RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PREX2Q70Z35 1606 aa29.25■■■□□ 2.27
SSR1-204ENST00000474597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.25■■■□□ 2.278e-6■□□□□ 10.5
SSR1-204ENST00000474597 KCNH8Q96L42 1107 aa29.24■■■□□ 2.27
SSR1-204ENST00000474597 TTC37Q6PGP7 1564 aa29.23■■■□□ 2.27
SSR1-204ENST00000474597 ABCC5O15440 1437 aa29.22■■■□□ 2.27
SSR1-204ENST00000474597 NAIPQ13075 1403 aa29.22■■■□□ 2.27
SSR1-204ENST00000474597 AKNAQ7Z591 1439 aa29.22■■■□□ 2.27
SSR1-204ENST00000474597 CDC42BPBQ9Y5S2 1711 aa29.22■■■□□ 2.27
SSR1-204ENST00000474597 GCC2Q8IWJ2 1684 aa29.21■■■□□ 2.27
SSR1-204ENST00000474597 MYO5CQ9NQX4 1742 aa29.21■■■□□ 2.27
SSR1-204ENST00000474597 RRP7BPQ9NSQ0 103 aa29.19■■■□□ 2.26
SSR1-204ENST00000474597 NPM1P06748 294 aaKnown RBP eCLIP29.17■■■□□ 2.26
SSR1-204ENST00000474597 ROCK1Q13464 1354 aa29.16■■■□□ 2.26
SSR1-204ENST00000474597 CROCC2H7BZ55 1655 aa29.16■■■□□ 2.26
SSR1-204ENST00000474597 WDR7Q9Y4E6 1490 aa29.16■■■□□ 2.26
SSR1-204ENST00000474597 ARHGAP5Q13017 1502 aa29.15■■■□□ 2.26
SSR1-204ENST00000474597 ADGBQ8N7X0 1667 aa29.13■■■□□ 2.25
SSR1-204ENST00000474597 SAMD9LQ8IVG5 1584 aa29.1■■■□□ 2.25
SSR1-204ENST00000474597 ASXL2Q76L83 1435 aa29.08■■■□□ 2.25
SSR1-204ENST00000474597 ARHGEF5Q12774 1597 aa29.06■■■□□ 2.24
SSR1-204ENST00000474597 PLCH2O75038 1416 aa29.06■■■□□ 2.24
SSR1-204ENST00000474597 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
SSR1-204ENST00000474597 RIMBP3CA6NJZ7 1639 aa29.04■■■□□ 2.24
SSR1-204ENST00000474597 RIMBP3BA6NNM3 1639 aa29.04■■■□□ 2.24
SSR1-204ENST00000474597 RIMBP3Q9UFD9 1639 aa29.04■■■□□ 2.24
SSR1-204ENST00000474597 HNRNPMP52272 730 aaKnown RBP eCLIP29.04■■■□□ 2.24
SSR1-204ENST00000474597 MAPKBP1O60336 1514 aa29.03■■■□□ 2.24
SSR1-204ENST00000474597 ADGRL2O95490 1459 aa29.03■■■□□ 2.24
SSR1-204ENST00000474597 PLEKHH2Q8IVE3 1493 aa29.03■■■□□ 2.24
SSR1-204ENST00000474597 TSPY4P0CV99 314 aa29.03■■■□□ 2.24
SSR1-204ENST00000474597 TSPY10P0CW01 314 aa29.03■■■□□ 2.24
SSR1-204ENST00000474597 RSPH4AQ5TD94 716 aa29.02■■■□□ 2.24
SSR1-204ENST00000474597 ANKRD30AQ9BXX3 1397 aa29.02■■■□□ 2.24
SSR1-204ENST00000474597 ACIN1Q9UKV3 1341 aaKnown RBP29■■■□□ 2.23
SSR1-204ENST00000474597 EFCAB2Q5VUJ9 269 aa29■■■□□ 2.23
SSR1-204ENST00000474597 CCDC141Q6ZP82 1450 aa29■■■□□ 2.23
SSR1-204ENST00000474597 MBD5Q9P267 1494 aa29■■■□□ 2.23
SSR1-204ENST00000474597 C9orf84Q5VXU9 1444 aa29■■■□□ 2.23
SSR1-204ENST00000474597 KDM6BO15054 1643 aa28.99■■■□□ 2.23
SSR1-204ENST00000474597 NCOA1Q15788 1441 aa28.99■■■□□ 2.23
SSR1-204ENST00000474597 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
SSR1-204ENST00000474597 ABCA9Q8IUA7 1624 aa28.99■■■□□ 2.23
SSR1-204ENST00000474597 ARAP3Q8WWN8 1544 aa28.97■■■□□ 2.23
SSR1-204ENST00000474597 TRIM52Q96A61 297 aa28.96■■■□□ 2.23
SSR1-204ENST00000474597 KIAA1107Q9UPP5 1409 aa28.95■■■□□ 2.23
SSR1-204ENST00000474597 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
SSR1-204ENST00000474597 ABCC1P33527 1531 aa28.88■■■□□ 2.21
SSR1-204ENST00000474597 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
SSR1-204ENST00000474597 FANCAO15360 1455 aa28.84■■■□□ 2.21
SSR1-204ENST00000474597 ANKRD50Q9ULJ7 1429 aa28.84■■■□□ 2.21
SSR1-204ENST00000474597 ARHGEF12Q9NZN5 1544 aa28.83■■■□□ 2.21
SSR1-204ENST00000474597 KIF15Q9NS87 1388 aa28.83■■■□□ 2.21
SSR1-204ENST00000474597 NEUROD1Q13562 356 aa28.79■■■□□ 2.2
SSR1-204ENST00000474597 SIN3AQ96ST3 1273 aa28.78■■■□□ 2.2
SSR1-204ENST00000474597 MPHOSPH9Q99550 1183 aa28.78■■■□□ 2.2
SSR1-204ENST00000474597 CD109Q6YHK3 1445 aa28.76■■■□□ 2.19
SSR1-204ENST00000474597 PLXNC1O60486 1568 aa28.76■■■□□ 2.19
SSR1-204ENST00000474597 TRAPPC8Q9Y2L5 1435 aa28.75■■■□□ 2.19
SSR1-204ENST00000474597 CFAP74Q9C0B2 1584 aa28.74■■■□□ 2.19
SSR1-204ENST00000474597 ADGRL1O94910 1474 aa28.73■■■□□ 2.19
SSR1-204ENST00000474597 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
SSR1-204ENST00000474597 TIMELESSQ9UNS1 1208 aa28.7■■■□□ 2.18
SSR1-204ENST00000474597 DENND4BO75064 1496 aaPredicted RBP28.7■■■□□ 2.18
SSR1-204ENST00000474597 SCAPERQ9BY12 1400 aa28.68■■■□□ 2.18
SSR1-204ENST00000474597 SPAG9O60271 1321 aaKnown RBP28.68■■■□□ 2.18
SSR1-204ENST00000474597 DUOX2Q9NRD8 1548 aa28.66■■■□□ 2.18
SSR1-204ENST00000474597 AFAP1Q8N556 730 aa28.66■■■□□ 2.18
SSR1-204ENST00000474597 PZPP20742 1482 aa28.66■■■□□ 2.18
SSR1-204ENST00000474597 RTEL1-TNFRSF6BF6WH68 1400 aa28.65■■■□□ 2.18
SSR1-204ENST00000474597 NUP155O75694 1391 aa28.63■■■□□ 2.17
SSR1-204ENST00000474597 TONSLQ96HA7 1378 aa28.63■■■□□ 2.17
SSR1-204ENST00000474597 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
SSR1-204ENST00000474597 KDM5DQ9BY66 1539 aa28.61■■■□□ 2.17
SSR1-204ENST00000474597 GLI2P10070 1586 aa28.6■■■□□ 2.17
SSR1-204ENST00000474597 FOXD1Q16676 465 aa28.59■■■□□ 2.17
SSR1-204ENST00000474597 MAP3K4Q9Y6R4 1608 aa28.59■■■□□ 2.17
SSR1-204ENST00000474597 MYT1LQ9UL68 1186 aa28.59■■■□□ 2.17
SSR1-204ENST00000474597 ERBINQ96RT1 1412 aa28.59■■■□□ 2.17
SSR1-204ENST00000474597 ATP7AQ04656 1500 aa28.58■■■□□ 2.17
SSR1-204ENST00000474597 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
SSR1-204ENST00000474597 ZNF316A6NFI3 1004 aaPredicted RBP28.57■■■□□ 2.16
SSR1-204ENST00000474597 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
SSR1-204ENST00000474597 NEO1Q92859 1461 aa28.56■■■□□ 2.16
SSR1-204ENST00000474597 UNC13BO14795 1591 aa28.55■■■□□ 2.16
SSR1-204ENST00000474597 ANKRD30BQ9BXX2 1392 aa28.54■■■□□ 2.16
SSR1-204ENST00000474597 PKD2Q13563 968 aa28.53■■■□□ 2.16
SSR1-204ENST00000474597 DIP2BQ9P265 1576 aa28.53■■■□□ 2.16
SSR1-204ENST00000474597 FAM69CQ0P6D2 419 aa28.51■■■□□ 2.15
SSR1-204ENST00000474597 FAM135AQ9P2D6 1515 aa28.49■■■□□ 2.15
SSR1-204ENST00000474597 POGZQ7Z3K3 1410 aa28.49■■■□□ 2.15
SSR1-204ENST00000474597 PPP1R15AO75807 674 aaPredicted RBP28.48■■■□□ 2.15
SSR1-204ENST00000474597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.47■■■□□ 2.151e-10■■■□□ 14.7
SSR1-204ENST00000474597 KIDINS220Q9ULH0 1771 aa28.46■■■□□ 2.15
SSR1-204ENST00000474597 KDM5CP41229 1560 aa28.45■■■□□ 2.15
SSR1-204ENST00000474597 IQGAP3Q86VI3 1631 aa28.44■■■□□ 2.14
SSR1-204ENST00000474597 RPRD2Q5VT52 1461 aaKnown RBP28.44■■■□□ 2.14
SSR1-204ENST00000474597 MAGI2Q86UL8 1455 aa28.42■■■□□ 2.14
SSR1-204ENST00000474597 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
SSR1-204ENST00000474597 TSPOAP1O95153 1857 aa28.41■■■□□ 2.14
SSR1-204ENST00000474597 MLH3Q9UHC1 1453 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms