RNA–Protein interactions for RNA: ENST00000478535.1

MBNL1-216, Transcript of muscleblind like splicing regulator 1, human

TSL 1 (best)

Gene MBNL1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBNL1-216	ENST00000478535	KIF14	Q15058	1648 aa		11.68	□□□□□ -0.54
MBNL1-216	ENST00000478535	PLEKHD1	A6NEE1	506 aa		11.68	□□□□□ -0.54
MBNL1-216	ENST00000478535	FANCA	O15360	1455 aa		11.67	□□□□□ -0.54
MBNL1-216	ENST00000478535	FMN1	Q68DA7	1419 aa		11.67	□□□□□ -0.54
MBNL1-216	ENST00000478535	PHLDB1	Q86UU1	1377 aa		11.67	□□□□□ -0.54
MBNL1-216	ENST00000478535	ADAMTSL3	P82987	1691 aa		11.67	□□□□□ -0.54
MBNL1-216	ENST00000478535	PCF11	O94913	1555 aa	Known RBP	11.67	□□□□□ -0.54
MBNL1-216	ENST00000478535	RAPGEF3	O95398	923 aa		11.66	□□□□□ -0.54
MBNL1-216	ENST00000478535	RIMS1	Q86UR5	1692 aa	Known RBP	11.66	□□□□□ -0.54
MBNL1-216	ENST00000478535	MADD	Q8WXG6	1647 aa		11.66	□□□□□ -0.54
MBNL1-216	ENST00000478535	AKNA	Q7Z591	1439 aa		11.64	□□□□□ -0.55
MBNL1-216	ENST00000478535	FER1L4	A9Z1Z3	1794 aa		11.64	□□□□□ -0.55
MBNL1-216	ENST00000478535	CNKSR2	Q8WXI2	1034 aa		11.63	□□□□□ -0.55
MBNL1-216	ENST00000478535	SIGLEC1	Q9BZZ2	1709 aa		11.63	□□□□□ -0.55
MBNL1-216	ENST00000478535	DENND4B	O75064	1496 aa	Predicted RBP	11.63	□□□□□ -0.55
MBNL1-216	ENST00000478535	CDC42BPB	Q9Y5S2	1711 aa		11.63	□□□□□ -0.55
MBNL1-216	ENST00000478535	ZMYM4	Q5VZL5	1548 aa		11.62	□□□□□ -0.55
MBNL1-216	ENST00000478535	ZFYVE16	Q7Z3T8	1539 aa		11.61	□□□□□ -0.55
MBNL1-216	ENST00000478535	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.6	□□□□□ -0.55
MBNL1-216	ENST00000478535	CDC42BPA	Q5VT25	1732 aa		11.6	□□□□□ -0.55
MBNL1-216	ENST00000478535	ARHGAP5	Q13017	1502 aa		11.6	□□□□□ -0.55
MBNL1-216	ENST00000478535	PREX2	Q70Z35	1606 aa		11.6	□□□□□ -0.55
MBNL1-216	ENST00000478535	CLIP1	P30622	1438 aa		11.59	□□□□□ -0.55
MBNL1-216	ENST00000478535	NCBP3	Q53F19	620 aa	Known RBP	11.58	□□□□□ -0.56
MBNL1-216	ENST00000478535	ITSN2	Q9NZM3	1697 aa		11.58	□□□□□ -0.56
MBNL1-216	ENST00000478535	PTPRM	P28827	1452 aa		11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	CCDC18	Q5T9S5	1454 aa		11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	PLCH2	O75038	1416 aa		11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	TRO	Q12816	1431 aa	Predicted RBP	11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	POGZ	Q7Z3K3	1410 aa		11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.57	□□□□□ -0.56
MBNL1-216	ENST00000478535	SCAPER	Q9BY12	1400 aa		11.55	□□□□□ -0.56
MBNL1-216	ENST00000478535	YEATS2	Q9ULM3	1422 aa		11.55	□□□□□ -0.56
MBNL1-216	ENST00000478535	CASKIN1	Q8WXD9	1431 aa		11.55	□□□□□ -0.56
MBNL1-216	ENST00000478535	FYCO1	Q9BQS8	1478 aa		11.54	□□□□□ -0.56
MBNL1-216	ENST00000478535	MAGI2	Q86UL8	1455 aa		11.53	□□□□□ -0.56
MBNL1-216	ENST00000478535	ABCA6	Q8N139	1617 aa		11.52	□□□□□ -0.56
MBNL1-216	ENST00000478535	ZNF518A	Q6AHZ1	1483 aa		11.52	□□□□□ -0.56
MBNL1-216	ENST00000478535	KDM5C	P41229	1560 aa		11.52	□□□□□ -0.57
MBNL1-216	ENST00000478535	EFCAB2	Q5VUJ9	269 aa		11.51	□□□□□ -0.57
MBNL1-216	ENST00000478535	ABCC1	P33527	1531 aa		11.51	□□□□□ -0.57
MBNL1-216	ENST00000478535	DIP2C	Q9Y2E4	1556 aa		11.5	□□□□□ -0.57
MBNL1-216	ENST00000478535	C9orf84	Q5VXU9	1444 aa		11.5	□□□□□ -0.57
MBNL1-216	ENST00000478535	MLEC	Q14165	292 aa		11.5	□□□□□ -0.57
MBNL1-216	ENST00000478535	RNF216	Q9NWF9	866 aa	Predicted RBP	11.5	□□□□□ -0.57
MBNL1-216	ENST00000478535	MYT1L	Q9UL68	1186 aa		11.5	□□□□□ -0.57
MBNL1-216	ENST00000478535	PREX1	Q8TCU6	1659 aa		11.49	□□□□□ -0.57
MBNL1-216	ENST00000478535	KIDINS220	Q9ULH0	1771 aa		11.49	□□□□□ -0.57
MBNL1-216	ENST00000478535	ATP10A	O60312	1499 aa		11.48	□□□□□ -0.57
MBNL1-216	ENST00000478535	SAMD9L	Q8IVG5	1584 aa		11.48	□□□□□ -0.57
MBNL1-216	ENST00000478535	LMTK3	Q96Q04	1460 aa		11.47	□□□□□ -0.57
MBNL1-216	ENST00000478535	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.47	□□□□□ -0.57
MBNL1-216	ENST00000478535	SYCP2	Q9BX26	1530 aa		11.46	□□□□□ -0.57
MBNL1-216	ENST00000478535	ARHGEF12	Q9NZN5	1544 aa		11.46	□□□□□ -0.57
MBNL1-216	ENST00000478535	C3	P01024	1663 aa		11.46	□□□□□ -0.58
MBNL1-216	ENST00000478535	RERE	Q9P2R6	1566 aa		11.45	□□□□□ -0.58
MBNL1-216	ENST00000478535	ILDR1	Q86SU0	546 aa	Predicted RBP	11.44	□□□□□ -0.58
MBNL1-216	ENST00000478535	AFAP1	Q8N556	730 aa		11.44	□□□□□ -0.58
MBNL1-216	ENST00000478535	TRAPPC8	Q9Y2L5	1435 aa		11.43	□□□□□ -0.58
MBNL1-216	ENST00000478535	SETD1B	Q9UPS6	1966 aa	Known RBP	11.43	□□□□□ -0.58
MBNL1-216	ENST00000478535	EHBP1L1	Q8N3D4	1523 aa		11.43	□□□□□ -0.58
MBNL1-216	ENST00000478535	CEP162	Q5TB80	1403 aa		11.42	□□□□□ -0.58
MBNL1-216	ENST00000478535	TIAM1	Q13009	1591 aa		11.42	□□□□□ -0.58
MBNL1-216	ENST00000478535	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.42	□□□□□ -0.58
MBNL1-216	ENST00000478535	MTUS2	Q5JR59	1369 aa		11.41	□□□□□ -0.58
MBNL1-216	ENST00000478535	KCNA4	P22459	653 aa		11.41	□□□□□ -0.58
MBNL1-216	ENST00000478535	MLH3	Q9UHC1	1453 aa		11.41	□□□□□ -0.58
MBNL1-216	ENST00000478535	ADGB	Q8N7X0	1667 aa		11.41	□□□□□ -0.58
MBNL1-216	ENST00000478535	INO80	Q9ULG1	1556 aa	Predicted RBP	11.41	□□□□□ -0.58
MBNL1-216	ENST00000478535	ATP7A	Q04656	1500 aa		11.4	□□□□□ -0.58
MBNL1-216	ENST00000478535	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.4	□□□□□ -0.58
MBNL1-216	ENST00000478535	CLTC	Q00610	1675 aa	Known RBP	11.4	□□□□□ -0.59
MBNL1-216	ENST00000478535	MROH2A	A6NES4	1674 aa		11.39	□□□□□ -0.59
MBNL1-216	ENST00000478535	HSPA2	P54652	639 aa		11.38	□□□□□ -0.59
MBNL1-216	ENST00000478535	POTEH	Q6S545	545 aa		11.38	□□□□□ -0.59
MBNL1-216	ENST00000478535	CCNB3	Q8WWL7	1395 aa		11.38	□□□□□ -0.59
MBNL1-216	ENST00000478535	NPM3	O75607	178 aa	Known RBP	11.38	□□□□□ -0.59
MBNL1-216	ENST00000478535	AGL	P35573	1532 aa		11.38	□□□□□ -0.59
MBNL1-216	ENST00000478535	STRC	Q7RTU9	1775 aa		11.37	□□□□□ -0.59
MBNL1-216	ENST00000478535	PLEKHH2	Q8IVE3	1493 aa		11.36	□□□□□ -0.59
MBNL1-216	ENST00000478535	CEBPA	P49715	358 aa	Predicted RBP	11.36	□□□□□ -0.59
MBNL1-216	ENST00000478535	ESF1	Q9H501	851 aa	Known RBP	11.35	□□□□□ -0.59
MBNL1-216	ENST00000478535	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.35	□□□□□ -0.59
MBNL1-216	ENST00000478535	PLXNC1	O60486	1568 aa		11.34	□□□□□ -0.59
MBNL1-216	ENST00000478535	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
MBNL1-216	ENST00000478535	UHRF1BP1	Q6BDS2	1440 aa		11.34	□□□□□ -0.59
MBNL1-216	ENST00000478535	SPAG9	O60271	1321 aa	Known RBP	11.34	□□□□□ -0.59
MBNL1-216	ENST00000478535	KIAA1107	Q9UPP5	1409 aa		11.32	□□□□□ -0.6
MBNL1-216	ENST00000478535	MYO3A	Q8NEV4	1616 aa		11.31	□□□□□ -0.6
MBNL1-216	ENST00000478535	NCOA2	Q15596	1464 aa		11.31	□□□□□ -0.6
MBNL1-216	ENST00000478535	A2M	P01023	1474 aa		11.31	□□□□□ -0.6
MBNL1-216	ENST00000478535	CAMSAP2	Q08AD1	1489 aa		11.31	□□□□□ -0.6
MBNL1-216	ENST00000478535	ZNF142	P52746	1687 aa	Predicted RBP	11.3	□□□□□ -0.6
MBNL1-216	ENST00000478535	CNTLN	Q9NXG0	1405 aa		11.3	□□□□□ -0.6
MBNL1-216	ENST00000478535	VPS8	Q8N3P4	1428 aa		11.28	□□□□□ -0.6
MBNL1-216	ENST00000478535	FBXO41	Q8TF61	875 aa		11.28	□□□□□ -0.6
MBNL1-216	ENST00000478535	ZNF644	Q9H582	1327 aa	Predicted RBP	11.28	□□□□□ -0.6
MBNL1-216	ENST00000478535	CCDC141	Q6ZP82	1450 aa		11.28	□□□□□ -0.6
MBNL1-216	ENST00000478535	CFAP65	Q6ZU64	1925 aa	Known RBP	11.27	□□□□□ -0.6
MBNL1-216	ENST00000478535	LOC105371045	A0A1W2PR82	267 aa		11.27	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms