RNA–Protein interactions for RNA: ENST00000477054.6

GSDMB-208, Transcript of gasdermin B, humanhuman

TSL 5

Gene GSDMB, Length 4,655 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-208ENST00000477054 JPH4Q96JJ6 628 aa12.86□□□□□ -0.35
GSDMB-208ENST00000477054 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
GSDMB-208ENST00000477054 TMF1P82094 1093 aa12.85□□□□□ -0.35
GSDMB-208ENST00000477054 RTN4Q9NQC3 1192 aaKnown RBP12.85□□□□□ -0.35
GSDMB-208ENST00000477054 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
GSDMB-208ENST00000477054 DNMBPQ6XZF7 1577 aa12.84□□□□□ -0.35
GSDMB-208ENST00000477054 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
GSDMB-208ENST00000477054 RSPH4AQ5TD94 716 aa12.83□□□□□ -0.35
GSDMB-208ENST00000477054 NESP48681 1621 aa12.82□□□□□ -0.36
GSDMB-208ENST00000477054 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
GSDMB-208ENST00000477054 KANK1Q14678 1352 aa12.82□□□□□ -0.36
GSDMB-208ENST00000477054 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
GSDMB-208ENST00000477054 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
GSDMB-208ENST00000477054 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
GSDMB-208ENST00000477054 RALBP1Q15311 655 aa12.8□□□□□ -0.36
GSDMB-208ENST00000477054 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.36
GSDMB-208ENST00000477054 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
GSDMB-208ENST00000477054 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
GSDMB-208ENST00000477054 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
GSDMB-208ENST00000477054 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
GSDMB-208ENST00000477054 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
GSDMB-208ENST00000477054 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
GSDMB-208ENST00000477054 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
GSDMB-208ENST00000477054 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
GSDMB-208ENST00000477054 CFAP53Q96M91 514 aa12.77□□□□□ -0.36
GSDMB-208ENST00000477054 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
GSDMB-208ENST00000477054 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
GSDMB-208ENST00000477054 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
GSDMB-208ENST00000477054 PRKRIP1Q9H875 184 aaPredicted RBP12.75□□□□□ -0.37
GSDMB-208ENST00000477054 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
GSDMB-208ENST00000477054 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
GSDMB-208ENST00000477054 CUL7Q14999 1698 aa12.73□□□□□ -0.37
GSDMB-208ENST00000477054 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
GSDMB-208ENST00000477054 PTPRGP23470 1445 aa12.73□□□□□ -0.37
GSDMB-208ENST00000477054 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
GSDMB-208ENST00000477054 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
GSDMB-208ENST00000477054 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
GSDMB-208ENST00000477054 USP47Q96K76 1375 aa12.72□□□□□ -0.37
GSDMB-208ENST00000477054 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
GSDMB-208ENST00000477054 KIF15Q9NS87 1388 aa12.71□□□□□ -0.37
GSDMB-208ENST00000477054 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
GSDMB-208ENST00000477054 HECW1Q76N89 1606 aa12.71□□□□□ -0.38
GSDMB-208ENST00000477054 CCDC144AA2RUR9 1427 aa12.7□□□□□ -0.38
GSDMB-208ENST00000477054 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
GSDMB-208ENST00000477054 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
GSDMB-208ENST00000477054 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
GSDMB-208ENST00000477054 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
GSDMB-208ENST00000477054 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
GSDMB-208ENST00000477054 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
GSDMB-208ENST00000477054 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
GSDMB-208ENST00000477054 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
GSDMB-208ENST00000477054 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
GSDMB-208ENST00000477054 RCAN3Q9UKA8 241 aa12.67□□□□□ -0.38
GSDMB-208ENST00000477054 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
GSDMB-208ENST00000477054 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
GSDMB-208ENST00000477054 EIF3AQ14152 1382 aaKnown RBP12.66□□□□□ -0.38
GSDMB-208ENST00000477054 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
GSDMB-208ENST00000477054 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
GSDMB-208ENST00000477054 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
GSDMB-208ENST00000477054 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
GSDMB-208ENST00000477054 PDE3BQ13370 1112 aa12.65□□□□□ -0.38
GSDMB-208ENST00000477054 HSP90AA1P07900 732 aaKnown RBP12.65□□□□□ -0.38
GSDMB-208ENST00000477054 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
GSDMB-208ENST00000477054 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
GSDMB-208ENST00000477054 SENP3Q9H4L4 574 aaPredicted RBP12.65□□□□□ -0.38
GSDMB-208ENST00000477054 NAIPQ13075 1403 aa12.65□□□□□ -0.39
GSDMB-208ENST00000477054 BECN1Q14457 450 aa12.63□□□□□ -0.39
GSDMB-208ENST00000477054 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
GSDMB-208ENST00000477054 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
GSDMB-208ENST00000477054 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
GSDMB-208ENST00000477054 POGKQ9P215 609 aa12.63□□□□□ -0.39
GSDMB-208ENST00000477054 KIF3BO15066 747 aa12.62□□□□□ -0.39
GSDMB-208ENST00000477054 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
GSDMB-208ENST00000477054 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
GSDMB-208ENST00000477054 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
GSDMB-208ENST00000477054 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
GSDMB-208ENST00000477054 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
GSDMB-208ENST00000477054 LAS1LQ9Y4W2 734 aaKnown RBP12.61□□□□□ -0.39
GSDMB-208ENST00000477054 GGT6Q6P531 493 aa12.61□□□□□ -0.39
GSDMB-208ENST00000477054 DAPK1P53355 1430 aa12.6□□□□□ -0.39
GSDMB-208ENST00000477054 KIAA0586Q9BVV6 1533 aa12.6□□□□□ -0.39
GSDMB-208ENST00000477054 FRAT1Q92837 279 aaPredicted RBP12.59□□□□□ -0.39
GSDMB-208ENST00000477054 RGS3P49796 1198 aa12.59□□□□□ -0.39
GSDMB-208ENST00000477054 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
GSDMB-208ENST00000477054 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
GSDMB-208ENST00000477054 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
GSDMB-208ENST00000477054 MS4A1P11836 297 aa12.59□□□□□ -0.39
GSDMB-208ENST00000477054 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
GSDMB-208ENST00000477054 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.4
GSDMB-208ENST00000477054 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
GSDMB-208ENST00000477054 PANK3Q9H999 370 aa12.58□□□□□ -0.4
GSDMB-208ENST00000477054 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
GSDMB-208ENST00000477054 PRG4Q92954 1404 aaPredicted RBP12.57□□□□□ -0.4
GSDMB-208ENST00000477054 KIAA1107Q9UPP5 1409 aa12.57□□□□□ -0.4
GSDMB-208ENST00000477054 SYNJ2O15056 1496 aa12.57□□□□□ -0.4
GSDMB-208ENST00000477054 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
GSDMB-208ENST00000477054 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
GSDMB-208ENST00000477054 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
GSDMB-208ENST00000477054 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
GSDMB-208ENST00000477054 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms