
HDAC6-224ENST00000481929 IQSEC2Q5JU85 1478 aa25.08■■□□□ 1.6
HDAC6-224ENST00000481929 ESF1Q9H501 851 aaKnown RBP25.07■■□□□ 1.6
HDAC6-224ENST00000481929 KIF14Q15058 1648 aa25.07■■□□□ 1.6
HDAC6-224ENST00000481929 LTBP4Q8N2S1 1624 aa25.07■■□□□ 1.6
HDAC6-224ENST00000481929 C3P01024 1663 aa25.07■■□□□ 1.6
HDAC6-224ENST00000481929 FMN1Q68DA7 1419 aa25.04■■□□□ 1.6
HDAC6-224ENST00000481929 TRAPPC8Q9Y2L5 1435 aa25.03■■□□□ 1.6
HDAC6-224ENST00000481929 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
HDAC6-224ENST00000481929 CLIP1P30622 1438 aa25.01■■□□□ 1.59
HDAC6-224ENST00000481929 TROQ12816 1431 aaPredicted RBP25.01■■□□□ 1.59
HDAC6-224ENST00000481929 NCOA1Q15788 1441 aa25.01■■□□□ 1.59
HDAC6-224ENST00000481929 MLH3Q9UHC1 1453 aa25.01■■□□□ 1.59
HDAC6-224ENST00000481929 AGLP35573 1532 aa25.01■■□□□ 1.59
HDAC6-224ENST00000481929 CNTLNQ9NXG0 1405 aa24.96■■□□□ 1.59
HDAC6-224ENST00000481929 CAMSAP1Q5T5Y3 1602 aa24.91■■□□□ 1.58
HDAC6-224ENST00000481929 CDC42BPBQ9Y5S2 1711 aa24.91■■□□□ 1.58
HDAC6-224ENST00000481929 ABCC1P33527 1531 aa24.91■■□□□ 1.58
HDAC6-224ENST00000481929 ARHGAP35Q9NRY4 1499 aa24.9■■□□□ 1.58
HDAC6-224ENST00000481929 NPATQ14207 1427 aa24.89■■□□□ 1.58
HDAC6-224ENST00000481929 UBAP1LF5GYI3 381 aa24.88■■□□□ 1.57
HDAC6-224ENST00000481929 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
HDAC6-224ENST00000481929 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
HDAC6-224ENST00000481929 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
HDAC6-224ENST00000481929 KIDINS220Q9ULH0 1771 aa24.85■■□□□ 1.57
HDAC6-224ENST00000481929 ZNF335Q9H4Z2 1342 aaPredicted RBP24.85■■□□□ 1.57
HDAC6-224ENST00000481929 MROH2AA6NES4 1674 aa24.85■■□□□ 1.57
HDAC6-224ENST00000481929 NCKAP5LQ9HCH0 1330 aa24.84■■□□□ 1.57
HDAC6-224ENST00000481929 EHMT2Q96KQ7 1210 aa24.83■■□□□ 1.57
HDAC6-224ENST00000481929 LRRIQ1Q96JM4 1722 aa24.82■■□□□ 1.56
HDAC6-224ENST00000481929 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
HDAC6-224ENST00000481929 PLA2R1Q13018 1463 aa24.78■■□□□ 1.56
HDAC6-224ENST00000481929 PKD2Q13563 968 aa24.78■■□□□ 1.56
HDAC6-224ENST00000481929 SAMD9LQ8IVG5 1584 aa24.76■■□□□ 1.55
HDAC6-224ENST00000481929 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
HDAC6-224ENST00000481929 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
HDAC6-224ENST00000481929 CCDC18Q5T9S5 1454 aa24.74■■□□□ 1.55
HDAC6-224ENST00000481929 TCOF1Q13428 1488 aaKnown RBP24.73■■□□□ 1.55
HDAC6-224ENST00000481929 CDC42BPAQ5VT25 1732 aa24.72■■□□□ 1.55
HDAC6-224ENST00000481929 CEP170BQ9Y4F5 1589 aaPredicted RBP24.72■■□□□ 1.55
HDAC6-224ENST00000481929 SPAG9O60271 1321 aaKnown RBP24.72■■□□□ 1.55
HDAC6-224ENST00000481929 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
HDAC6-224ENST00000481929 SUPT6HQ7KZ85 1726 aaKnown RBP24.71■■□□□ 1.55
HDAC6-224ENST00000481929 CLTCQ00610 1675 aaKnown RBP24.71■■□□□ 1.55
HDAC6-224ENST00000481929 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.54
HDAC6-224ENST00000481929 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
HDAC6-224ENST00000481929 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
HDAC6-224ENST00000481929 CASKIN1Q8WXD9 1431 aa24.68■■□□□ 1.54
HDAC6-224ENST00000481929 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
HDAC6-224ENST00000481929 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
HDAC6-224ENST00000481929 MED1Q15648 1581 aaPredicted RBP24.66■■□□□ 1.54
HDAC6-224ENST00000481929 PLXNC1O60486 1568 aa24.65■■□□□ 1.54
HDAC6-224ENST00000481929 A2MP01023 1474 aa24.64■■□□□ 1.54
HDAC6-224ENST00000481929 HSPA1LP34931 641 aa24.63■■□□□ 1.53
HDAC6-224ENST00000481929 HNRNPMP52272 730 aaKnown RBP eCLIP24.63■■□□□ 1.53
HDAC6-224ENST00000481929 GGT6Q6P531 493 aa24.63■■□□□ 1.53
HDAC6-224ENST00000481929 PIP4K2BP78356 416 aa24.61■■□□□ 1.53
HDAC6-224ENST00000481929 INO80Q9ULG1 1556 aaPredicted RBP24.61■■□□□ 1.53
HDAC6-224ENST00000481929 TOM1O60784 492 aa24.6■■□□□ 1.53
HDAC6-224ENST00000481929 GPATCH8Q9UKJ3 1502 aaKnown RBP24.6■■□□□ 1.53
HDAC6-224ENST00000481929 A2ML1A8K2U0 1454 aa24.59■■□□□ 1.53
HDAC6-224ENST00000481929 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.53
HDAC6-224ENST00000481929 CPS1P31327 1500 aa24.58■■□□□ 1.53
HDAC6-224ENST00000481929 KIAA1107Q9UPP5 1409 aa24.58■■□□□ 1.53
HDAC6-224ENST00000481929 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
HDAC6-224ENST00000481929 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
HDAC6-224ENST00000481929 CFDP1Q9UEE9 299 aaPredicted RBP24.54■■□□□ 1.52
HDAC6-224ENST00000481929 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
HDAC6-224ENST00000481929 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
HDAC6-224ENST00000481929 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
HDAC6-224ENST00000481929 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
HDAC6-224ENST00000481929 NEURL4Q96JN8 1562 aa24.5■■□□□ 1.51
HDAC6-224ENST00000481929 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms