RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
FN1-219ENST00000474036 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
FN1-219ENST00000474036 PPP1R37O75864 691 aa12.06□□□□□ -0.48
FN1-219ENST00000474036 DOK7Q18PE1 504 aa12.05□□□□□ -0.48
FN1-219ENST00000474036 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
FN1-219ENST00000474036 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
FN1-219ENST00000474036 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
FN1-219ENST00000474036 ABCC9O60706 1549 aa12.05□□□□□ -0.48
FN1-219ENST00000474036 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
FN1-219ENST00000474036 KIF3CO14782 793 aa12□□□□□ -0.49
FN1-219ENST00000474036 GPR153Q6NV75 609 aa12□□□□□ -0.49
FN1-219ENST00000474036 C2orf72A6NCS6 295 aa11.99□□□□□ -0.49
FN1-219ENST00000474036 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.491e-9■■□□□ 11.6
FN1-219ENST00000474036 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
FN1-219ENST00000474036 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
FN1-219ENST00000474036 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
FN1-219ENST00000474036 ERBB3P21860 1342 aa11.95□□□□□ -0.5
FN1-219ENST00000474036 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
FN1-219ENST00000474036 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
FN1-219ENST00000474036 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
FN1-219ENST00000474036 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
FN1-219ENST00000474036 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
FN1-219ENST00000474036 TMC2Q8TDI7 906 aa11.83□□□□□ -0.52
FN1-219ENST00000474036 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
FN1-219ENST00000474036 NUDT7P0C024 238 aa11.81□□□□□ -0.52
FN1-219ENST00000474036 ZNF687Q8N1G0 1237 aa11.81□□□□□ -0.52
FN1-219ENST00000474036 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
FN1-219ENST00000474036 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
FN1-219ENST00000474036 SLC34A2O95436 690 aa11.78□□□□□ -0.52
FN1-219ENST00000474036 DSG2Q14126 1118 aa11.75□□□□□ -0.53
FN1-219ENST00000474036 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
FN1-219ENST00000474036 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
FN1-219ENST00000474036 FOXK1P85037 733 aa11.73□□□□□ -0.53
FN1-219ENST00000474036 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
FN1-219ENST00000474036 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
FN1-219ENST00000474036 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
FN1-219ENST00000474036 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
FN1-219ENST00000474036 PTCD2Q8WV60 388 aaKnown RBP11.68□□□□□ -0.54
FN1-219ENST00000474036 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
FN1-219ENST00000474036 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
FN1-219ENST00000474036 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
FN1-219ENST00000474036 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
FN1-219ENST00000474036 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
FN1-219ENST00000474036 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
FN1-219ENST00000474036 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
FN1-219ENST00000474036 LSM11P83369 360 aaKnown RBP eCLIP11.63□□□□□ -0.55
FN1-219ENST00000474036 RNF166Q96A37 237 aaPredicted RBP11.6□□□□□ -0.55
FN1-219ENST00000474036 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
FN1-219ENST00000474036 OXER1Q8TDS5 423 aa11.58□□□□□ -0.56
FN1-219ENST00000474036 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
FN1-219ENST00000474036 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
FN1-219ENST00000474036 PPP1R15BQ5SWA1 713 aa11.57□□□□□ -0.56
FN1-219ENST00000474036 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
FN1-219ENST00000474036 PBX2P40425 430 aa11.55□□□□□ -0.56
FN1-219ENST00000474036 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
FN1-219ENST00000474036 PSEN2P49810 448 aa11.53□□□□□ -0.56
FN1-219ENST00000474036 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
FN1-219ENST00000474036 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
FN1-219ENST00000474036 ARHGAP33O14559 1287 aa11.51□□□□□ -0.57
FN1-219ENST00000474036 PDE4AP27815 886 aa11.51□□□□□ -0.57
FN1-219ENST00000474036 TBC1D12O60347 775 aa11.5□□□□□ -0.57
FN1-219ENST00000474036 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
FN1-219ENST00000474036 PTGER2P43116 358 aa11.47□□□□□ -0.57
FN1-219ENST00000474036 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
FN1-219ENST00000474036 MFSD10Q14728 455 aa11.46□□□□□ -0.57
FN1-219ENST00000474036 PPP4R3BQ5MIZ7 849 aa11.45□□□□□ -0.58
FN1-219ENST00000474036 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
FN1-219ENST00000474036 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
FN1-219ENST00000474036 HRO43593 1189 aa11.42□□□□□ -0.58
FN1-219ENST00000474036 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
FN1-219ENST00000474036 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
FN1-219ENST00000474036 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
FN1-219ENST00000474036 EVI5O60447 810 aa11.4□□□□□ -0.58
FN1-219ENST00000474036 FOSBP53539 338 aa11.4□□□□□ -0.58
FN1-219ENST00000474036 TK2O00142 265 aa11.38□□□□□ -0.59
FN1-219ENST00000474036 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
FN1-219ENST00000474036 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
FN1-219ENST00000474036 MAP3K9P80192 1104 aa11.34□□□□□ -0.59
FN1-219ENST00000474036 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
FN1-219ENST00000474036 VPS9D1Q9Y2B5 631 aa11.34□□□□□ -0.59
FN1-219ENST00000474036 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
FN1-219ENST00000474036 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
FN1-219ENST00000474036 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
FN1-219ENST00000474036 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
FN1-219ENST00000474036 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
FN1-219ENST00000474036 PTPREP23469 700 aa11.27□□□□□ -0.61
FN1-219ENST00000474036 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
FN1-219ENST00000474036 DPYSL4O14531 572 aa11.26□□□□□ -0.61
FN1-219ENST00000474036 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
FN1-219ENST00000474036 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
FN1-219ENST00000474036 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
FN1-219ENST00000474036 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
FN1-219ENST00000474036 COL9A1P20849 921 aa11.23□□□□□ -0.61
FN1-219ENST00000474036 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
FN1-219ENST00000474036 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
FN1-219ENST00000474036 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
FN1-219ENST00000474036 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
FN1-219ENST00000474036 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
FN1-219ENST00000474036 PHF14O94880 888 aa11.18□□□□□ -0.62
FN1-219ENST00000474036 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms