RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
TDP2-204ENST00000478507 KIF14Q15058 1648 aa21.3■■□□□ 1
TDP2-204ENST00000478507 FER1L4A9Z1Z3 1794 aa21.29■■□□□ 1
TDP2-204ENST00000478507 LRRIQ1Q96JM4 1722 aa21.28■■□□□ 1
TDP2-204ENST00000478507 ARHGEF12Q9NZN5 1544 aa21.28■■□□□ 1
TDP2-204ENST00000478507 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
TDP2-204ENST00000478507 ATP10AO60312 1499 aa21.26■□□□□ 0.99
TDP2-204ENST00000478507 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
TDP2-204ENST00000478507 KDM5CP41229 1560 aa21.25■□□□□ 0.99
TDP2-204ENST00000478507 EFCAB2Q5VUJ9 269 aa21.25■□□□□ 0.99
TDP2-204ENST00000478507 C9orf84Q5VXU9 1444 aa21.25■□□□□ 0.99
TDP2-204ENST00000478507 HSPA2P54652 639 aa21.24■□□□□ 0.99
TDP2-204ENST00000478507 ZNF518AQ6AHZ1 1483 aa21.23■□□□□ 0.99
TDP2-204ENST00000478507 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
TDP2-204ENST00000478507 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
TDP2-204ENST00000478507 MLECQ14165 292 aa21.2■□□□□ 0.98
TDP2-204ENST00000478507 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
TDP2-204ENST00000478507 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
TDP2-204ENST00000478507 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
TDP2-204ENST00000478507 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
TDP2-204ENST00000478507 CLIP1P30622 1438 aa21.18■□□□□ 0.98
TDP2-204ENST00000478507 REREQ9P2R6 1566 aa21.17■□□□□ 0.98
TDP2-204ENST00000478507 DIP2CQ9Y2E4 1556 aa21.17■□□□□ 0.98
TDP2-204ENST00000478507 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
TDP2-204ENST00000478507 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
TDP2-204ENST00000478507 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
TDP2-204ENST00000478507 PREX2Q70Z35 1606 aa21.14■□□□□ 0.97
TDP2-204ENST00000478507 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
TDP2-204ENST00000478507 ABCA6Q8N139 1617 aa21.13■□□□□ 0.97
TDP2-204ENST00000478507 ABCC1P33527 1531 aa21.12■□□□□ 0.97
TDP2-204ENST00000478507 CASKIN1Q8WXD9 1431 aa21.12■□□□□ 0.97
TDP2-204ENST00000478507 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
TDP2-204ENST00000478507 CEBPAP49715 358 aaPredicted RBP21.09■□□□□ 0.97
TDP2-204ENST00000478507 TRAPPC8Q9Y2L5 1435 aa21.09■□□□□ 0.97
TDP2-204ENST00000478507 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
TDP2-204ENST00000478507 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.97
TDP2-204ENST00000478507 AGLP35573 1532 aa21.08■□□□□ 0.96
TDP2-204ENST00000478507 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
TDP2-204ENST00000478507 CDC42BPAQ5VT25 1732 aa21.07■□□□□ 0.96
TDP2-204ENST00000478507 KIDINS220Q9ULH0 1771 aa21.05■□□□□ 0.96
TDP2-204ENST00000478507 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
TDP2-204ENST00000478507 C3P01024 1663 aa21.04■□□□□ 0.96
TDP2-204ENST00000478507 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
TDP2-204ENST00000478507 UHRF1BP1Q6BDS2 1440 aa21.02■□□□□ 0.96
TDP2-204ENST00000478507 SAMD9LQ8IVG5 1584 aa20.98■□□□□ 0.95
TDP2-204ENST00000478507 MYT1LQ9UL68 1186 aa20.97■□□□□ 0.95
TDP2-204ENST00000478507 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
TDP2-204ENST00000478507 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
TDP2-204ENST00000478507 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
TDP2-204ENST00000478507 SYCP2Q9BX26 1530 aa20.94■□□□□ 0.94
TDP2-204ENST00000478507 PTPRTO14522 1441 aa20.92■□□□□ 0.94
TDP2-204ENST00000478507 MROH2AA6NES4 1674 aa20.92■□□□□ 0.94
TDP2-204ENST00000478507 PLXNC1O60486 1568 aa20.89■□□□□ 0.94
TDP2-204ENST00000478507 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.94
TDP2-204ENST00000478507 KIAA1107Q9UPP5 1409 aa20.89■□□□□ 0.94
TDP2-204ENST00000478507 NPATQ14207 1427 aa20.88■□□□□ 0.93
TDP2-204ENST00000478507 ATP7AQ04656 1500 aa20.88■□□□□ 0.93
TDP2-204ENST00000478507 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
TDP2-204ENST00000478507 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
TDP2-204ENST00000478507 ZNF777Q9ULD5 760 aaPredicted RBP20.86■□□□□ 0.93
TDP2-204ENST00000478507 SUPT6HQ7KZ85 1726 aaKnown RBP20.86■□□□□ 0.93
TDP2-204ENST00000478507 LTBP4Q8N2S1 1624 aa20.86■□□□□ 0.93
TDP2-204ENST00000478507 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
TDP2-204ENST00000478507 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
TDP2-204ENST00000478507 PLEKHH2Q8IVE3 1493 aa20.85■□□□□ 0.93
TDP2-204ENST00000478507 ZMYM3Q14202 1370 aa20.83■□□□□ 0.92
TDP2-204ENST00000478507 A2MP01023 1474 aa20.81■□□□□ 0.92
TDP2-204ENST00000478507 CFDP1Q9UEE9 299 aaPredicted RBP20.81■□□□□ 0.92
TDP2-204ENST00000478507 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
TDP2-204ENST00000478507 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
TDP2-204ENST00000478507 CAMSAP1Q5T5Y3 1602 aa20.8■□□□□ 0.92
TDP2-204ENST00000478507 TIAM1Q13009 1591 aa20.8■□□□□ 0.92
TDP2-204ENST00000478507 ZNF142P52746 1687 aaPredicted RBP20.79■□□□□ 0.92
TDP2-204ENST00000478507 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
TDP2-204ENST00000478507 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
TDP2-204ENST00000478507 MTUS2Q5JR59 1369 aa20.77■□□□□ 0.92
TDP2-204ENST00000478507 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.92
TDP2-204ENST00000478507 ADGBQ8N7X0 1667 aa20.77■□□□□ 0.91
TDP2-204ENST00000478507 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
TDP2-204ENST00000478507 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
TDP2-204ENST00000478507 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
TDP2-204ENST00000478507 ZNF644Q9H582 1327 aaPredicted RBP20.74■□□□□ 0.91
TDP2-204ENST00000478507 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
TDP2-204ENST00000478507 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
TDP2-204ENST00000478507 RTEL1-TNFRSF6BF6WH68 1400 aa20.71■□□□□ 0.91
TDP2-204ENST00000478507 TCOF1Q13428 1488 aaKnown RBP20.71■□□□□ 0.91
TDP2-204ENST00000478507 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
TDP2-204ENST00000478507 GGT6Q6P531 493 aa20.68■□□□□ 0.9
TDP2-204ENST00000478507 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
TDP2-204ENST00000478507 DHX29Q7Z478 1369 aaKnown RBP20.66■□□□□ 0.9
TDP2-204ENST00000478507 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
TDP2-204ENST00000478507 ZNF335Q9H4Z2 1342 aaPredicted RBP20.65■□□□□ 0.9
TDP2-204ENST00000478507 PKD2Q13563 968 aa20.65■□□□□ 0.9
TDP2-204ENST00000478507 ILDR2Q71H61 639 aa20.64■□□□□ 0.89
TDP2-204ENST00000478507 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
TDP2-204ENST00000478507 DNMT1P26358 1616 aaKnown RBP20.63■□□□□ 0.89
TDP2-204ENST00000478507 FAM135AQ9P2D6 1515 aa20.62■□□□□ 0.89
TDP2-204ENST00000478507 NCOA2Q15596 1464 aa20.62■□□□□ 0.89
TDP2-204ENST00000478507 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
TDP2-204ENST00000478507 SPATA31D1Q6ZQQ2 1576 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms