RNA–Protein interactions for RNA: ENST00000479155.1

LLGL1-202, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

TSL 1 (best)

Gene LLGL1, Length 6,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-202ENST00000479155 GOLGA6L4A6NEF3 574 aa18.46■□□□□ 0.54
LLGL1-202ENST00000479155 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
LLGL1-202ENST00000479155 HDGFL2Q7Z4V5 671 aaPredicted RBP18.44■□□□□ 0.54
LLGL1-202ENST00000479155 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
LLGL1-202ENST00000479155 STK26Q9P289 416 aa18.43■□□□□ 0.54
LLGL1-202ENST00000479155 NRDCO43847 1150 aa18.43■□□□□ 0.54
LLGL1-202ENST00000479155 HSPA5P11021 654 aaKnown RBP18.43■□□□□ 0.54
LLGL1-202ENST00000479155 GGT6Q6P531 493 aa18.43■□□□□ 0.54
LLGL1-202ENST00000479155 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
LLGL1-202ENST00000479155 PKD2Q13563 968 aa18.41■□□□□ 0.54
LLGL1-202ENST00000479155 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
LLGL1-202ENST00000479155 CCER2I3L3R5 266 aa18.39■□□□□ 0.54
LLGL1-202ENST00000479155 SOGA1O94964 1423 aa18.39■□□□□ 0.53
LLGL1-202ENST00000479155 CLSTN1O94985 981 aa18.39■□□□□ 0.53
LLGL1-202ENST00000479155 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
LLGL1-202ENST00000479155 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
LLGL1-202ENST00000479155 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
LLGL1-202ENST00000479155 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
LLGL1-202ENST00000479155 CARMIL2Q6F5E8 1435 aa18.36■□□□□ 0.53
LLGL1-202ENST00000479155 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
LLGL1-202ENST00000479155 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
LLGL1-202ENST00000479155 FOXD1Q16676 465 aa18.35■□□□□ 0.53
LLGL1-202ENST00000479155 APBB1O00213 710 aa18.35■□□□□ 0.53
LLGL1-202ENST00000479155 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.53
LLGL1-202ENST00000479155 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
LLGL1-202ENST00000479155 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
LLGL1-202ENST00000479155 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
LLGL1-202ENST00000479155 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
LLGL1-202ENST00000479155 VPS8Q8N3P4 1428 aa18.31■□□□□ 0.52
LLGL1-202ENST00000479155 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
LLGL1-202ENST00000479155 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
LLGL1-202ENST00000479155 KIAA1211Q6ZU35 1233 aa18.31■□□□□ 0.52
LLGL1-202ENST00000479155 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
LLGL1-202ENST00000479155 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
LLGL1-202ENST00000479155 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
LLGL1-202ENST00000479155 ZNF330Q9Y3S2 320 aaPredicted RBP18.3■□□□□ 0.52
LLGL1-202ENST00000479155 EIF3AQ14152 1382 aaKnown RBP18.28■□□□□ 0.52
LLGL1-202ENST00000479155 MSNP26038 577 aaKnown RBP18.28■□□□□ 0.52
LLGL1-202ENST00000479155 RALBP1Q15311 655 aa18.28■□□□□ 0.52
LLGL1-202ENST00000479155 NUP155O75694 1391 aa18.28■□□□□ 0.52
LLGL1-202ENST00000479155 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.51
LLGL1-202ENST00000479155 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
LLGL1-202ENST00000479155 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
LLGL1-202ENST00000479155 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
LLGL1-202ENST00000479155 RCAN3Q9UKA8 241 aa18.26■□□□□ 0.51
LLGL1-202ENST00000479155 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
LLGL1-202ENST00000479155 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
LLGL1-202ENST00000479155 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
LLGL1-202ENST00000479155 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
LLGL1-202ENST00000479155 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
LLGL1-202ENST00000479155 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
LLGL1-202ENST00000479155 STK31Q9BXU1 1019 aa18.21■□□□□ 0.51
LLGL1-202ENST00000479155 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
LLGL1-202ENST00000479155 PTMSP20962 102 aa18.2■□□□□ 0.5
LLGL1-202ENST00000479155 GBP4Q96PP9 640 aa18.2■□□□□ 0.5
LLGL1-202ENST00000479155 CHMP4AQ9BY43 222 aa18.19■□□□□ 0.5
LLGL1-202ENST00000479155 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
LLGL1-202ENST00000479155 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
LLGL1-202ENST00000479155 CHMP3Q9Y3E7 222 aa18.18■□□□□ 0.5
LLGL1-202ENST00000479155 CCDC9Q9Y3X0 531 aaKnown RBP18.17■□□□□ 0.5
LLGL1-202ENST00000479155 KIF3BO15066 747 aa18.17■□□□□ 0.5
LLGL1-202ENST00000479155 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
LLGL1-202ENST00000479155 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
LLGL1-202ENST00000479155 GORABQ5T7V8 394 aa18.17■□□□□ 0.5
LLGL1-202ENST00000479155 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
LLGL1-202ENST00000479155 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
LLGL1-202ENST00000479155 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
LLGL1-202ENST00000479155 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
LLGL1-202ENST00000479155 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
LLGL1-202ENST00000479155 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
LLGL1-202ENST00000479155 TAF7LQ5H9L4 462 aa18.15■□□□□ 0.5
LLGL1-202ENST00000479155 KIAA2012Q0VF49 1180 aa18.14■□□□□ 0.49
LLGL1-202ENST00000479155 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
LLGL1-202ENST00000479155 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
LLGL1-202ENST00000479155 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
LLGL1-202ENST00000479155 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
LLGL1-202ENST00000479155 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
LLGL1-202ENST00000479155 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
LLGL1-202ENST00000479155 HMMRO75330 724 aa18.13■□□□□ 0.49
LLGL1-202ENST00000479155 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
LLGL1-202ENST00000479155 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
LLGL1-202ENST00000479155 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
LLGL1-202ENST00000479155 SLKQ9H2G2 1235 aaPredicted RBP18.12■□□□□ 0.49
LLGL1-202ENST00000479155 HDAC5Q9UQL6 1122 aa18.11■□□□□ 0.49
LLGL1-202ENST00000479155 NGDNQ8NEJ9 315 aaKnown RBP18.11■□□□□ 0.49
LLGL1-202ENST00000479155 SYAP1Q96A49 352 aaPredicted RBP18.1■□□□□ 0.49
LLGL1-202ENST00000479155 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
LLGL1-202ENST00000479155 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
LLGL1-202ENST00000479155 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
LLGL1-202ENST00000479155 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
LLGL1-202ENST00000479155 GZF1Q9H116 711 aaPredicted RBP18.09■□□□□ 0.49
LLGL1-202ENST00000479155 AMPHP49418 695 aa18.08■□□□□ 0.48
LLGL1-202ENST00000479155 TPM4P67936 248 aa18.08■□□□□ 0.48
LLGL1-202ENST00000479155 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
LLGL1-202ENST00000479155 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
LLGL1-202ENST00000479155 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
LLGL1-202ENST00000479155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.06■□□□□ 0.48
LLGL1-202ENST00000479155 CLUAP1Q96AJ1 413 aa18.06■□□□□ 0.48
LLGL1-202ENST00000479155 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
LLGL1-202ENST00000479155 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms