RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MLECQ14165 292 aa19.21■□□□□ 0.67
BRCA1-213ENST00000476777 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
BRCA1-213ENST00000476777 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
BRCA1-213ENST00000476777 PLCH2O75038 1416 aa19.17■□□□□ 0.66
BRCA1-213ENST00000476777 EEA1Q15075 1411 aa19.17■□□□□ 0.66
BRCA1-213ENST00000476777 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
BRCA1-213ENST00000476777 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
BRCA1-213ENST00000476777 ATP10AO60312 1499 aa19.13■□□□□ 0.65
BRCA1-213ENST00000476777 ARHGEF12Q9NZN5 1544 aa19.13■□□□□ 0.65
BRCA1-213ENST00000476777 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
BRCA1-213ENST00000476777 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
BRCA1-213ENST00000476777 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
BRCA1-213ENST00000476777 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
BRCA1-213ENST00000476777 SETD1BQ9UPS6 1966 aaKnown RBP19.06■□□□□ 0.64
BRCA1-213ENST00000476777 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
BRCA1-213ENST00000476777 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
BRCA1-213ENST00000476777 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
BRCA1-213ENST00000476777 AFAP1Q8N556 730 aa19.02■□□□□ 0.64
BRCA1-213ENST00000476777 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
BRCA1-213ENST00000476777 ZNF518AQ6AHZ1 1483 aa19.02■□□□□ 0.63
BRCA1-213ENST00000476777 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
BRCA1-213ENST00000476777 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
BRCA1-213ENST00000476777 FMN1Q68DA7 1419 aa19■□□□□ 0.63
BRCA1-213ENST00000476777 UHRF1BP1Q6BDS2 1440 aa19■□□□□ 0.63
BRCA1-213ENST00000476777 DISP3Q9P2K9 1392 aa19■□□□□ 0.63
BRCA1-213ENST00000476777 KDM5CP41229 1560 aa19■□□□□ 0.63
BRCA1-213ENST00000476777 KIF14Q15058 1648 aa19■□□□□ 0.63
BRCA1-213ENST00000476777 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
BRCA1-213ENST00000476777 TROQ12816 1431 aaPredicted RBP18.97■□□□□ 0.63
BRCA1-213ENST00000476777 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
BRCA1-213ENST00000476777 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
BRCA1-213ENST00000476777 REREQ9P2R6 1566 aa18.94■□□□□ 0.62
BRCA1-213ENST00000476777 PTPRTO14522 1441 aa18.94■□□□□ 0.62
BRCA1-213ENST00000476777 SOCS7O14512 581 aa18.94■□□□□ 0.62
BRCA1-213ENST00000476777 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
BRCA1-213ENST00000476777 MYT1LQ9UL68 1186 aa18.94■□□□□ 0.62
BRCA1-213ENST00000476777 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
BRCA1-213ENST00000476777 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
BRCA1-213ENST00000476777 CLIP1P30622 1438 aa18.91■□□□□ 0.62
BRCA1-213ENST00000476777 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
BRCA1-213ENST00000476777 C3P01024 1663 aa18.91■□□□□ 0.62
BRCA1-213ENST00000476777 AGLP35573 1532 aa18.9■□□□□ 0.62
BRCA1-213ENST00000476777 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
BRCA1-213ENST00000476777 CDC42BPBQ9Y5S2 1711 aa18.89■□□□□ 0.61
BRCA1-213ENST00000476777 LTBP4Q8N2S1 1624 aa18.87■□□□□ 0.61
BRCA1-213ENST00000476777 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
BRCA1-213ENST00000476777 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
BRCA1-213ENST00000476777 ABCC1P33527 1531 aa18.85■□□□□ 0.61
BRCA1-213ENST00000476777 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
BRCA1-213ENST00000476777 SPATA31D1Q6ZQQ2 1576 aa18.84■□□□□ 0.61
BRCA1-213ENST00000476777 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
BRCA1-213ENST00000476777 PREX2Q70Z35 1606 aa18.83■□□□□ 0.61
BRCA1-213ENST00000476777 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
BRCA1-213ENST00000476777 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
BRCA1-213ENST00000476777 ITSN2Q9NZM3 1697 aa18.81■□□□□ 0.6
BRCA1-213ENST00000476777 NPATQ14207 1427 aa18.78■□□□□ 0.6
BRCA1-213ENST00000476777 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.6
BRCA1-213ENST00000476777 ZMYM3Q14202 1370 aa18.77■□□□□ 0.6
BRCA1-213ENST00000476777 CAMSAP1Q5T5Y3 1602 aa18.77■□□□□ 0.6
BRCA1-213ENST00000476777 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.59
BRCA1-213ENST00000476777 CDC42BPAQ5VT25 1732 aa18.75■□□□□ 0.59
BRCA1-213ENST00000476777 SAMD9LQ8IVG5 1584 aa18.75■□□□□ 0.59
BRCA1-213ENST00000476777 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
BRCA1-213ENST00000476777 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
BRCA1-213ENST00000476777 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
BRCA1-213ENST00000476777 ZNF777Q9ULD5 760 aaPredicted RBP18.72■□□□□ 0.59
BRCA1-213ENST00000476777 SPAG9O60271 1321 aaKnown RBP18.72■□□□□ 0.59
BRCA1-213ENST00000476777 SYCP2Q9BX26 1530 aa18.69■□□□□ 0.58
BRCA1-213ENST00000476777 UBAP1LF5GYI3 381 aa18.69■□□□□ 0.58
BRCA1-213ENST00000476777 HNRNPMP52272 730 aaKnown RBP eCLIP18.69■□□□□ 0.58
BRCA1-213ENST00000476777 GPATCH8Q9UKJ3 1502 aaKnown RBP18.69■□□□□ 0.58
BRCA1-213ENST00000476777 PKD2Q13563 968 aa18.68■□□□□ 0.58
BRCA1-213ENST00000476777 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
BRCA1-213ENST00000476777 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
BRCA1-213ENST00000476777 PTPRKQ15262 1439 aa18.67■□□□□ 0.58
BRCA1-213ENST00000476777 KIAA1107Q9UPP5 1409 aa18.66■□□□□ 0.58
BRCA1-213ENST00000476777 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
BRCA1-213ENST00000476777 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
BRCA1-213ENST00000476777 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
BRCA1-213ENST00000476777 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
BRCA1-213ENST00000476777 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
BRCA1-213ENST00000476777 MYO3AQ8NEV4 1616 aa18.65■□□□□ 0.58
BRCA1-213ENST00000476777 CLTCQ00610 1675 aaKnown RBP18.65■□□□□ 0.58
BRCA1-213ENST00000476777 A2MP01023 1474 aa18.65■□□□□ 0.58
BRCA1-213ENST00000476777 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
BRCA1-213ENST00000476777 GGT6Q6P531 493 aa18.63■□□□□ 0.57
BRCA1-213ENST00000476777 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
BRCA1-213ENST00000476777 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
BRCA1-213ENST00000476777 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
BRCA1-213ENST00000476777 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
BRCA1-213ENST00000476777 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
BRCA1-213ENST00000476777 A2ML1A8K2U0 1454 aa18.56■□□□□ 0.56
BRCA1-213ENST00000476777 DNMT1P26358 1616 aaKnown RBP18.54■□□□□ 0.56
BRCA1-213ENST00000476777 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
BRCA1-213ENST00000476777 ZNF644Q9H582 1327 aaPredicted RBP18.53■□□□□ 0.56
BRCA1-213ENST00000476777 HSPA1LP34931 641 aa18.53■□□□□ 0.56
BRCA1-213ENST00000476777 MBD5Q9P267 1494 aa18.52■□□□□ 0.55
BRCA1-213ENST00000476777 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
BRCA1-213ENST00000476777 TOM1O60784 492 aa18.49■□□□□ 0.55
BRCA1-213ENST00000476777 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms