RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 RIMBP2O15034 1052 aa12.51□□□□□ -0.41
ITGB1-212ENST00000480226 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-212ENST00000480226 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
ITGB1-212ENST00000480226 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
ITGB1-212ENST00000480226 EMP3P54852 163 aa12.46□□□□□ -0.41
ITGB1-212ENST00000480226 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
ITGB1-212ENST00000480226 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
ITGB1-212ENST00000480226 KIF3CO14782 793 aa12.45□□□□□ -0.42
ITGB1-212ENST00000480226 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
ITGB1-212ENST00000480226 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
ITGB1-212ENST00000480226 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
ITGB1-212ENST00000480226 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
ITGB1-212ENST00000480226 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
ITGB1-212ENST00000480226 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
ITGB1-212ENST00000480226 GTPBP6O43824 516 aaPredicted RBP12.37□□□□□ -0.43
ITGB1-212ENST00000480226 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
ITGB1-212ENST00000480226 HS3ST6Q96QI5 342 aa12.35□□□□□ -0.43
ITGB1-212ENST00000480226 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
ITGB1-212ENST00000480226 ERBB3P21860 1342 aa12.33□□□□□ -0.44
ITGB1-212ENST00000480226 ARSIQ5FYB1 569 aa12.32□□□□□ -0.44
ITGB1-212ENST00000480226 SLC34A2O95436 690 aa12.3□□□□□ -0.44
ITGB1-212ENST00000480226 FOXK1P85037 733 aa12.3□□□□□ -0.44
ITGB1-212ENST00000480226 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
ITGB1-212ENST00000480226 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
ITGB1-212ENST00000480226 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
ITGB1-212ENST00000480226 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
ITGB1-212ENST00000480226 DSG2Q14126 1118 aa12.25□□□□□ -0.45
ITGB1-212ENST00000480226 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.454e-6■■□□□ 14.1
ITGB1-212ENST00000480226 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
ITGB1-212ENST00000480226 PDE4AP27815 886 aa12.24□□□□□ -0.45
ITGB1-212ENST00000480226 VARS2Q5ST30 1063 aaKnown RBP12.24□□□□□ -0.45
ITGB1-212ENST00000480226 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
ITGB1-212ENST00000480226 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-212ENST00000480226 NUDT7P0C024 238 aa12.2□□□□□ -0.46
ITGB1-212ENST00000480226 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
ITGB1-212ENST00000480226 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
ITGB1-212ENST00000480226 TBC1D12O60347 775 aa12.18□□□□□ -0.46
ITGB1-212ENST00000480226 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
ITGB1-212ENST00000480226 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
ITGB1-212ENST00000480226 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
ITGB1-212ENST00000480226 KRTAP3-3Q9BYR6 98 aa12.17□□□□□ -0.46
ITGB1-212ENST00000480226 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
ITGB1-212ENST00000480226 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
ITGB1-212ENST00000480226 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
ITGB1-212ENST00000480226 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
ITGB1-212ENST00000480226 SPNS2Q8IVW8 549 aa12.12□□□□□ -0.47
ITGB1-212ENST00000480226 DDX27Q96GQ7 796 aaKnown RBP12.12□□□□□ -0.47
ITGB1-212ENST00000480226 MFSD10Q14728 455 aa12.1□□□□□ -0.47
ITGB1-212ENST00000480226 PSDA5PKW4 1024 aaPredicted RBP12.09□□□□□ -0.47
ITGB1-212ENST00000480226 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
ITGB1-212ENST00000480226 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
ITGB1-212ENST00000480226 KDM4FA0A1W2PPD8 638 aa12.08□□□□□ -0.48
ITGB1-212ENST00000480226 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
ITGB1-212ENST00000480226 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-212ENST00000480226 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
ITGB1-212ENST00000480226 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
ITGB1-212ENST00000480226 PBX2P40425 430 aa12.03□□□□□ -0.48
ITGB1-212ENST00000480226 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
ITGB1-212ENST00000480226 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
ITGB1-212ENST00000480226 ANKRD13DQ6ZTN6 518 aa11.97□□□□□ -0.49
ITGB1-212ENST00000480226 EVI5O60447 810 aa11.96□□□□□ -0.49
ITGB1-212ENST00000480226 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
ITGB1-212ENST00000480226 ARHGAP33O14559 1287 aa11.95□□□□□ -0.5
ITGB1-212ENST00000480226 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
ITGB1-212ENST00000480226 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
ITGB1-212ENST00000480226 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
ITGB1-212ENST00000480226 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
ITGB1-212ENST00000480226 PTGER2P43116 358 aa11.92□□□□□ -0.5
ITGB1-212ENST00000480226 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
ITGB1-212ENST00000480226 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
ITGB1-212ENST00000480226 KCNH8Q96L42 1107 aa11.9□□□□□ -0.5
ITGB1-212ENST00000480226 WDR70Q9NW82 654 aa11.89□□□□□ -0.51
ITGB1-212ENST00000480226 FOSBP53539 338 aa11.88□□□□□ -0.51
ITGB1-212ENST00000480226 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
ITGB1-212ENST00000480226 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
ITGB1-212ENST00000480226 PSEN2P49810 448 aa11.86□□□□□ -0.51
ITGB1-212ENST00000480226 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
ITGB1-212ENST00000480226 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
ITGB1-212ENST00000480226 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
ITGB1-212ENST00000480226 TK2O00142 265 aa11.83□□□□□ -0.52
ITGB1-212ENST00000480226 DPYSL4O14531 572 aa11.83□□□□□ -0.52
ITGB1-212ENST00000480226 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
ITGB1-212ENST00000480226 E2F4Q16254 413 aa11.82□□□□□ -0.52
ITGB1-212ENST00000480226 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
ITGB1-212ENST00000480226 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
ITGB1-212ENST00000480226 PTPREP23469 700 aa11.8□□□□□ -0.52
ITGB1-212ENST00000480226 PHF14O94880 888 aa11.78□□□□□ -0.52
ITGB1-212ENST00000480226 PCDHGA10Q9Y5H3 936 aa11.78□□□□□ -0.52
ITGB1-212ENST00000480226 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
ITGB1-212ENST00000480226 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
ITGB1-212ENST00000480226 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
ITGB1-212ENST00000480226 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
ITGB1-212ENST00000480226 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-212ENST00000480226 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
ITGB1-212ENST00000480226 EPAS1Q99814 870 aa11.74□□□□□ -0.53
ITGB1-212ENST00000480226 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
ITGB1-212ENST00000480226 HRO43593 1189 aa11.73□□□□□ -0.53
ITGB1-212ENST00000480226 PDIA6Q15084 440 aa11.72□□□□□ -0.53
ITGB1-212ENST00000480226 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
ITGB1-212ENST00000480226 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms