RNA–Protein interactions for RNA: ENST00000476018.2

VSTM4-203, Transcript of V-set and transmembrane domain containing 4, humanhuman

TSL 5

Gene VSTM4, Length 659 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-203ENST00000476018 CDK11AQ9UQ88 783 aaPredicted RBP21.29■■□□□ 1
VSTM4-203ENST00000476018 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
VSTM4-203ENST00000476018 ZMYM4Q5VZL5 1548 aa21.28■■□□□ 1
VSTM4-203ENST00000476018 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
VSTM4-203ENST00000476018 PLCH2O75038 1416 aa21.26■□□□□ 0.99
VSTM4-203ENST00000476018 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
VSTM4-203ENST00000476018 MAGI2Q86UL8 1455 aa21.25■□□□□ 0.99
VSTM4-203ENST00000476018 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
VSTM4-203ENST00000476018 POGZQ7Z3K3 1410 aa21.23■□□□□ 0.99
VSTM4-203ENST00000476018 ILDR1Q86SU0 546 aaPredicted RBP21.22■□□□□ 0.99
VSTM4-203ENST00000476018 KIF14Q15058 1648 aa21.22■□□□□ 0.99
VSTM4-203ENST00000476018 MYO5CQ9NQX4 1742 aa21.21■□□□□ 0.99
VSTM4-203ENST00000476018 CLIP1P30622 1438 aa21.2■□□□□ 0.98
VSTM4-203ENST00000476018 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
VSTM4-203ENST00000476018 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
VSTM4-203ENST00000476018 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
VSTM4-203ENST00000476018 YEATS2Q9ULM3 1422 aa21.17■□□□□ 0.98
VSTM4-203ENST00000476018 RIMS1Q86UR5 1692 aaKnown RBP21.16■□□□□ 0.98
VSTM4-203ENST00000476018 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
VSTM4-203ENST00000476018 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
VSTM4-203ENST00000476018 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
VSTM4-203ENST00000476018 ZNF518AQ6AHZ1 1483 aa21.12■□□□□ 0.97
VSTM4-203ENST00000476018 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
VSTM4-203ENST00000476018 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
VSTM4-203ENST00000476018 ATP10AO60312 1499 aa21.1■□□□□ 0.97
VSTM4-203ENST00000476018 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
VSTM4-203ENST00000476018 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
VSTM4-203ENST00000476018 LMTK3Q96Q04 1460 aa21.09■□□□□ 0.97
VSTM4-203ENST00000476018 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
VSTM4-203ENST00000476018 FER1L4A9Z1Z3 1794 aa21.07■□□□□ 0.96
VSTM4-203ENST00000476018 KDM5CP41229 1560 aa21.06■□□□□ 0.96
VSTM4-203ENST00000476018 MLECQ14165 292 aa21.04■□□□□ 0.96
VSTM4-203ENST00000476018 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
VSTM4-203ENST00000476018 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
VSTM4-203ENST00000476018 ARHGEF12Q9NZN5 1544 aa21.03■□□□□ 0.96
VSTM4-203ENST00000476018 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
VSTM4-203ENST00000476018 AFAP1Q8N556 730 aa21■□□□□ 0.95
VSTM4-203ENST00000476018 MYT1LQ9UL68 1186 aa21■□□□□ 0.95
VSTM4-203ENST00000476018 ABCC1P33527 1531 aa20.99■□□□□ 0.95
VSTM4-203ENST00000476018 MLH3Q9UHC1 1453 aa20.98■□□□□ 0.95
VSTM4-203ENST00000476018 REREQ9P2R6 1566 aa20.97■□□□□ 0.95
VSTM4-203ENST00000476018 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
VSTM4-203ENST00000476018 FBXO41Q8TF61 875 aa20.96■□□□□ 0.95
VSTM4-203ENST00000476018 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
VSTM4-203ENST00000476018 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
VSTM4-203ENST00000476018 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
VSTM4-203ENST00000476018 HSPA2P54652 639 aa20.93■□□□□ 0.94
VSTM4-203ENST00000476018 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
VSTM4-203ENST00000476018 PREX1Q8TCU6 1659 aa20.92■□□□□ 0.94
VSTM4-203ENST00000476018 AGLP35573 1532 aa20.89■□□□□ 0.94
VSTM4-203ENST00000476018 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
VSTM4-203ENST00000476018 KIDINS220Q9ULH0 1771 aa20.85■□□□□ 0.93
VSTM4-203ENST00000476018 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
VSTM4-203ENST00000476018 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
VSTM4-203ENST00000476018 PLEKHH2Q8IVE3 1493 aa20.84■□□□□ 0.93
VSTM4-203ENST00000476018 CEBPAP49715 358 aaPredicted RBP20.84■□□□□ 0.93
VSTM4-203ENST00000476018 ZNF777Q9ULD5 760 aaPredicted RBP20.84■□□□□ 0.93
VSTM4-203ENST00000476018 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
VSTM4-203ENST00000476018 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.93
VSTM4-203ENST00000476018 MTUS2Q5JR59 1369 aa20.83■□□□□ 0.92
VSTM4-203ENST00000476018 SETD1BQ9UPS6 1966 aaKnown RBP20.83■□□□□ 0.92
VSTM4-203ENST00000476018 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
VSTM4-203ENST00000476018 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
VSTM4-203ENST00000476018 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
VSTM4-203ENST00000476018 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
VSTM4-203ENST00000476018 C3P01024 1663 aa20.8■□□□□ 0.92
VSTM4-203ENST00000476018 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
VSTM4-203ENST00000476018 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
VSTM4-203ENST00000476018 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
VSTM4-203ENST00000476018 ATP7AQ04656 1500 aa20.76■□□□□ 0.91
VSTM4-203ENST00000476018 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
VSTM4-203ENST00000476018 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
VSTM4-203ENST00000476018 CERKQ8TCT0 537 aa20.73■□□□□ 0.91
VSTM4-203ENST00000476018 MROH2AA6NES4 1674 aa20.73■□□□□ 0.91
VSTM4-203ENST00000476018 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
VSTM4-203ENST00000476018 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
VSTM4-203ENST00000476018 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
VSTM4-203ENST00000476018 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
VSTM4-203ENST00000476018 A2MP01023 1474 aa20.7■□□□□ 0.9
VSTM4-203ENST00000476018 NPATQ14207 1427 aa20.7■□□□□ 0.9
VSTM4-203ENST00000476018 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
VSTM4-203ENST00000476018 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
VSTM4-203ENST00000476018 ZMYM3Q14202 1370 aa20.66■□□□□ 0.9
VSTM4-203ENST00000476018 PTPRTO14522 1441 aa20.66■□□□□ 0.9
VSTM4-203ENST00000476018 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
VSTM4-203ENST00000476018 RTEL1-TNFRSF6BF6WH68 1400 aa20.63■□□□□ 0.89
VSTM4-203ENST00000476018 CLTCQ00610 1675 aaKnown RBP20.63■□□□□ 0.89
VSTM4-203ENST00000476018 ZNF644Q9H582 1327 aaPredicted RBP20.62■□□□□ 0.89
VSTM4-203ENST00000476018 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
VSTM4-203ENST00000476018 GGT6Q6P531 493 aa20.6■□□□□ 0.89
VSTM4-203ENST00000476018 NCOA2Q15596 1464 aa20.6■□□□□ 0.89
VSTM4-203ENST00000476018 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
VSTM4-203ENST00000476018 CAMSAP1Q5T5Y3 1602 aa20.57■□□□□ 0.88
VSTM4-203ENST00000476018 RSPH4AQ5TD94 716 aa20.57■□□□□ 0.88
VSTM4-203ENST00000476018 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
VSTM4-203ENST00000476018 CAMSAP2Q08AD1 1489 aa20.56■□□□□ 0.88
VSTM4-203ENST00000476018 PTPRKQ15262 1439 aa20.56■□□□□ 0.88
VSTM4-203ENST00000476018 ZNF142P52746 1687 aaPredicted RBP20.56■□□□□ 0.88
VSTM4-203ENST00000476018 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
VSTM4-203ENST00000476018 HOXD11P31277 338 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms