RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
PKP4-210ENST00000480171 IQGAP2Q13576 1575 aa12.05□□□□□ -0.48
PKP4-210ENST00000480171 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
PKP4-210ENST00000480171 MPHOSPH9Q99550 1183 aa12.03□□□□□ -0.48
PKP4-210ENST00000480171 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
PKP4-210ENST00000480171 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
PKP4-210ENST00000480171 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
PKP4-210ENST00000480171 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
PKP4-210ENST00000480171 WDR62O43379 1518 aa12□□□□□ -0.49
PKP4-210ENST00000480171 DENND4BO75064 1496 aaPredicted RBP12□□□□□ -0.49
PKP4-210ENST00000480171 ADAMTS12P58397 1594 aa12□□□□□ -0.49
PKP4-210ENST00000480171 ROCK1Q13464 1354 aa11.99□□□□□ -0.49
PKP4-210ENST00000480171 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
PKP4-210ENST00000480171 L3MBTL2Q969R5 705 aa11.99□□□□□ -0.49
PKP4-210ENST00000480171 KDM6BO15054 1643 aa11.99□□□□□ -0.49
PKP4-210ENST00000480171 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
PKP4-210ENST00000480171 CCDC7Q96M83 1385 aa11.96□□□□□ -0.49
PKP4-210ENST00000480171 DAPK1P53355 1430 aa11.96□□□□□ -0.49
PKP4-210ENST00000480171 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
PKP4-210ENST00000480171 NCOA1Q15788 1441 aa11.95□□□□□ -0.5
PKP4-210ENST00000480171 RPRD2Q5VT52 1461 aaKnown RBP11.95□□□□□ -0.5
PKP4-210ENST00000480171 ANKRD30BQ9BXX2 1392 aa11.95□□□□□ -0.5
PKP4-210ENST00000480171 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
PKP4-210ENST00000480171 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
PKP4-210ENST00000480171 FOXD1Q16676 465 aa11.93□□□□□ -0.5
PKP4-210ENST00000480171 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
PKP4-210ENST00000480171 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
PKP4-210ENST00000480171 ABCC5O15440 1437 aa11.93□□□□□ -0.5
PKP4-210ENST00000480171 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
PKP4-210ENST00000480171 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
PKP4-210ENST00000480171 MRS2Q9HD23 443 aa11.91□□□□□ -0.5
PKP4-210ENST00000480171 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
PKP4-210ENST00000480171 KIAA0556O60303 1618 aa11.91□□□□□ -0.5
PKP4-210ENST00000480171 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
PKP4-210ENST00000480171 TEX14Q8IWB6 1497 aa11.9□□□□□ -0.5
PKP4-210ENST00000480171 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.51
PKP4-210ENST00000480171 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.51
PKP4-210ENST00000480171 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.51
PKP4-210ENST00000480171 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.51
PKP4-210ENST00000480171 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
PKP4-210ENST00000480171 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
PKP4-210ENST00000480171 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
PKP4-210ENST00000480171 POLR1AO95602 1720 aaPredicted RBP11.89□□□□□ -0.51
PKP4-210ENST00000480171 NUP153P49790 1475 aaKnown RBP11.88□□□□□ -0.51
PKP4-210ENST00000480171 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
PKP4-210ENST00000480171 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
PKP4-210ENST00000480171 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
PKP4-210ENST00000480171 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
PKP4-210ENST00000480171 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
PKP4-210ENST00000480171 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
PKP4-210ENST00000480171 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
PKP4-210ENST00000480171 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
PKP4-210ENST00000480171 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
PKP4-210ENST00000480171 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
PKP4-210ENST00000480171 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
PKP4-210ENST00000480171 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
PKP4-210ENST00000480171 PZPP20742 1482 aa11.84□□□□□ -0.51
PKP4-210ENST00000480171 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
PKP4-210ENST00000480171 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
PKP4-210ENST00000480171 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
PKP4-210ENST00000480171 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
PKP4-210ENST00000480171 ANKRD30AQ9BXX3 1397 aa11.82□□□□□ -0.52
PKP4-210ENST00000480171 ADGRL2O95490 1459 aa11.82□□□□□ -0.52
PKP4-210ENST00000480171 PRG4Q92954 1404 aaPredicted RBP11.81□□□□□ -0.52
PKP4-210ENST00000480171 USP47Q96K76 1375 aa11.8□□□□□ -0.52
PKP4-210ENST00000480171 GPATCH8Q9UKJ3 1502 aaKnown RBP11.8□□□□□ -0.52
PKP4-210ENST00000480171 MBD5Q9P267 1494 aa11.8□□□□□ -0.52
PKP4-210ENST00000480171 ZNF777Q9ULD5 760 aaPredicted RBP11.8□□□□□ -0.52
PKP4-210ENST00000480171 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
PKP4-210ENST00000480171 KIF14Q15058 1648 aa11.79□□□□□ -0.52
PKP4-210ENST00000480171 PKD2Q13563 968 aa11.79□□□□□ -0.52
PKP4-210ENST00000480171 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
PKP4-210ENST00000480171 MSH5O43196 834 aa11.79□□□□□ -0.52
PKP4-210ENST00000480171 ZNF326Q5BKZ1 582 aaKnown RBP11.79□□□□□ -0.52
PKP4-210ENST00000480171 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
PKP4-210ENST00000480171 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
PKP4-210ENST00000480171 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
PKP4-210ENST00000480171 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
PKP4-210ENST00000480171 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
PKP4-210ENST00000480171 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
PKP4-210ENST00000480171 DHX29Q7Z478 1369 aaKnown RBP11.77□□□□□ -0.53
PKP4-210ENST00000480171 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.53
PKP4-210ENST00000480171 B4GALNT3Q6L9W6 998 aa11.77□□□□□ -0.53
PKP4-210ENST00000480171 CHMP7Q8WUX9 453 aaPredicted RBP11.77□□□□□ -0.53
PKP4-210ENST00000480171 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
PKP4-210ENST00000480171 PLB1Q6P1J6 1458 aa11.76□□□□□ -0.53
PKP4-210ENST00000480171 NUDCQ9Y266 331 aa11.75□□□□□ -0.53
PKP4-210ENST00000480171 KDM5CP41229 1560 aa11.75□□□□□ -0.53
PKP4-210ENST00000480171 UHRF1BP1Q6BDS2 1440 aa11.75□□□□□ -0.53
PKP4-210ENST00000480171 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 BCORL1Q5H9F3 1711 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 SHANK2Q9UPX8 1470 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
PKP4-210ENST00000480171 NUP155O75694 1391 aa11.73□□□□□ -0.53
PKP4-210ENST00000480171 CARD11Q9BXL7 1154 aa11.73□□□□□ -0.53
PKP4-210ENST00000480171 TSPY4P0CV99 314 aa11.73□□□□□ -0.53
PKP4-210ENST00000480171 TSPY10P0CW01 314 aa11.73□□□□□ -0.53
PKP4-210ENST00000480171 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms