RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 FOXD1Q16676 465 aa13.49□□□□□ -0.25
PRPF4B-206ENST00000481109 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
PRPF4B-206ENST00000481109 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
PRPF4B-206ENST00000481109 CUX2O14529 1486 aa13.48□□□□□ -0.25
PRPF4B-206ENST00000481109 HAP1P54257 671 aaPredicted RBP13.47□□□□□ -0.25
PRPF4B-206ENST00000481109 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
PRPF4B-206ENST00000481109 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
PRPF4B-206ENST00000481109 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
PRPF4B-206ENST00000481109 ZBED9Q6R2W3 1325 aa13.46□□□□□ -0.25
PRPF4B-206ENST00000481109 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
PRPF4B-206ENST00000481109 FRAT2O75474 233 aaPredicted RBP13.46□□□□□ -0.25
PRPF4B-206ENST00000481109 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
PRPF4B-206ENST00000481109 ESPNB1AK53 854 aa13.44□□□□□ -0.26
PRPF4B-206ENST00000481109 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
PRPF4B-206ENST00000481109 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
PRPF4B-206ENST00000481109 LETM1O95202 739 aaPredicted RBP13.43□□□□□ -0.26
PRPF4B-206ENST00000481109 MMP14P50281 582 aa13.42□□□□□ -0.26
PRPF4B-206ENST00000481109 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
PRPF4B-206ENST00000481109 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
PRPF4B-206ENST00000481109 XRCC6P12956 609 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRPF4B-206ENST00000481109 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
PRPF4B-206ENST00000481109 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
PRPF4B-206ENST00000481109 SLC20A2Q08357 652 aa13.4□□□□□ -0.26
PRPF4B-206ENST00000481109 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
PRPF4B-206ENST00000481109 RIPK4P57078 832 aa13.39□□□□□ -0.27
PRPF4B-206ENST00000481109 KIAA1211Q6ZU35 1233 aa13.39□□□□□ -0.27
PRPF4B-206ENST00000481109 C14orf37Q86TY3 774 aa13.39□□□□□ -0.27
PRPF4B-206ENST00000481109 GOLGA6L3A6NEY3 463 aa13.37□□□□□ -0.27
PRPF4B-206ENST00000481109 POGKQ9P215 609 aa13.37□□□□□ -0.27
PRPF4B-206ENST00000481109 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
PRPF4B-206ENST00000481109 VGLL3A8MV65 326 aa13.37□□□□□ -0.27
PRPF4B-206ENST00000481109 CLGNO14967 610 aa13.36□□□□□ -0.27
PRPF4B-206ENST00000481109 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
PRPF4B-206ENST00000481109 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
PRPF4B-206ENST00000481109 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
PRPF4B-206ENST00000481109 CDK11BP21127 795 aaKnown RBP13.35□□□□□ -0.27
PRPF4B-206ENST00000481109 SIN3AQ96ST3 1273 aa13.35□□□□□ -0.27
PRPF4B-206ENST00000481109 OFD1O75665 1012 aa13.34□□□□□ -0.27
PRPF4B-206ENST00000481109 MRE11P49959 708 aa13.33□□□□□ -0.28
PRPF4B-206ENST00000481109 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
PRPF4B-206ENST00000481109 TRIM44Q96DX7 344 aaPredicted RBP13.33□□□□□ -0.28
PRPF4B-206ENST00000481109 CNPY4Q8N129 248 aa13.32□□□□□ -0.28
PRPF4B-206ENST00000481109 CCDC94Q9BW85 323 aaPredicted RBP13.32□□□□□ -0.28
PRPF4B-206ENST00000481109 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
PRPF4B-206ENST00000481109 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
PRPF4B-206ENST00000481109 DNTTIP2Q5QJE6 756 aaKnown RBP13.3□□□□□ -0.28
PRPF4B-206ENST00000481109 AXDND1Q5T1B0 1012 aaPredicted RBP13.3□□□□□ -0.28
PRPF4B-206ENST00000481109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF4B-206ENST00000481109 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
PRPF4B-206ENST00000481109 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
PRPF4B-206ENST00000481109 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
PRPF4B-206ENST00000481109 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
PRPF4B-206ENST00000481109 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
PRPF4B-206ENST00000481109 ZNF622Q969S3 477 aaKnown RBP eCLIP13.28□□□□□ -0.283e-8■■■□□ 17.1
PRPF4B-206ENST00000481109 PHLDB1Q86UU1 1377 aa13.27□□□□□ -0.28
PRPF4B-206ENST00000481109 PRDM10Q9NQV6 1147 aa13.27□□□□□ -0.29
PRPF4B-206ENST00000481109 AKNAQ7Z591 1439 aa13.27□□□□□ -0.29
PRPF4B-206ENST00000481109 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
PRPF4B-206ENST00000481109 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
PRPF4B-206ENST00000481109 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
PRPF4B-206ENST00000481109 PTMSP20962 102 aa13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 PTMAP06454 111 aaKnown RBP13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 PSEN1P49768 467 aa13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 HDAC5Q9UQL6 1122 aa13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
PRPF4B-206ENST00000481109 YY1AP1Q9H869 796 aa13.24□□□□□ -0.29
PRPF4B-206ENST00000481109 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
PRPF4B-206ENST00000481109 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
PRPF4B-206ENST00000481109 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
PRPF4B-206ENST00000481109 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
PRPF4B-206ENST00000481109 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
PRPF4B-206ENST00000481109 FAM193AP78312 1265 aa13.21□□□□□ -0.3
PRPF4B-206ENST00000481109 ARID3AQ99856 593 aa13.21□□□□□ -0.3
PRPF4B-206ENST00000481109 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
PRPF4B-206ENST00000481109 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
PRPF4B-206ENST00000481109 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
PRPF4B-206ENST00000481109 CLIP1P30622 1438 aa13.19□□□□□ -0.3
PRPF4B-206ENST00000481109 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
PRPF4B-206ENST00000481109 SLC52A1Q9NWF4 448 aa13.18□□□□□ -0.3
PRPF4B-206ENST00000481109 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
PRPF4B-206ENST00000481109 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
PRPF4B-206ENST00000481109 UQCRHP07919 91 aa13.16□□□□□ -0.3
PRPF4B-206ENST00000481109 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
PRPF4B-206ENST00000481109 APPP05067 770 aa13.14□□□□□ -0.31
PRPF4B-206ENST00000481109 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
PRPF4B-206ENST00000481109 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
PRPF4B-206ENST00000481109 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 SOX12O15370 315 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 PHF14O94880 888 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 MCCP23508 829 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 HS1BP3Q53T59 392 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 CGNQ9P2M7 1197 aaKnown RBP13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 RALBP1Q15311 655 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
PRPF4B-206ENST00000481109 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
PRPF4B-206ENST00000481109 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
PRPF4B-206ENST00000481109 ZNF500O60304 480 aaPredicted RBP13.12□□□□□ -0.31
PRPF4B-206ENST00000481109 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
PRPF4B-206ENST00000481109 BECN1Q14457 450 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms