RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 METRNQ9UJH8 293 aa8.76□□□□□ -1.01
SPTLC3-205ENST00000476791 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
SPTLC3-205ENST00000476791 PSEN1P49768 467 aa8.75□□□□□ -1.01
SPTLC3-205ENST00000476791 NAP1L5Q96NT1 182 aaPredicted RBP8.75□□□□□ -1.01
SPTLC3-205ENST00000476791 SLC39A7Q92504 469 aa8.74□□□□□ -1.01
SPTLC3-205ENST00000476791 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
SPTLC3-205ENST00000476791 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
SPTLC3-205ENST00000476791 C7P10643 843 aa8.73□□□□□ -1.01
SPTLC3-205ENST00000476791 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-205ENST00000476791 DEKP35659 375 aaKnown RBP8.72□□□□□ -1.01
SPTLC3-205ENST00000476791 LHX8Q68G74 356 aa8.72□□□□□ -1.01
SPTLC3-205ENST00000476791 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.01
SPTLC3-205ENST00000476791 RGL2O15211 777 aa8.7□□□□□ -1.02
SPTLC3-205ENST00000476791 POTEB2H3BUK9 544 aa8.69□□□□□ -1.02
SPTLC3-205ENST00000476791 SEC24BO95487 1268 aa8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 ZMYND15Q9H091 742 aa8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 CABP2Q9NPB3 220 aa8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 COLQQ9Y215 455 aaPredicted RBP8.68□□□□□ -1.02
SPTLC3-205ENST00000476791 POTEFA5A3E0 1075 aa8.67□□□□□ -1.02
SPTLC3-205ENST00000476791 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 ZFP91Q96JP5 570 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 ACIN1Q9UKV3 1341 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 VGFO15240 615 aaPredicted RBP8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
SPTLC3-205ENST00000476791 IER5LQ5T953 404 aa8.65□□□□□ -1.02
SPTLC3-205ENST00000476791 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-205ENST00000476791 ZNF326Q5BKZ1 582 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-205ENST00000476791 PRDM10Q9NQV6 1147 aa8.63□□□□□ -1.03
SPTLC3-205ENST00000476791 PLCG2P16885 1265 aa8.62□□□□□ -1.03
SPTLC3-205ENST00000476791 ERICH6BQ5W0A0 696 aa8.62□□□□□ -1.03
SPTLC3-205ENST00000476791 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
SPTLC3-205ENST00000476791 IRX5P78411 483 aaPredicted RBP8.62□□□□□ -1.03
SPTLC3-205ENST00000476791 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
SPTLC3-205ENST00000476791 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
SPTLC3-205ENST00000476791 POTEJP0CG39 1038 aa8.61□□□□□ -1.03
SPTLC3-205ENST00000476791 EFCAB3Q8N7B9 438 aa8.6□□□□□ -1.03
SPTLC3-205ENST00000476791 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
SPTLC3-205ENST00000476791 STK25O00506 426 aa8.59□□□□□ -1.03
SPTLC3-205ENST00000476791 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
SPTLC3-205ENST00000476791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.59□□□□□ -1.034e-8■■□□□ 11.8
SPTLC3-205ENST00000476791 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
SPTLC3-205ENST00000476791 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-205ENST00000476791 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
SPTLC3-205ENST00000476791 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-205ENST00000476791 CNPY4Q8N129 248 aa8.57□□□□□ -1.04
SPTLC3-205ENST00000476791 OTUD5Q96G74 571 aa8.57□□□□□ -1.04
SPTLC3-205ENST00000476791 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
SPTLC3-205ENST00000476791 HMGB1P09429 215 aaKnown RBP8.55□□□□□ -1.04
SPTLC3-205ENST00000476791 TICAM2Q86XR7 235 aa8.55□□□□□ -1.04
SPTLC3-205ENST00000476791 ARID3AQ99856 593 aa8.55□□□□□ -1.04
SPTLC3-205ENST00000476791 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
SPTLC3-205ENST00000476791 MYT1LQ9UL68 1186 aa8.53□□□□□ -1.04
SPTLC3-205ENST00000476791 SECISBP2LQ93073 1101 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-205ENST00000476791 CHMP4BQ9H444 224 aaKnown RBP8.52□□□□□ -1.05
SPTLC3-205ENST00000476791 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
SPTLC3-205ENST00000476791 CHGAP10645 457 aaKnown RBP8.51□□□□□ -1.05
SPTLC3-205ENST00000476791 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
SPTLC3-205ENST00000476791 MAMSTRQ6ZN01 415 aa8.51□□□□□ -1.05
SPTLC3-205ENST00000476791 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
SPTLC3-205ENST00000476791 KCNG1Q9UIX4 513 aa8.5□□□□□ -1.05
SPTLC3-205ENST00000476791 SOX12O15370 315 aa8.49□□□□□ -1.05
SPTLC3-205ENST00000476791 CWC22Q9HCG8 908 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-205ENST00000476791 CERS3Q8IU89 383 aa8.48□□□□□ -1.05
SPTLC3-205ENST00000476791 NCLP19338 710 aaKnown RBP8.47□□□□□ -1.05
SPTLC3-205ENST00000476791 PRDM16Q9HAZ2 1276 aa8.47□□□□□ -1.05
SPTLC3-205ENST00000476791 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.05
SPTLC3-205ENST00000476791 MS4A4AQ96JQ5 239 aa8.46□□□□□ -1.05
SPTLC3-205ENST00000476791 L3MBTL3Q96JM7 780 aaPredicted RBP8.46□□□□□ -1.06
SPTLC3-205ENST00000476791 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
SPTLC3-205ENST00000476791 GLIPR1L2Q4G1C9 344 aa8.45□□□□□ -1.06
SPTLC3-205ENST00000476791 TEX2Q8IWB9 1127 aa8.44□□□□□ -1.06
SPTLC3-205ENST00000476791 C1orf115Q9H7X2 142 aa8.44□□□□□ -1.06
SPTLC3-205ENST00000476791 BOLA1Q9Y3E2 137 aa8.44□□□□□ -1.06
SPTLC3-205ENST00000476791 NLRP6P59044 892 aa8.44□□□□□ -1.06
SPTLC3-205ENST00000476791 G3V3G9 751 aa8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 FAM43BQ6ZT52 329 aaPredicted RBP8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 C3orf67Q6ZVT6 689 aa8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 FBXO22Q8NEZ5 403 aa8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
SPTLC3-205ENST00000476791 WWC1Q8IX03 1113 aa8.42□□□□□ -1.06
SPTLC3-205ENST00000476791 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.42□□□□□ -1.06
SPTLC3-205ENST00000476791 IPO4Q8TEX9 1081 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-205ENST00000476791 CLSTN1O94985 981 aa8.41□□□□□ -1.06
SPTLC3-205ENST00000476791 PSMD1Q99460 953 aa8.4□□□□□ -1.07
SPTLC3-205ENST00000476791 NKX1-1Q15270 411 aaPredicted RBP8.39□□□□□ -1.07
SPTLC3-205ENST00000476791 MICALL2Q8IY33 904 aa8.38□□□□□ -1.07
SPTLC3-205ENST00000476791 BBXQ8WY36 941 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-205ENST00000476791 TMEM121BQ9BXQ6 578 aaPredicted RBP8.37□□□□□ -1.07
SPTLC3-205ENST00000476791 PPP1R37O75864 691 aa8.36□□□□□ -1.07
SPTLC3-205ENST00000476791 GTF2E1P29083 439 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-205ENST00000476791 FOXD4L5Q5VV16 416 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-205ENST00000476791 FAM177A1Q8N128 213 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-205ENST00000476791 FOXD4L4Q8WXT5 416 aaPredicted RBP8.35□□□□□ -1.07
SPTLC3-205ENST00000476791 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
SPTLC3-205ENST00000476791 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms