RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 YEATS2Q9ULM3 1422 aa22■■□□□ 1.11
ABCF1-206ENST00000479542 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
ABCF1-206ENST00000479542 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
ABCF1-206ENST00000479542 ATP10AO60312 1499 aa21.96■■□□□ 1.11
ABCF1-206ENST00000479542 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
ABCF1-206ENST00000479542 MYO5CQ9NQX4 1742 aa21.93■■□□□ 1.1
ABCF1-206ENST00000479542 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
ABCF1-206ENST00000479542 CLIP1P30622 1438 aa21.92■■□□□ 1.1
ABCF1-206ENST00000479542 C9orf84Q5VXU9 1444 aa21.92■■□□□ 1.1
ABCF1-206ENST00000479542 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
ABCF1-206ENST00000479542 SIGLEC1Q9BZZ2 1709 aa21.91■■□□□ 1.1
ABCF1-206ENST00000479542 KIF14Q15058 1648 aa21.91■■□□□ 1.1
ABCF1-206ENST00000479542 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
ABCF1-206ENST00000479542 KDM5CP41229 1560 aa21.88■■□□□ 1.09
ABCF1-206ENST00000479542 CASKIN1Q8WXD9 1431 aa21.85■■□□□ 1.09
ABCF1-206ENST00000479542 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
ABCF1-206ENST00000479542 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
ABCF1-206ENST00000479542 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
ABCF1-206ENST00000479542 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
ABCF1-206ENST00000479542 MLH3Q9UHC1 1453 aa21.83■■□□□ 1.09
ABCF1-206ENST00000479542 ARHGAP5Q13017 1502 aa21.83■■□□□ 1.09
ABCF1-206ENST00000479542 MLECQ14165 292 aa21.82■■□□□ 1.08
ABCF1-206ENST00000479542 HSPA2P54652 639 aa21.81■■□□□ 1.08
ABCF1-206ENST00000479542 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
ABCF1-206ENST00000479542 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
ABCF1-206ENST00000479542 SETD1BQ9UPS6 1966 aaKnown RBP21.79■■□□□ 1.08
ABCF1-206ENST00000479542 CDC42BPBQ9Y5S2 1711 aa21.77■■□□□ 1.08
ABCF1-206ENST00000479542 AGLP35573 1532 aa21.77■■□□□ 1.08
ABCF1-206ENST00000479542 DMRT2Q9Y5R5 561 aa21.75■■□□□ 1.07
ABCF1-206ENST00000479542 PREX2Q70Z35 1606 aa21.75■■□□□ 1.07
ABCF1-206ENST00000479542 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
ABCF1-206ENST00000479542 PREX1Q8TCU6 1659 aa21.74■■□□□ 1.07
ABCF1-206ENST00000479542 ABCC1P33527 1531 aa21.73■■□□□ 1.07
ABCF1-206ENST00000479542 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
ABCF1-206ENST00000479542 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
ABCF1-206ENST00000479542 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
ABCF1-206ENST00000479542 CERKQ8TCT0 537 aa21.71■■□□□ 1.07
ABCF1-206ENST00000479542 CEBPAP49715 358 aaPredicted RBP21.7■■□□□ 1.06
ABCF1-206ENST00000479542 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
ABCF1-206ENST00000479542 UHRF1BP1Q6BDS2 1440 aa21.69■■□□□ 1.06
ABCF1-206ENST00000479542 ABCA6Q8N139 1617 aa21.67■■□□□ 1.06
ABCF1-206ENST00000479542 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
ABCF1-206ENST00000479542 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
ABCF1-206ENST00000479542 CDC42BPAQ5VT25 1732 aa21.65■■□□□ 1.06
ABCF1-206ENST00000479542 KIAA1107Q9UPP5 1409 aa21.64■■□□□ 1.06
ABCF1-206ENST00000479542 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.06
ABCF1-206ENST00000479542 ESF1Q9H501 851 aaKnown RBP21.64■■□□□ 1.05
ABCF1-206ENST00000479542 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
ABCF1-206ENST00000479542 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
ABCF1-206ENST00000479542 PTPRTO14522 1441 aa21.61■■□□□ 1.05
ABCF1-206ENST00000479542 STRCQ7RTU9 1775 aa21.61■■□□□ 1.05
ABCF1-206ENST00000479542 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
ABCF1-206ENST00000479542 C3P01024 1663 aa21.6■■□□□ 1.05
ABCF1-206ENST00000479542 NPATQ14207 1427 aa21.58■■□□□ 1.05
ABCF1-206ENST00000479542 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
ABCF1-206ENST00000479542 PPP6R1Q9UPN7 881 aa21.57■■□□□ 1.04
ABCF1-206ENST00000479542 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
ABCF1-206ENST00000479542 MROH2AA6NES4 1674 aa21.54■■□□□ 1.04
ABCF1-206ENST00000479542 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.04
ABCF1-206ENST00000479542 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
ABCF1-206ENST00000479542 ZMYM3Q14202 1370 aa21.53■■□□□ 1.04
ABCF1-206ENST00000479542 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
ABCF1-206ENST00000479542 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
ABCF1-206ENST00000479542 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
ABCF1-206ENST00000479542 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
ABCF1-206ENST00000479542 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
ABCF1-206ENST00000479542 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
ABCF1-206ENST00000479542 A2MP01023 1474 aa21.48■■□□□ 1.03
ABCF1-206ENST00000479542 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
ABCF1-206ENST00000479542 IQSEC2Q5JU85 1478 aa21.47■■□□□ 1.03
ABCF1-206ENST00000479542 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
ABCF1-206ENST00000479542 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
ABCF1-206ENST00000479542 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
ABCF1-206ENST00000479542 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
ABCF1-206ENST00000479542 LTBP4Q8N2S1 1624 aa21.42■■□□□ 1.02
ABCF1-206ENST00000479542 SUPT6HQ7KZ85 1726 aaKnown RBP21.41■■□□□ 1.02
ABCF1-206ENST00000479542 EHBP1L1Q8N3D4 1523 aa21.41■■□□□ 1.02
ABCF1-206ENST00000479542 PKD2Q13563 968 aa21.41■■□□□ 1.02
ABCF1-206ENST00000479542 PLA2R1Q13018 1463 aa21.4■■□□□ 1.02
ABCF1-206ENST00000479542 PTPRKQ15262 1439 aa21.4■■□□□ 1.02
ABCF1-206ENST00000479542 ADGBQ8N7X0 1667 aa21.4■■□□□ 1.02
ABCF1-206ENST00000479542 TIAM1Q13009 1591 aa21.4■■□□□ 1.02
ABCF1-206ENST00000479542 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
ABCF1-206ENST00000479542 CAMSAP1Q5T5Y3 1602 aa21.38■■□□□ 1.01
ABCF1-206ENST00000479542 GGT6Q6P531 493 aa21.37■■□□□ 1.01
ABCF1-206ENST00000479542 ZNF644Q9H582 1327 aaPredicted RBP21.36■■□□□ 1.01
ABCF1-206ENST00000479542 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
ABCF1-206ENST00000479542 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
ABCF1-206ENST00000479542 CLTCQ00610 1675 aaKnown RBP21.35■■□□□ 1.01
ABCF1-206ENST00000479542 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
ABCF1-206ENST00000479542 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
ABCF1-206ENST00000479542 MYO3AQ8NEV4 1616 aa21.3■■□□□ 1
ABCF1-206ENST00000479542 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
ABCF1-206ENST00000479542 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
ABCF1-206ENST00000479542 A2ML1A8K2U0 1454 aa21.28■■□□□ 1
ABCF1-206ENST00000479542 NCOA2Q15596 1464 aa21.27■■□□□ 1
ABCF1-206ENST00000479542 KIF3BO15066 747 aa21.25■□□□□ 0.99
ABCF1-206ENST00000479542 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
ABCF1-206ENST00000479542 ZNF335Q9H4Z2 1342 aaPredicted RBP21.24■□□□□ 0.99
ABCF1-206ENST00000479542 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms