RNA–Protein interactions for RNA: ENST00000478449.5

NCKAP1-205, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-205ENST00000478449 NACADO15069 1562 aa10.16□□□□□ -0.78
NCKAP1-205ENST00000478449 G3V3G9 751 aa10.15□□□□□ -0.78
NCKAP1-205ENST00000478449 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
NCKAP1-205ENST00000478449 FBXO22Q8NEZ5 403 aa10.13□□□□□ -0.79
NCKAP1-205ENST00000478449 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
NCKAP1-205ENST00000478449 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
NCKAP1-205ENST00000478449 MS4A4AQ96JQ5 239 aa10.09□□□□□ -0.79
NCKAP1-205ENST00000478449 POTEMA6NI47 508 aa10.08□□□□□ -0.8
NCKAP1-205ENST00000478449 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
NCKAP1-205ENST00000478449 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
NCKAP1-205ENST00000478449 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
NCKAP1-205ENST00000478449 SNPHO15079 494 aa10.03□□□□□ -0.8
NCKAP1-205ENST00000478449 ST18O60284 1047 aa10.03□□□□□ -0.8
NCKAP1-205ENST00000478449 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
NCKAP1-205ENST00000478449 PPP1R37O75864 691 aa10.02□□□□□ -0.81
NCKAP1-205ENST00000478449 VSIG10Q8N0Z9 540 aa10.02□□□□□ -0.81
NCKAP1-205ENST00000478449 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
NCKAP1-205ENST00000478449 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
NCKAP1-205ENST00000478449 PDE4AP27815 886 aa9.94□□□□□ -0.82
NCKAP1-205ENST00000478449 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
NCKAP1-205ENST00000478449 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
NCKAP1-205ENST00000478449 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
NCKAP1-205ENST00000478449 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
NCKAP1-205ENST00000478449 ZNF710Q8N1W2 664 aa9.88□□□□□ -0.83
NCKAP1-205ENST00000478449 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
NCKAP1-205ENST00000478449 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
NCKAP1-205ENST00000478449 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
NCKAP1-205ENST00000478449 CADPS2Q86UW7 1296 aa9.86□□□□□ -0.83
NCKAP1-205ENST00000478449 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
NCKAP1-205ENST00000478449 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
NCKAP1-205ENST00000478449 LARP6Q9BRS8 491 aaKnown RBP9.85□□□□□ -0.83
NCKAP1-205ENST00000478449 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
NCKAP1-205ENST00000478449 EMP3P54852 163 aa9.84□□□□□ -0.83
NCKAP1-205ENST00000478449 CRISPLD2Q9H0B8 497 aa9.84□□□□□ -0.83
NCKAP1-205ENST00000478449 UNC13AQ9UPW8 1703 aa9.84□□□□□ -0.83
NCKAP1-205ENST00000478449 C2orf72A6NCS6 295 aa9.83□□□□□ -0.84
NCKAP1-205ENST00000478449 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
NCKAP1-205ENST00000478449 BICRAQ9NZM4 1560 aa9.83□□□□□ -0.84
NCKAP1-205ENST00000478449 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
NCKAP1-205ENST00000478449 DDX27Q96GQ7 796 aaKnown RBP9.82□□□□□ -0.84
NCKAP1-205ENST00000478449 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
NCKAP1-205ENST00000478449 FAM205CA6NFA0 338 aa9.8□□□□□ -0.84
NCKAP1-205ENST00000478449 KIF3CO14782 793 aa9.8□□□□□ -0.84
NCKAP1-205ENST00000478449 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
NCKAP1-205ENST00000478449 FOXK1P85037 733 aa9.79□□□□□ -0.84
NCKAP1-205ENST00000478449 MFSD10Q14728 455 aa9.79□□□□□ -0.84
NCKAP1-205ENST00000478449 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
NCKAP1-205ENST00000478449 SHROOM4Q9ULL8 1493 aa9.79□□□□□ -0.84
NCKAP1-205ENST00000478449 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
NCKAP1-205ENST00000478449 POTEB3A0JP26 581 aa9.76□□□□□ -0.85
NCKAP1-205ENST00000478449 E2F4Q16254 413 aa9.76□□□□□ -0.85
NCKAP1-205ENST00000478449 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
NCKAP1-205ENST00000478449 POTEBQ6S5H4 581 aa9.76□□□□□ -0.85
NCKAP1-205ENST00000478449 HS3ST6Q96QI5 342 aa9.76□□□□□ -0.85
NCKAP1-205ENST00000478449 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
NCKAP1-205ENST00000478449 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
NCKAP1-205ENST00000478449 ERBB3P21860 1342 aa9.75□□□□□ -0.85
NCKAP1-205ENST00000478449 DSG2Q14126 1118 aa9.74□□□□□ -0.85
NCKAP1-205ENST00000478449 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
NCKAP1-205ENST00000478449 KHSRPQ92945 711 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■■□□ 16.3
NCKAP1-205ENST00000478449 VARS2Q5ST30 1063 aaKnown RBP9.69□□□□□ -0.86
NCKAP1-205ENST00000478449 TBC1D12O60347 775 aa9.68□□□□□ -0.86
NCKAP1-205ENST00000478449 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
NCKAP1-205ENST00000478449 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
NCKAP1-205ENST00000478449 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
NCKAP1-205ENST00000478449 SLC34A2O95436 690 aa9.65□□□□□ -0.86
NCKAP1-205ENST00000478449 NUDT7P0C024 238 aa9.65□□□□□ -0.86
NCKAP1-205ENST00000478449 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
NCKAP1-205ENST00000478449 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
NCKAP1-205ENST00000478449 NBR1Q14596 966 aa9.63□□□□□ -0.87
NCKAP1-205ENST00000478449 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
NCKAP1-205ENST00000478449 BCANQ96GW7 911 aa9.63□□□□□ -0.87
NCKAP1-205ENST00000478449 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
NCKAP1-205ENST00000478449 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
NCKAP1-205ENST00000478449 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
NCKAP1-205ENST00000478449 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
NCKAP1-205ENST00000478449 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
NCKAP1-205ENST00000478449 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
NCKAP1-205ENST00000478449 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
NCKAP1-205ENST00000478449 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
NCKAP1-205ENST00000478449 LHX6Q9UPM6 363 aa9.59□□□□□ -0.87
NCKAP1-205ENST00000478449 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
NCKAP1-205ENST00000478449 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
NCKAP1-205ENST00000478449 DPYSL4O14531 572 aa9.56□□□□□ -0.88
NCKAP1-205ENST00000478449 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
NCKAP1-205ENST00000478449 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-205ENST00000478449 MMRN1Q13201 1228 aa9.54□□□□□ -0.88
NCKAP1-205ENST00000478449 SMYD5Q6GMV2 418 aa9.54□□□□□ -0.88
NCKAP1-205ENST00000478449 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
NCKAP1-205ENST00000478449 KDM4FA0A1W2PPD8 638 aa9.52□□□□□ -0.89
NCKAP1-205ENST00000478449 EVI5O60447 810 aa9.51□□□□□ -0.89
NCKAP1-205ENST00000478449 PDIA6Q15084 440 aa9.51□□□□□ -0.89
NCKAP1-205ENST00000478449 ANKRD13DQ6ZTN6 518 aa9.5□□□□□ -0.89
NCKAP1-205ENST00000478449 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
NCKAP1-205ENST00000478449 AXIN2Q9Y2T1 843 aa9.49□□□□□ -0.89
NCKAP1-205ENST00000478449 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
NCKAP1-205ENST00000478449 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
NCKAP1-205ENST00000478449 PTGER2P43116 358 aa9.47□□□□□ -0.89
NCKAP1-205ENST00000478449 PSDA5PKW4 1024 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-205ENST00000478449 SEMA3EO15041 775 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms