RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 TK2O00142 265 aa5.38□□□□□ -1.55
SRRM1-211ENST00000478890 HRO43593 1189 aa5.37□□□□□ -1.55
SRRM1-211ENST00000478890 GFRA3O60609 400 aa5.36□□□□□ -1.55
SRRM1-211ENST00000478890 PTPN5P54829 565 aa5.36□□□□□ -1.55
SRRM1-211ENST00000478890 STAC3Q96MF2 364 aa5.35□□□□□ -1.55
SRRM1-211ENST00000478890 ARHGAP33O14559 1287 aa5.34□□□□□ -1.55
SRRM1-211ENST00000478890 PYGBP11216 843 aa5.34□□□□□ -1.55
SRRM1-211ENST00000478890 CSRNP3Q8WYN3 585 aa5.34□□□□□ -1.55
SRRM1-211ENST00000478890 STK17AQ9UEE5 414 aa5.33□□□□□ -1.56
SRRM1-211ENST00000478890 ZNF467Q7Z7K2 595 aaPredicted RBP5.32□□□□□ -1.56
SRRM1-211ENST00000478890 NRG2O14511 850 aaPredicted RBP5.31□□□□□ -1.56
SRRM1-211ENST00000478890 KHSRPQ92945 711 aaKnown RBP eCLIP5.31□□□□□ -1.562e-12■■□□□ 13.6
SRRM1-211ENST00000478890 PROM2Q8N271 834 aa5.29□□□□□ -1.56
SRRM1-211ENST00000478890 PLCD3Q8N3E9 789 aa5.29□□□□□ -1.56
SRRM1-211ENST00000478890 TMEM92Q6UXU6 159 aa5.28□□□□□ -1.56
SRRM1-211ENST00000478890 SUZ12Q15022 739 aaKnown RBP5.27□□□□□ -1.57
SRRM1-211ENST00000478890 PSEN1P49768 467 aa5.25□□□□□ -1.57
SRRM1-211ENST00000478890 TREML4Q6UXN2 200 aa5.25□□□□□ -1.57
SRRM1-211ENST00000478890 LHX6Q9UPM6 363 aa5.25□□□□□ -1.57
SRRM1-211ENST00000478890 ITGBL1O95965 494 aaPredicted RBP5.24□□□□□ -1.57
SRRM1-211ENST00000478890 PSDA5PKW4 1024 aaPredicted RBP5.23□□□□□ -1.57
SRRM1-211ENST00000478890 NUDT7P0C024 238 aa5.23□□□□□ -1.57
SRRM1-211ENST00000478890 THSD4Q6ZMP0 1018 aa5.23□□□□□ -1.57
SRRM1-211ENST00000478890 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
SRRM1-211ENST00000478890 DMRTA1Q5VZB9 504 aa5.22□□□□□ -1.57
SRRM1-211ENST00000478890 MICALL2Q8IY33 904 aa5.21□□□□□ -1.58
SRRM1-211ENST00000478890 CABP2Q9NPB3 220 aa5.19□□□□□ -1.58
SRRM1-211ENST00000478890 PSEN2P49810 448 aa5.18□□□□□ -1.58
SRRM1-211ENST00000478890 INSM1Q01101 510 aaPredicted RBP5.18□□□□□ -1.58
SRRM1-211ENST00000478890 PDAP1Q13442 181 aaKnown RBP5.15□□□□□ -1.59
SRRM1-211ENST00000478890 WNT2BQ93097 391 aa5.14□□□□□ -1.59
SRRM1-211ENST00000478890 GOLGA8CPA6NN73 597 aa5.13□□□□□ -1.59
SRRM1-211ENST00000478890 KCNH8Q96L42 1107 aa5.12□□□□□ -1.59
SRRM1-211ENST00000478890 WIPF1O43516 503 aa5.11□□□□□ -1.59
SRRM1-211ENST00000478890 VPS9D1Q9Y2B5 631 aa5.11□□□□□ -1.59
SRRM1-211ENST00000478890 PCDHGA4Q9Y5G9 962 aa5.11□□□□□ -1.59
SRRM1-211ENST00000478890 CHRM1P11229 460 aaPredicted RBP5.1□□□□□ -1.59
SRRM1-211ENST00000478890 KCNC4Q03721 635 aa5.1□□□□□ -1.59
SRRM1-211ENST00000478890 PRKD2Q9BZL6 878 aa5.09□□□□□ -1.59
SRRM1-211ENST00000478890 SLC34A2O95436 690 aa5.08□□□□□ -1.6
SRRM1-211ENST00000478890 PDZRN3Q9UPQ7 1066 aa5.08□□□□□ -1.6
SRRM1-211ENST00000478890 WFS1O76024 890 aa5.07□□□□□ -1.6
SRRM1-211ENST00000478890 V9GY48 417 aaPredicted RBP5.07□□□□□ -1.6
SRRM1-211ENST00000478890 FAM181BA6NEQ2 426 aa5.06□□□□□ -1.6
SRRM1-211ENST00000478890 BHMG1C9JSJ3 638 aaPredicted RBP5.06□□□□□ -1.6
SRRM1-211ENST00000478890 GSE1Q14687 1217 aa5.06□□□□□ -1.6
SRRM1-211ENST00000478890 POTECB2RU33 542 aa5.05□□□□□ -1.6
SRRM1-211ENST00000478890 PPP4R3BQ5MIZ7 849 aa5.05□□□□□ -1.6
SRRM1-211ENST00000478890 NYAP1Q6ZVC0 841 aa5.05□□□□□ -1.6
SRRM1-211ENST00000478890 MRPL50Q8N5N7 158 aaKnown RBP5.05□□□□□ -1.6
SRRM1-211ENST00000478890 KCNK17Q96T54 332 aa5.05□□□□□ -1.6
SRRM1-211ENST00000478890 SLC4A5Q9BY07 1137 aa5.05□□□□□ -1.6
SRRM1-211ENST00000478890 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
SRRM1-211ENST00000478890 EFCAB3Q8N7B9 438 aa5.01□□□□□ -1.61
SRRM1-211ENST00000478890 MYT1Q01538 1121 aa5□□□□□ -1.61
SRRM1-211ENST00000478890 NBPF3Q9H094 633 aa4.99□□□□□ -1.61
SRRM1-211ENST00000478890 PKDCCQ504Y2 493 aa4.98□□□□□ -1.61
SRRM1-211ENST00000478890 KDM4FA0A1W2PPD8 638 aa4.97□□□□□ -1.61
SRRM1-211ENST00000478890 KIF3CO14782 793 aa4.97□□□□□ -1.61
SRRM1-211ENST00000478890 DGAT1O75907 488 aa4.97□□□□□ -1.61
SRRM1-211ENST00000478890 ANKK1Q8NFD2 765 aa4.97□□□□□ -1.61
SRRM1-211ENST00000478890 ANO8Q9HCE9 1232 aaPredicted RBP4.97□□□□□ -1.61
SRRM1-211ENST00000478890 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
SRRM1-211ENST00000478890 XP32Q5T750 250 aa4.96□□□□□ -1.62
SRRM1-211ENST00000478890 NFX1Q12986 1120 aaKnown RBP4.95□□□□□ -1.62
SRRM1-211ENST00000478890 SOX12O15370 315 aa4.94□□□□□ -1.62
SRRM1-211ENST00000478890 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
SRRM1-211ENST00000478890 C2orf72A6NCS6 295 aa4.93□□□□□ -1.62
SRRM1-211ENST00000478890 FKBP8Q14318 412 aa4.93□□□□□ -1.62
SRRM1-211ENST00000478890 KRTAP1-3Q8IUG1 177 aa4.93□□□□□ -1.62
SRRM1-211ENST00000478890 MS4A4AQ96JQ5 239 aa4.93□□□□□ -1.62
SRRM1-211ENST00000478890 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SRRM1-211ENST00000478890 SOWAHBA6NEL2 793 aa4.9□□□□□ -1.63
SRRM1-211ENST00000478890 BCAMP50895 628 aa4.9□□□□□ -1.63
SRRM1-211ENST00000478890 ZBED2Q9BTP6 218 aa4.9□□□□□ -1.63
SRRM1-211ENST00000478890 PSMG3-AS1Q96PY0 264 aa4.89□□□□□ -1.63
SRRM1-211ENST00000478890 BCL2L12Q9HB09 334 aa4.89□□□□□ -1.63
SRRM1-211ENST00000478890 WBP1LQ9NX94 342 aa4.88□□□□□ -1.63
SRRM1-211ENST00000478890 PPP1R18Q6NYC8 613 aa4.87□□□□□ -1.63
SRRM1-211ENST00000478890 PTCD2Q8WV60 388 aaKnown RBP4.87□□□□□ -1.63
SRRM1-211ENST00000478890 PTPREP23469 700 aa4.86□□□□□ -1.63
SRRM1-211ENST00000478890 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.85□□□□□ -1.63
SRRM1-211ENST00000478890 TRIM67Q6ZTA4 783 aa4.84□□□□□ -1.63
SRRM1-211ENST00000478890 KCTD17Q8N5Z5 321 aa4.84□□□□□ -1.63
SRRM1-211ENST00000478890 ZSCAN1Q8NBB4 408 aa4.84□□□□□ -1.63
SRRM1-211ENST00000478890 PHF8Q9UPP1 1060 aa4.84□□□□□ -1.63
SRRM1-211ENST00000478890 AAASQ9NRG9 546 aa4.83□□□□□ -1.64
SRRM1-211ENST00000478890 FAM187AA6NFU0 413 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 PRR20EP86478 221 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 PRR20CP86479 221 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 PRR20DP86480 221 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 PRR20BP86481 221 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 PRR20AP86496 221 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 LAPTM4BQ86VI4 370 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 TMC2Q8TDI7 906 aa4.82□□□□□ -1.64
SRRM1-211ENST00000478890 C11orf95C9JLR9 678 aaPredicted RBP4.81□□□□□ -1.64
SRRM1-211ENST00000478890 ST8SIA5O15466 376 aa4.81□□□□□ -1.64
SRRM1-211ENST00000478890 TBC1D12O60347 775 aa4.81□□□□□ -1.64
SRRM1-211ENST00000478890 TERTO14746 1132 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms