RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 KANK1Q14678 1352 aa14.02□□□□□ -0.17
VAPB-204ENST00000475243 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
VAPB-204ENST00000475243 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
VAPB-204ENST00000475243 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
VAPB-204ENST00000475243 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
VAPB-204ENST00000475243 HDGFP51858 240 aaKnown RBP13.97□□□□□ -0.17
VAPB-204ENST00000475243 MCCP23508 829 aa13.96□□□□□ -0.17
VAPB-204ENST00000475243 GNL2Q13823 731 aaKnown RBP13.96□□□□□ -0.17
VAPB-204ENST00000475243 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
VAPB-204ENST00000475243 NRDCO43847 1150 aa13.94□□□□□ -0.18
VAPB-204ENST00000475243 CSB-PGBD3P0DP91 1061 aa13.94□□□□□ -0.18
VAPB-204ENST00000475243 PKD2Q13563 968 aa13.93□□□□□ -0.18
VAPB-204ENST00000475243 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
VAPB-204ENST00000475243 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
VAPB-204ENST00000475243 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
VAPB-204ENST00000475243 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
VAPB-204ENST00000475243 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
VAPB-204ENST00000475243 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
VAPB-204ENST00000475243 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
VAPB-204ENST00000475243 GZF1Q9H116 711 aaPredicted RBP13.91□□□□□ -0.18
VAPB-204ENST00000475243 CUX2O14529 1486 aa13.91□□□□□ -0.18
VAPB-204ENST00000475243 NUTM2DQ5VT03 806 aaPredicted RBP13.91□□□□□ -0.18
VAPB-204ENST00000475243 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
VAPB-204ENST00000475243 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
VAPB-204ENST00000475243 CHAF1AQ13111 956 aaPredicted RBP13.9□□□□□ -0.19
VAPB-204ENST00000475243 ROCK2O75116 1388 aaKnown RBP13.89□□□□□ -0.19
VAPB-204ENST00000475243 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
VAPB-204ENST00000475243 KTN1Q86UP2 1357 aaKnown RBP13.88□□□□□ -0.19
VAPB-204ENST00000475243 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
VAPB-204ENST00000475243 SOGA1O94964 1423 aa13.87□□□□□ -0.19
VAPB-204ENST00000475243 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
VAPB-204ENST00000475243 NUTM2FA1L443 756 aa13.86□□□□□ -0.19
VAPB-204ENST00000475243 ARID3AQ99856 593 aa13.86□□□□□ -0.19
VAPB-204ENST00000475243 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
VAPB-204ENST00000475243 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
VAPB-204ENST00000475243 NACADO15069 1562 aa13.86□□□□□ -0.19
VAPB-204ENST00000475243 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
VAPB-204ENST00000475243 CCDC146Q8IYE0 955 aa13.85□□□□□ -0.19
VAPB-204ENST00000475243 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
VAPB-204ENST00000475243 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
VAPB-204ENST00000475243 DEKP35659 375 aaKnown RBP13.84□□□□□ -0.19
VAPB-204ENST00000475243 SLC4A10Q6U841 1118 aa13.84□□□□□ -0.19
VAPB-204ENST00000475243 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
VAPB-204ENST00000475243 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
VAPB-204ENST00000475243 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
VAPB-204ENST00000475243 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
VAPB-204ENST00000475243 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
VAPB-204ENST00000475243 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
VAPB-204ENST00000475243 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
VAPB-204ENST00000475243 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
VAPB-204ENST00000475243 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
VAPB-204ENST00000475243 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
VAPB-204ENST00000475243 NUP155O75694 1391 aa13.81□□□□□ -0.2
VAPB-204ENST00000475243 SMC4Q9NTJ3 1288 aa13.81□□□□□ -0.2
VAPB-204ENST00000475243 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
VAPB-204ENST00000475243 HSP90B1P14625 803 aaKnown RBP13.8□□□□□ -0.2
VAPB-204ENST00000475243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■■□□□ 14.1
VAPB-204ENST00000475243 PDE4CQ08493 712 aa13.8□□□□□ -0.2
VAPB-204ENST00000475243 CCER2I3L3R5 266 aa13.79□□□□□ -0.2
VAPB-204ENST00000475243 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.28e-7■■■■□ 23.4
VAPB-204ENST00000475243 RWDD1Q9H446 243 aaPredicted RBP13.79□□□□□ -0.2
VAPB-204ENST00000475243 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
VAPB-204ENST00000475243 TMX4Q9H1E5 349 aaPredicted RBP13.79□□□□□ -0.2
VAPB-204ENST00000475243 SPAG9O60271 1321 aaKnown RBP13.79□□□□□ -0.2
VAPB-204ENST00000475243 KIF3BO15066 747 aa13.78□□□□□ -0.2
VAPB-204ENST00000475243 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
VAPB-204ENST00000475243 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
VAPB-204ENST00000475243 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
VAPB-204ENST00000475243 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
VAPB-204ENST00000475243 KIAA2012Q0VF49 1180 aa13.78□□□□□ -0.2
VAPB-204ENST00000475243 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.2
VAPB-204ENST00000475243 GBP4Q96PP9 640 aa13.77□□□□□ -0.2
VAPB-204ENST00000475243 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
VAPB-204ENST00000475243 G3V3G9 751 aa13.77□□□□□ -0.21
VAPB-204ENST00000475243 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
VAPB-204ENST00000475243 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
VAPB-204ENST00000475243 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
VAPB-204ENST00000475243 AMPHP49418 695 aa13.75□□□□□ -0.21
VAPB-204ENST00000475243 FOXD4L5Q5VV16 416 aaPredicted RBP13.75□□□□□ -0.21
VAPB-204ENST00000475243 FOXD4L4Q8WXT5 416 aaPredicted RBP13.75□□□□□ -0.21
VAPB-204ENST00000475243 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
VAPB-204ENST00000475243 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
VAPB-204ENST00000475243 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
VAPB-204ENST00000475243 RALBP1Q15311 655 aa13.74□□□□□ -0.21
VAPB-204ENST00000475243 RRP7AQ9Y3A4 280 aaKnown RBP13.73□□□□□ -0.21
VAPB-204ENST00000475243 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
VAPB-204ENST00000475243 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
VAPB-204ENST00000475243 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
VAPB-204ENST00000475243 TRAK1Q9UPV9 953 aa13.73□□□□□ -0.21
VAPB-204ENST00000475243 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
VAPB-204ENST00000475243 PRM3Q9NNZ6 103 aa13.72□□□□□ -0.21
VAPB-204ENST00000475243 TOMM22Q9NS69 142 aa13.72□□□□□ -0.21
VAPB-204ENST00000475243 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
VAPB-204ENST00000475243 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
VAPB-204ENST00000475243 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
VAPB-204ENST00000475243 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
VAPB-204ENST00000475243 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
VAPB-204ENST00000475243 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.21
VAPB-204ENST00000475243 GTF2E1P29083 439 aaPredicted RBP13.7□□□□□ -0.22
VAPB-204ENST00000475243 ELL2O00472 640 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms