RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 DAPK1P53355 1430 aa30.39■■■□□ 2.46
RNF220-209ENST00000474064 GPATCH8Q9UKJ3 1502 aaKnown RBP30.36■■■□□ 2.45
RNF220-209ENST00000474064 ABCC5O15440 1437 aa30.36■■■□□ 2.45
RNF220-209ENST00000474064 KDM6BO15054 1643 aa30.34■■■□□ 2.45
RNF220-209ENST00000474064 ERCC6L2Q5T890 1561 aa30.33■■■□□ 2.45
RNF220-209ENST00000474064 GCC2Q8IWJ2 1684 aa30.31■■■□□ 2.44
RNF220-209ENST00000474064 CAMSAP2Q08AD1 1489 aa30.31■■■□□ 2.44
RNF220-209ENST00000474064 ADCY10Q96PN6 1610 aa30.31■■■□□ 2.44
RNF220-209ENST00000474064 AKNAQ7Z591 1439 aa30.3■■■□□ 2.44
RNF220-209ENST00000474064 DNMT1P26358 1616 aaKnown RBP30.3■■■□□ 2.44
RNF220-209ENST00000474064 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
RNF220-209ENST00000474064 ITSN2Q9NZM3 1697 aa30.27■■■□□ 2.44
RNF220-209ENST00000474064 ROCK1Q13464 1354 aa30.23■■■□□ 2.43
RNF220-209ENST00000474064 TIMELESSQ9UNS1 1208 aa30.22■■■□□ 2.43
RNF220-209ENST00000474064 TONSLQ96HA7 1378 aa30.21■■■□□ 2.43
RNF220-209ENST00000474064 ABCC10Q5T3U5 1492 aa30.21■■■□□ 2.43
RNF220-209ENST00000474064 PPP1R15AO75807 674 aaPredicted RBP30.19■■■□□ 2.42
RNF220-209ENST00000474064 MPHOSPH9Q99550 1183 aa30.18■■■□□ 2.42
RNF220-209ENST00000474064 FOXD1Q16676 465 aa30.17■■■□□ 2.42
RNF220-209ENST00000474064 CDC42BPAQ5VT25 1732 aa30.16■■■□□ 2.42
RNF220-209ENST00000474064 DENND4BO75064 1496 aaPredicted RBP30.15■■■□□ 2.42
RNF220-209ENST00000474064 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
RNF220-209ENST00000474064 SUPT16HQ9Y5B9 1047 aaKnown RBP30.15■■■□□ 2.42
RNF220-209ENST00000474064 NCOA1Q15788 1441 aa30.1■■■□□ 2.41
RNF220-209ENST00000474064 HNRNPMP52272 730 aaKnown RBP eCLIP30.09■■■□□ 2.41
RNF220-209ENST00000474064 ABCC2Q92887 1545 aa30.08■■■□□ 2.41
RNF220-209ENST00000474064 KCNH8Q96L42 1107 aa30.08■■■□□ 2.41
RNF220-209ENST00000474064 HIRIP3Q9BW71 556 aaPredicted RBP30.06■■■□□ 2.4
RNF220-209ENST00000474064 ANP32EQ9BTT0 268 aa30.05■■■□□ 2.4
RNF220-209ENST00000474064 SLC4A1APQ9BWU0 796 aaKnown RBP30.04■■■□□ 2.4
RNF220-209ENST00000474064 ANKRD30AQ9BXX3 1397 aa30.04■■■□□ 2.4
RNF220-209ENST00000474064 CROCC2H7BZ55 1655 aa30.02■■■□□ 2.4
RNF220-209ENST00000474064 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
RNF220-209ENST00000474064 TSPY4P0CV99 314 aa30.01■■■□□ 2.39
RNF220-209ENST00000474064 TSPY10P0CW01 314 aa30.01■■■□□ 2.39
RNF220-209ENST00000474064 TSHZ2Q9NRE2 1034 aa30.01■■■□□ 2.39
RNF220-209ENST00000474064 ADGRL2O95490 1459 aa29.99■■■□□ 2.39
RNF220-209ENST00000474064 C9orf84Q5VXU9 1444 aa29.98■■■□□ 2.39
RNF220-209ENST00000474064 BCL11AQ9H165 835 aa29.97■■■□□ 2.39
RNF220-209ENST00000474064 TTC37Q6PGP7 1564 aa29.96■■■□□ 2.39
RNF220-209ENST00000474064 CDC42BPBQ9Y5S2 1711 aa29.94■■■□□ 2.38
RNF220-209ENST00000474064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.94■■■□□ 2.38
RNF220-209ENST00000474064 ANKRD50Q9ULJ7 1429 aa29.93■■■□□ 2.38
RNF220-209ENST00000474064 PREX2Q70Z35 1606 aa29.92■■■□□ 2.38
RNF220-209ENST00000474064 SAMD9LQ8IVG5 1584 aa29.92■■■□□ 2.38
RNF220-209ENST00000474064 ARHGAP5Q13017 1502 aa29.91■■■□□ 2.38
RNF220-209ENST00000474064 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
RNF220-209ENST00000474064 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
RNF220-209ENST00000474064 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
RNF220-209ENST00000474064 ZCCHC11Q5TAX3 1644 aaKnown RBP29.9■■■□□ 2.38
RNF220-209ENST00000474064 SHANK2Q9UPX8 1470 aa29.89■■■□□ 2.38
RNF220-209ENST00000474064 PZPP20742 1482 aa29.89■■■□□ 2.38
RNF220-209ENST00000474064 L3MBTL2Q969R5 705 aa29.87■■■□□ 2.37
RNF220-209ENST00000474064 DDX10Q13206 875 aaKnown RBP29.87■■■□□ 2.37
RNF220-209ENST00000474064 UHRF1BP1LA0JNW5 1464 aa29.86■■■□□ 2.37
RNF220-209ENST00000474064 KIF15Q9NS87 1388 aa29.85■■■□□ 2.37
RNF220-209ENST00000474064 CCDC141Q6ZP82 1450 aa29.84■■■□□ 2.37
RNF220-209ENST00000474064 SYCP2Q9BX26 1530 aa29.84■■■□□ 2.37
RNF220-209ENST00000474064 ARHGEF5Q12774 1597 aa29.84■■■□□ 2.37
RNF220-209ENST00000474064 PKD2Q13563 968 aa29.83■■■□□ 2.37
RNF220-209ENST00000474064 NUP155O75694 1391 aa29.81■■■□□ 2.36
RNF220-209ENST00000474064 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
RNF220-209ENST00000474064 RSPH4AQ5TD94 716 aa29.78■■■□□ 2.36
RNF220-209ENST00000474064 MYO5CQ9NQX4 1742 aa29.78■■■□□ 2.36
RNF220-209ENST00000474064 OSCARQ8IYS5 282 aa29.76■■■□□ 2.36
RNF220-209ENST00000474064 KIAA1107Q9UPP5 1409 aa29.74■■■□□ 2.35
RNF220-209ENST00000474064 PLCH2O75038 1416 aa29.72■■■□□ 2.35
RNF220-209ENST00000474064 EFCAB2Q5VUJ9 269 aa29.71■■■□□ 2.35
RNF220-209ENST00000474064 ARHGEF12Q9NZN5 1544 aa29.69■■■□□ 2.34
RNF220-209ENST00000474064 TEX14Q8IWB6 1497 aa29.67■■■□□ 2.34
RNF220-209ENST00000474064 NBPF8Q3BBV2 869 aa29.67■■■□□ 2.34
RNF220-209ENST00000474064 HSPA5P11021 654 aaKnown RBP29.66■■■□□ 2.34
RNF220-209ENST00000474064 PLEKHH2Q8IVE3 1493 aa29.66■■■□□ 2.34
RNF220-209ENST00000474064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.63■■■□□ 2.335e-9■■□□□ 13.5
RNF220-209ENST00000474064 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
RNF220-209ENST00000474064 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
RNF220-209ENST00000474064 ZNF326Q5BKZ1 582 aaKnown RBP29.58■■■□□ 2.33
RNF220-209ENST00000474064 MAST1Q9Y2H9 1570 aa29.58■■■□□ 2.33
RNF220-209ENST00000474064 TRAPPC8Q9Y2L5 1435 aa29.58■■■□□ 2.33
RNF220-209ENST00000474064 KDM5DQ9BY66 1539 aa29.57■■■□□ 2.32
RNF220-209ENST00000474064 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
RNF220-209ENST00000474064 ABCC1P33527 1531 aa29.54■■■□□ 2.32
RNF220-209ENST00000474064 ASXL2Q76L83 1435 aa29.53■■■□□ 2.32
RNF220-209ENST00000474064 BCANQ96GW7 911 aa29.53■■■□□ 2.32
RNF220-209ENST00000474064 FAM135AQ9P2D6 1515 aa29.52■■■□□ 2.32
RNF220-209ENST00000474064 NPM1P06748 294 aaKnown RBP eCLIP29.5■■■□□ 2.31
RNF220-209ENST00000474064 PLXNC1O60486 1568 aa29.49■■■□□ 2.31
RNF220-209ENST00000474064 SPAG9O60271 1321 aaKnown RBP29.48■■■□□ 2.31
RNF220-209ENST00000474064 WASHC2AQ641Q2 1341 aa29.48■■■□□ 2.31
RNF220-209ENST00000474064 ANP32CO43423 234 aa29.46■■■□□ 2.31
RNF220-209ENST00000474064 FANCAO15360 1455 aa29.46■■■□□ 2.31
RNF220-209ENST00000474064 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.3
RNF220-209ENST00000474064 KDM2AQ9Y2K7 1162 aa29.44■■■□□ 2.3
RNF220-209ENST00000474064 MYT1LQ9UL68 1186 aa29.44■■■□□ 2.3
RNF220-209ENST00000474064 ARAP3Q8WWN8 1544 aa29.41■■■□□ 2.3
RNF220-209ENST00000474064 C11orf95C9JLR9 678 aaPredicted RBP29.41■■■□□ 2.3
RNF220-209ENST00000474064 UNC13BO14795 1591 aa29.4■■■□□ 2.3
RNF220-209ENST00000474064 ABCA9Q8IUA7 1624 aa29.4■■■□□ 2.3
RNF220-209ENST00000474064 ERBINQ96RT1 1412 aa29.39■■■□□ 2.3
RNF220-209ENST00000474064 DCAF11Q8TEB1 546 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms