RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PPP1R37O75864 691 aa11.66□□□□□ -0.54
SMNDC1-205ENST00000477763 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
SMNDC1-205ENST00000477763 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
SMNDC1-205ENST00000477763 CDAN1Q8IWY9 1227 aa11.63□□□□□ -0.55
SMNDC1-205ENST00000477763 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
SMNDC1-205ENST00000477763 G3V3G9 751 aa11.62□□□□□ -0.55
SMNDC1-205ENST00000477763 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
SMNDC1-205ENST00000477763 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
SMNDC1-205ENST00000477763 SNPHO15079 494 aa11.6□□□□□ -0.55
SMNDC1-205ENST00000477763 MARVELD3Q96A59 401 aa11.55□□□□□ -0.56
SMNDC1-205ENST00000477763 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
SMNDC1-205ENST00000477763 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
SMNDC1-205ENST00000477763 HOXB3P14651 431 aaPredicted RBP11.47□□□□□ -0.57
SMNDC1-205ENST00000477763 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
SMNDC1-205ENST00000477763 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
SMNDC1-205ENST00000477763 POTEB3A0JP26 581 aa11.45□□□□□ -0.58
SMNDC1-205ENST00000477763 POTEBQ6S5H4 581 aa11.45□□□□□ -0.58
SMNDC1-205ENST00000477763 PDE4AP27815 886 aa11.44□□□□□ -0.58
SMNDC1-205ENST00000477763 NCKAP5LQ9HCH0 1330 aa11.43□□□□□ -0.58
SMNDC1-205ENST00000477763 KIF3CO14782 793 aa11.43□□□□□ -0.58
SMNDC1-205ENST00000477763 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
SMNDC1-205ENST00000477763 TMC2Q8TDI7 906 aa11.43□□□□□ -0.58
SMNDC1-205ENST00000477763 GPHNQ9NQX3 736 aaPredicted RBP11.43□□□□□ -0.58
SMNDC1-205ENST00000477763 EMP3P54852 163 aa11.42□□□□□ -0.58
SMNDC1-205ENST00000477763 VSIG10Q8N0Z9 540 aa11.41□□□□□ -0.58
SMNDC1-205ENST00000477763 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
SMNDC1-205ENST00000477763 MFSD10Q14728 455 aa11.39□□□□□ -0.59
SMNDC1-205ENST00000477763 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
SMNDC1-205ENST00000477763 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
SMNDC1-205ENST00000477763 FOXK1P85037 733 aa11.37□□□□□ -0.59
SMNDC1-205ENST00000477763 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
SMNDC1-205ENST00000477763 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
SMNDC1-205ENST00000477763 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
SMNDC1-205ENST00000477763 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
SMNDC1-205ENST00000477763 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
SMNDC1-205ENST00000477763 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
SMNDC1-205ENST00000477763 DSG2Q14126 1118 aa11.33□□□□□ -0.6
SMNDC1-205ENST00000477763 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
SMNDC1-205ENST00000477763 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
SMNDC1-205ENST00000477763 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
SMNDC1-205ENST00000477763 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
SMNDC1-205ENST00000477763 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
SMNDC1-205ENST00000477763 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
SMNDC1-205ENST00000477763 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
SMNDC1-205ENST00000477763 CAMK2BQ13554 666 aa11.26□□□□□ -0.61
SMNDC1-205ENST00000477763 SLC34A2O95436 690 aa11.25□□□□□ -0.61
SMNDC1-205ENST00000477763 E2F4Q16254 413 aa11.24□□□□□ -0.61
SMNDC1-205ENST00000477763 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
SMNDC1-205ENST00000477763 ERBB3P21860 1342 aa11.23□□□□□ -0.61
SMNDC1-205ENST00000477763 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
SMNDC1-205ENST00000477763 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
SMNDC1-205ENST00000477763 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
SMNDC1-205ENST00000477763 PTCD2Q8WV60 388 aaKnown RBP11.19□□□□□ -0.62
SMNDC1-205ENST00000477763 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
SMNDC1-205ENST00000477763 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
SMNDC1-205ENST00000477763 OXER1Q8TDS5 423 aa11.17□□□□□ -0.62
SMNDC1-205ENST00000477763 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
SMNDC1-205ENST00000477763 ARSIQ5FYB1 569 aa11.16□□□□□ -0.62
SMNDC1-205ENST00000477763 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
SMNDC1-205ENST00000477763 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMNDC1-205ENST00000477763 TBC1D12O60347 775 aa11.14□□□□□ -0.63
SMNDC1-205ENST00000477763 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
SMNDC1-205ENST00000477763 PCDHGA4Q9Y5G9 962 aa11.12□□□□□ -0.63
SMNDC1-205ENST00000477763 ZNF687Q8N1G0 1237 aa11.11□□□□□ -0.63
SMNDC1-205ENST00000477763 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMNDC1-205ENST00000477763 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
SMNDC1-205ENST00000477763 DPYSL4O14531 572 aa11.08□□□□□ -0.64
SMNDC1-205ENST00000477763 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
SMNDC1-205ENST00000477763 SPDYE16A6NNV3 312 aaPredicted RBP11.06□□□□□ -0.64
SMNDC1-205ENST00000477763 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
SMNDC1-205ENST00000477763 PDIA6Q15084 440 aa11.05□□□□□ -0.64
SMNDC1-205ENST00000477763 EVI5O60447 810 aa11.03□□□□□ -0.64
SMNDC1-205ENST00000477763 ANO8Q9HCE9 1232 aaPredicted RBP11.03□□□□□ -0.64
SMNDC1-205ENST00000477763 NUDT7P0C024 238 aa11.02□□□□□ -0.65
SMNDC1-205ENST00000477763 PTGER2P43116 358 aa10.98□□□□□ -0.65
SMNDC1-205ENST00000477763 LHX6Q9UPM6 363 aa10.98□□□□□ -0.65
SMNDC1-205ENST00000477763 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
SMNDC1-205ENST00000477763 PSDA5PKW4 1024 aaPredicted RBP10.95□□□□□ -0.66
SMNDC1-205ENST00000477763 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
SMNDC1-205ENST00000477763 NBR1Q14596 966 aa10.94□□□□□ -0.66
SMNDC1-205ENST00000477763 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
SMNDC1-205ENST00000477763 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
SMNDC1-205ENST00000477763 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
SMNDC1-205ENST00000477763 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
SMNDC1-205ENST00000477763 SEMA3EO15041 775 aa10.91□□□□□ -0.66
SMNDC1-205ENST00000477763 LSM11P83369 360 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMNDC1-205ENST00000477763 PHF14O94880 888 aa10.9□□□□□ -0.66
SMNDC1-205ENST00000477763 FOSBP53539 338 aa10.9□□□□□ -0.66
SMNDC1-205ENST00000477763 BCANQ96GW7 911 aa10.9□□□□□ -0.66
SMNDC1-205ENST00000477763 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
SMNDC1-205ENST00000477763 EPAS1Q99814 870 aa10.89□□□□□ -0.67
SMNDC1-205ENST00000477763 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
SMNDC1-205ENST00000477763 SMYD5Q6GMV2 418 aa10.87□□□□□ -0.67
SMNDC1-205ENST00000477763 DDX12PQ92771 950 aa10.87□□□□□ -0.67
SMNDC1-205ENST00000477763 PBX2P40425 430 aa10.86□□□□□ -0.67
SMNDC1-205ENST00000477763 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
SMNDC1-205ENST00000477763 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
SMNDC1-205ENST00000477763 FBXW7Q969H0 707 aa10.86□□□□□ -0.67
SMNDC1-205ENST00000477763 PCDHGA10Q9Y5H3 936 aa10.86□□□□□ -0.67
SMNDC1-205ENST00000477763 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms