RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 UHRF1BP1Q6BDS2 1440 aa20.74■□□□□ 0.91
SBF1-208ENST00000477234 SPATA31D1Q6ZQQ2 1576 aa20.74■□□□□ 0.91
SBF1-208ENST00000477234 ATP10AO60312 1499 aa20.73■□□□□ 0.91
SBF1-208ENST00000477234 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
SBF1-208ENST00000477234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
SBF1-208ENST00000477234 ARHGEF12Q9NZN5 1544 aa20.72■□□□□ 0.91
SBF1-208ENST00000477234 HECW1Q76N89 1606 aa20.71■□□□□ 0.91
SBF1-208ENST00000477234 PTPRTO14522 1441 aa20.7■□□□□ 0.9
SBF1-208ENST00000477234 IQSEC2Q5JU85 1478 aa20.69■□□□□ 0.9
SBF1-208ENST00000477234 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
SBF1-208ENST00000477234 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
SBF1-208ENST00000477234 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
SBF1-208ENST00000477234 PLCH2O75038 1416 aa20.66■□□□□ 0.9
SBF1-208ENST00000477234 STRCQ7RTU9 1775 aa20.66■□□□□ 0.9
SBF1-208ENST00000477234 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
SBF1-208ENST00000477234 SIGLEC1Q9BZZ2 1709 aa20.64■□□□□ 0.9
SBF1-208ENST00000477234 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
SBF1-208ENST00000477234 ZNF518AQ6AHZ1 1483 aa20.61■□□□□ 0.89
SBF1-208ENST00000477234 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
SBF1-208ENST00000477234 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
SBF1-208ENST00000477234 MYO5CQ9NQX4 1742 aa20.56■□□□□ 0.88
SBF1-208ENST00000477234 EEA1Q15075 1411 aa20.55■□□□□ 0.88
SBF1-208ENST00000477234 TRAPPC8Q9Y2L5 1435 aa20.54■□□□□ 0.88
SBF1-208ENST00000477234 RANGAP1P46060 587 aaPredicted RBP20.54■□□□□ 0.88
SBF1-208ENST00000477234 REREQ9P2R6 1566 aa20.53■□□□□ 0.88
SBF1-208ENST00000477234 CNTLNQ9NXG0 1405 aa20.52■□□□□ 0.87
SBF1-208ENST00000477234 LTBP4Q8N2S1 1624 aa20.51■□□□□ 0.87
SBF1-208ENST00000477234 KDM5CP41229 1560 aa20.5■□□□□ 0.87
SBF1-208ENST00000477234 AGLP35573 1532 aa20.48■□□□□ 0.87
SBF1-208ENST00000477234 C3P01024 1663 aa20.48■□□□□ 0.87
SBF1-208ENST00000477234 NCOA1Q15788 1441 aa20.47■□□□□ 0.87
SBF1-208ENST00000477234 FMN1Q68DA7 1419 aa20.46■□□□□ 0.87
SBF1-208ENST00000477234 CDK13Q14004 1512 aaKnown RBP20.46■□□□□ 0.87
SBF1-208ENST00000477234 CLIP1P30622 1438 aa20.45■□□□□ 0.86
SBF1-208ENST00000477234 MLH3Q9UHC1 1453 aa20.45■□□□□ 0.86
SBF1-208ENST00000477234 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
SBF1-208ENST00000477234 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
SBF1-208ENST00000477234 KIF14Q15058 1648 aa20.45■□□□□ 0.86
SBF1-208ENST00000477234 UBAP1LF5GYI3 381 aa20.43■□□□□ 0.86
SBF1-208ENST00000477234 NPATQ14207 1427 aa20.43■□□□□ 0.86
SBF1-208ENST00000477234 DIP2CQ9Y2E4 1556 aa20.42■□□□□ 0.86
SBF1-208ENST00000477234 PKD2Q13563 968 aa20.42■□□□□ 0.86
SBF1-208ENST00000477234 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
SBF1-208ENST00000477234 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
SBF1-208ENST00000477234 CAMSAP1Q5T5Y3 1602 aa20.38■□□□□ 0.85
SBF1-208ENST00000477234 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
SBF1-208ENST00000477234 ABCA6Q8N139 1617 aa20.35■□□□□ 0.85
SBF1-208ENST00000477234 PLA2R1Q13018 1463 aa20.33■□□□□ 0.85
SBF1-208ENST00000477234 ZMYM3Q14202 1370 aa20.31■□□□□ 0.84
SBF1-208ENST00000477234 ZNF335Q9H4Z2 1342 aaPredicted RBP20.3■□□□□ 0.84
SBF1-208ENST00000477234 TOM1O60784 492 aa20.3■□□□□ 0.84
SBF1-208ENST00000477234 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
SBF1-208ENST00000477234 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
SBF1-208ENST00000477234 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.84
SBF1-208ENST00000477234 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
SBF1-208ENST00000477234 ABCC1P33527 1531 aa20.27■□□□□ 0.83
SBF1-208ENST00000477234 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
SBF1-208ENST00000477234 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
SBF1-208ENST00000477234 PREX2Q70Z35 1606 aa20.25■□□□□ 0.83
SBF1-208ENST00000477234 KIDINS220Q9ULH0 1771 aa20.25■□□□□ 0.83
SBF1-208ENST00000477234 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
SBF1-208ENST00000477234 TCOF1Q13428 1488 aaKnown RBP20.24■□□□□ 0.83
SBF1-208ENST00000477234 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
SBF1-208ENST00000477234 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
SBF1-208ENST00000477234 MED1Q15648 1581 aaPredicted RBP20.21■□□□□ 0.83
SBF1-208ENST00000477234 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
SBF1-208ENST00000477234 CCDC18Q5T9S5 1454 aa20.2■□□□□ 0.82
SBF1-208ENST00000477234 CPS1P31327 1500 aa20.2■□□□□ 0.82
SBF1-208ENST00000477234 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
SBF1-208ENST00000477234 MYO3AQ8NEV4 1616 aa20.2■□□□□ 0.82
SBF1-208ENST00000477234 HSPA1LP34931 641 aa20.18■□□□□ 0.82
SBF1-208ENST00000477234 ARHGAP35Q9NRY4 1499 aa20.17■□□□□ 0.82
SBF1-208ENST00000477234 PTPRKQ15262 1439 aa20.16■□□□□ 0.82
SBF1-208ENST00000477234 PIP4K2BP78356 416 aa20.15■□□□□ 0.82
SBF1-208ENST00000477234 SAMD9LQ8IVG5 1584 aa20.15■□□□□ 0.82
SBF1-208ENST00000477234 CLTCQ00610 1675 aaKnown RBP20.14■□□□□ 0.81
SBF1-208ENST00000477234 PLEKHH2Q8IVE3 1493 aa20.14■□□□□ 0.81
SBF1-208ENST00000477234 A2ML1A8K2U0 1454 aa20.12■□□□□ 0.81
SBF1-208ENST00000477234 KIAA1107Q9UPP5 1409 aa20.11■□□□□ 0.81
SBF1-208ENST00000477234 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
SBF1-208ENST00000477234 GGT6Q6P531 493 aa20.11■□□□□ 0.81
SBF1-208ENST00000477234 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
SBF1-208ENST00000477234 A2MP01023 1474 aa20.11■□□□□ 0.81
SBF1-208ENST00000477234 ATP7AQ04656 1500 aa20.1■□□□□ 0.81
SBF1-208ENST00000477234 SHANK2Q9UPX8 1470 aa20.09■□□□□ 0.81
SBF1-208ENST00000477234 CASKIN1Q8WXD9 1431 aa20.08■□□□□ 0.8
SBF1-208ENST00000477234 PLXNC1O60486 1568 aa20.08■□□□□ 0.8
SBF1-208ENST00000477234 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
SBF1-208ENST00000477234 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
SBF1-208ENST00000477234 ANKLE2Q86XL3 938 aa20.07■□□□□ 0.8
SBF1-208ENST00000477234 SYCP2Q9BX26 1530 aa20.07■□□□□ 0.8
SBF1-208ENST00000477234 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
SBF1-208ENST00000477234 ADGBQ8N7X0 1667 aa20.04■□□□□ 0.8
SBF1-208ENST00000477234 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
SBF1-208ENST00000477234 THEMISQ8N1K5 641 aaPredicted RBP20.04■□□□□ 0.8
SBF1-208ENST00000477234 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
SBF1-208ENST00000477234 INO80Q9ULG1 1556 aaPredicted RBP20.03■□□□□ 0.8
SBF1-208ENST00000477234 FAM135AQ9P2D6 1515 aa20.02■□□□□ 0.8
SBF1-208ENST00000477234 GPATCH8Q9UKJ3 1502 aaKnown RBP20■□□□□ 0.79
SBF1-208ENST00000477234 TNRQ92752 1358 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms