RNA–Protein interactions for RNA: ENST00000480112.5

CDK5RAP2-212, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 5,826 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-212ENST00000480112 KANK1Q14678 1352 aa16.23■□□□□ 0.19
CDK5RAP2-212ENST00000480112 HSPA5P11021 654 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP2-212ENST00000480112 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
CDK5RAP2-212ENST00000480112 POGKQ9P215 609 aa16.2■□□□□ 0.18
CDK5RAP2-212ENST00000480112 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
CDK5RAP2-212ENST00000480112 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
CDK5RAP2-212ENST00000480112 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
CDK5RAP2-212ENST00000480112 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP2-212ENST00000480112 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
CDK5RAP2-212ENST00000480112 U2SURPO15042 1029 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP2-212ENST00000480112 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
CDK5RAP2-212ENST00000480112 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
CDK5RAP2-212ENST00000480112 TPM4P67936 248 aa16.16■□□□□ 0.18
CDK5RAP2-212ENST00000480112 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
CDK5RAP2-212ENST00000480112 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.18
CDK5RAP2-212ENST00000480112 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
CDK5RAP2-212ENST00000480112 PHF14O94880 888 aa16.14■□□□□ 0.17
CDK5RAP2-212ENST00000480112 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
CDK5RAP2-212ENST00000480112 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
CDK5RAP2-212ENST00000480112 EIF3AQ14152 1382 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP2-212ENST00000480112 HDGFP51858 240 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP2-212ENST00000480112 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
CDK5RAP2-212ENST00000480112 CCDC34Q96HJ3 373 aa16.09■□□□□ 0.17
CDK5RAP2-212ENST00000480112 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
CDK5RAP2-212ENST00000480112 NAP1L2Q9ULW6 460 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP2-212ENST00000480112 HDAC5Q9UQL6 1122 aa16.09■□□□□ 0.17
CDK5RAP2-212ENST00000480112 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
CDK5RAP2-212ENST00000480112 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP2-212ENST00000480112 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
CDK5RAP2-212ENST00000480112 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
CDK5RAP2-212ENST00000480112 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
CDK5RAP2-212ENST00000480112 TNNT3P45378 269 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP2-212ENST00000480112 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
CDK5RAP2-212ENST00000480112 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
CDK5RAP2-212ENST00000480112 RTF1Q92541 710 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP2-212ENST00000480112 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP2-212ENST00000480112 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP2-212ENST00000480112 A0A0G2JS52 829 aa16.04■□□□□ 0.16
CDK5RAP2-212ENST00000480112 HMMRO75330 724 aa16.04■□□□□ 0.16
CDK5RAP2-212ENST00000480112 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP2-212ENST00000480112 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
CDK5RAP2-212ENST00000480112 NLRP13Q86W25 1043 aa16.04■□□□□ 0.16
CDK5RAP2-212ENST00000480112 HSP90AA2PQ14568 343 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP2-212ENST00000480112 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
CDK5RAP2-212ENST00000480112 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP2-212ENST00000480112 GPATCH3Q96I76 525 aa16.02■□□□□ 0.16
CDK5RAP2-212ENST00000480112 KIF15Q9NS87 1388 aa16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 SOGA1O94964 1423 aa16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 CUX2O14529 1486 aa16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 ST18O60284 1047 aa16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
CDK5RAP2-212ENST00000480112 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
CDK5RAP2-212ENST00000480112 PKD2Q13563 968 aa15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 GSE1Q14687 1217 aa15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 SRPK2P78362 688 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 MPHOSPH9Q99550 1183 aa15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 KIF3AQ9Y496 699 aa15.99■□□□□ 0.15
CDK5RAP2-212ENST00000480112 LMOD3Q0VAK6 560 aa15.98■□□□□ 0.15
CDK5RAP2-212ENST00000480112 MYBBP1AQ9BQG0 1328 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP2-212ENST00000480112 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP2-212ENST00000480112 ZBED9Q6R2W3 1325 aa15.95■□□□□ 0.14
CDK5RAP2-212ENST00000480112 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
CDK5RAP2-212ENST00000480112 ATP6V1DQ9Y5K8 247 aa15.95■□□□□ 0.14
CDK5RAP2-212ENST00000480112 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP2-212ENST00000480112 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■■□□□ 12.7
CDK5RAP2-212ENST00000480112 SMC4Q9NTJ3 1288 aa15.94■□□□□ 0.14
CDK5RAP2-212ENST00000480112 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP2-212ENST00000480112 NOC3LQ8WTT2 800 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP2-212ENST00000480112 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
CDK5RAP2-212ENST00000480112 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP2-212ENST00000480112 PDE4AP27815 886 aa15.92■□□□□ 0.14
CDK5RAP2-212ENST00000480112 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
CDK5RAP2-212ENST00000480112 SETQ01105 290 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP2-212ENST00000480112 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
CDK5RAP2-212ENST00000480112 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
CDK5RAP2-212ENST00000480112 RSPH4AQ5TD94 716 aa15.9■□□□□ 0.14
CDK5RAP2-212ENST00000480112 TPM3P06753 285 aa15.89■□□□□ 0.13
CDK5RAP2-212ENST00000480112 GPS2Q13227 327 aa15.89■□□□□ 0.13
CDK5RAP2-212ENST00000480112 NUP155O75694 1391 aa15.89■□□□□ 0.13
CDK5RAP2-212ENST00000480112 AAMPQ13685 434 aa15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 NPHP1O15259 732 aa15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 TERF2IPQ9NYB0 399 aa15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 TAOK2Q9UL54 1235 aa15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP2-212ENST00000480112 E9PSI1 815 aa15.86■□□□□ 0.13
CDK5RAP2-212ENST00000480112 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP2-212ENST00000480112 HSP90B1P14625 803 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP2-212ENST00000480112 DHX57Q6P158 1386 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP2-212ENST00000480112 DDX49Q9Y6V7 483 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP2-212ENST00000480112 TRIM6-TRIM34B2RNG4 842 aa15.84■□□□□ 0.13
CDK5RAP2-212ENST00000480112 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP2-212ENST00000480112 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
CDK5RAP2-212ENST00000480112 APBB1O00213 710 aa15.84■□□□□ 0.13
CDK5RAP2-212ENST00000480112 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms