RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 PHF8Q9UPP1 1060 aa10.01□□□□□ -0.81
RPSA-205ENST00000475346 MAMSTRQ6ZN01 415 aa10□□□□□ -0.81
RPSA-205ENST00000475346 HOMEZQ8IX15 550 aa10□□□□□ -0.81
RPSA-205ENST00000475346 G3V3G9 751 aa9.99□□□□□ -0.81
RPSA-205ENST00000475346 LMOD2Q6P5Q4 547 aa9.99□□□□□ -0.81
RPSA-205ENST00000475346 SOX12O15370 315 aa9.97□□□□□ -0.81
RPSA-205ENST00000475346 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
RPSA-205ENST00000475346 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
RPSA-205ENST00000475346 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
RPSA-205ENST00000475346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.94□□□□□ -0.82
RPSA-205ENST00000475346 NLRP6P59044 892 aa9.93□□□□□ -0.82
RPSA-205ENST00000475346 C3orf67Q6ZVT6 689 aa9.93□□□□□ -0.82
RPSA-205ENST00000475346 SLAIN1Q8ND83 568 aa9.93□□□□□ -0.82
RPSA-205ENST00000475346 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
RPSA-205ENST00000475346 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
RPSA-205ENST00000475346 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
RPSA-205ENST00000475346 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
RPSA-205ENST00000475346 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
RPSA-205ENST00000475346 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
RPSA-205ENST00000475346 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
RPSA-205ENST00000475346 FBXO22Q8NEZ5 403 aa9.87□□□□□ -0.83
RPSA-205ENST00000475346 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
RPSA-205ENST00000475346 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
RPSA-205ENST00000475346 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
RPSA-205ENST00000475346 SUPT5HO00267 1087 aaKnown RBP9.82□□□□□ -0.84
RPSA-205ENST00000475346 PPP1R37O75864 691 aa9.82□□□□□ -0.84
RPSA-205ENST00000475346 ZC3H15Q8WU90 426 aaKnown RBP9.81□□□□□ -0.84
RPSA-205ENST00000475346 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
RPSA-205ENST00000475346 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
RPSA-205ENST00000475346 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
RPSA-205ENST00000475346 TMEM92Q6UXU6 159 aa9.73□□□□□ -0.85
RPSA-205ENST00000475346 SEMA3EO15041 775 aa9.72□□□□□ -0.85
RPSA-205ENST00000475346 SNPHO15079 494 aa9.7□□□□□ -0.86
RPSA-205ENST00000475346 E2F4Q16254 413 aa9.7□□□□□ -0.86
RPSA-205ENST00000475346 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
RPSA-205ENST00000475346 TMC2Q8TDI7 906 aa9.67□□□□□ -0.86
RPSA-205ENST00000475346 C2orf72A6NCS6 295 aa9.66□□□□□ -0.86
RPSA-205ENST00000475346 ST18O60284 1047 aa9.66□□□□□ -0.86
RPSA-205ENST00000475346 ZNF710Q8N1W2 664 aa9.65□□□□□ -0.86
RPSA-205ENST00000475346 LCE2DQ5TA82 110 aaPredicted RBP9.64□□□□□ -0.87
RPSA-205ENST00000475346 POTEMA6NI47 508 aa9.63□□□□□ -0.87
RPSA-205ENST00000475346 ZMYND10O75800 440 aa9.62□□□□□ -0.87
RPSA-205ENST00000475346 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
RPSA-205ENST00000475346 MARVELD3Q96A59 401 aa9.62□□□□□ -0.87
RPSA-205ENST00000475346 HOXB3P14651 431 aaPredicted RBP9.6□□□□□ -0.87
RPSA-205ENST00000475346 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
RPSA-205ENST00000475346 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
RPSA-205ENST00000475346 PODXL2Q9NZ53 605 aa9.59□□□□□ -0.87
RPSA-205ENST00000475346 KIF3CO14782 793 aa9.57□□□□□ -0.88
RPSA-205ENST00000475346 RIMBP2O15034 1052 aa9.57□□□□□ -0.88
RPSA-205ENST00000475346 EMP3P54852 163 aa9.56□□□□□ -0.88
RPSA-205ENST00000475346 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
RPSA-205ENST00000475346 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
RPSA-205ENST00000475346 LARP6Q9BRS8 491 aaKnown RBP9.55□□□□□ -0.88
RPSA-205ENST00000475346 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
RPSA-205ENST00000475346 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
RPSA-205ENST00000475346 DSG2Q14126 1118 aa9.54□□□□□ -0.88
RPSA-205ENST00000475346 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
RPSA-205ENST00000475346 NCKAP5LQ9HCH0 1330 aa9.54□□□□□ -0.88
RPSA-205ENST00000475346 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
RPSA-205ENST00000475346 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
RPSA-205ENST00000475346 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
RPSA-205ENST00000475346 PDE4AP27815 886 aa9.52□□□□□ -0.89
RPSA-205ENST00000475346 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
RPSA-205ENST00000475346 AK7Q96M32 723 aa9.52□□□□□ -0.89
RPSA-205ENST00000475346 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
RPSA-205ENST00000475346 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
RPSA-205ENST00000475346 HOXB1P14653 301 aaPredicted RBP9.49□□□□□ -0.89
RPSA-205ENST00000475346 FOXK1P85037 733 aa9.49□□□□□ -0.89
RPSA-205ENST00000475346 PPP1R15BQ5SWA1 713 aa9.49□□□□□ -0.89
RPSA-205ENST00000475346 RBM26Q5T8P6 1007 aaKnown RBP9.49□□□□□ -0.89
RPSA-205ENST00000475346 GPIHBP1Q8IV16 184 aa9.49□□□□□ -0.89
RPSA-205ENST00000475346 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
RPSA-205ENST00000475346 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
RPSA-205ENST00000475346 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
RPSA-205ENST00000475346 ERBB3P21860 1342 aa9.48□□□□□ -0.89
RPSA-205ENST00000475346 MFSD10Q14728 455 aa9.47□□□□□ -0.89
RPSA-205ENST00000475346 DDX27Q96GQ7 796 aaKnown RBP9.47□□□□□ -0.89
RPSA-205ENST00000475346 KDM4CQ9H3R0 1056 aa9.47□□□□□ -0.89
RPSA-205ENST00000475346 NUDT7P0C024 238 aa9.46□□□□□ -0.9
RPSA-205ENST00000475346 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
RPSA-205ENST00000475346 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
RPSA-205ENST00000475346 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
RPSA-205ENST00000475346 HS3ST6Q96QI5 342 aa9.45□□□□□ -0.9
RPSA-205ENST00000475346 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
RPSA-205ENST00000475346 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
RPSA-205ENST00000475346 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
RPSA-205ENST00000475346 ARID3AQ99856 593 aa9.44□□□□□ -0.9
RPSA-205ENST00000475346 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
RPSA-205ENST00000475346 POTEB3A0JP26 581 aa9.42□□□□□ -0.9
RPSA-205ENST00000475346 VARS2Q5ST30 1063 aaKnown RBP9.42□□□□□ -0.9
RPSA-205ENST00000475346 POTEBQ6S5H4 581 aa9.42□□□□□ -0.9
RPSA-205ENST00000475346 TRIM66O15016 1216 aa9.41□□□□□ -0.9
RPSA-205ENST00000475346 PDE4DQ08499 809 aa9.41□□□□□ -0.9
RPSA-205ENST00000475346 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
RPSA-205ENST00000475346 TBC1D12O60347 775 aa9.4□□□□□ -0.9
RPSA-205ENST00000475346 SLC34A2O95436 690 aa9.4□□□□□ -0.9
RPSA-205ENST00000475346 CAMK2BQ13554 666 aa9.4□□□□□ -0.9
RPSA-205ENST00000475346 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
RPSA-205ENST00000475346 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms