RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
GPCPD1-204ENST00000473797 KIF3CO14782 793 aa11.97□□□□□ -0.49
GPCPD1-204ENST00000473797 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
GPCPD1-204ENST00000473797 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
GPCPD1-204ENST00000473797 RIMBP2O15034 1052 aa11.95□□□□□ -0.5
GPCPD1-204ENST00000473797 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
GPCPD1-204ENST00000473797 HS3ST6Q96QI5 342 aa11.93□□□□□ -0.5
GPCPD1-204ENST00000473797 PPP1R37O75864 691 aa11.92□□□□□ -0.5
GPCPD1-204ENST00000473797 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
GPCPD1-204ENST00000473797 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
GPCPD1-204ENST00000473797 GPR153Q6NV75 609 aa11.91□□□□□ -0.5
GPCPD1-204ENST00000473797 C2orf72A6NCS6 295 aa11.88□□□□□ -0.51
GPCPD1-204ENST00000473797 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
GPCPD1-204ENST00000473797 KRTAP3-3Q9BYR6 98 aa11.84□□□□□ -0.51
GPCPD1-204ENST00000473797 KRTAP3-2Q9BYR7 98 aa11.84□□□□□ -0.51
GPCPD1-204ENST00000473797 SLC34A2O95436 690 aa11.83□□□□□ -0.52
GPCPD1-204ENST00000473797 ERBB3P21860 1342 aa11.83□□□□□ -0.52
GPCPD1-204ENST00000473797 SPNS2Q8IVW8 549 aa11.81□□□□□ -0.52
GPCPD1-204ENST00000473797 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
GPCPD1-204ENST00000473797 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
GPCPD1-204ENST00000473797 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
GPCPD1-204ENST00000473797 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
GPCPD1-204ENST00000473797 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
GPCPD1-204ENST00000473797 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
GPCPD1-204ENST00000473797 FOXK1P85037 733 aa11.74□□□□□ -0.53
GPCPD1-204ENST00000473797 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
GPCPD1-204ENST00000473797 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.536e-13■■■■□ 26.3
GPCPD1-204ENST00000473797 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
GPCPD1-204ENST00000473797 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
GPCPD1-204ENST00000473797 GTPBP6O43824 516 aaPredicted RBP11.7□□□□□ -0.54
GPCPD1-204ENST00000473797 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
GPCPD1-204ENST00000473797 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
GPCPD1-204ENST00000473797 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
GPCPD1-204ENST00000473797 NUDT7P0C024 238 aa11.66□□□□□ -0.54
GPCPD1-204ENST00000473797 DSG2Q14126 1118 aa11.66□□□□□ -0.54
GPCPD1-204ENST00000473797 CRISPLD2Q9H0B8 497 aa11.66□□□□□ -0.54
GPCPD1-204ENST00000473797 LHX6Q9UPM6 363 aa11.62□□□□□ -0.55
GPCPD1-204ENST00000473797 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
GPCPD1-204ENST00000473797 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
GPCPD1-204ENST00000473797 PDE4AP27815 886 aa11.58□□□□□ -0.56
GPCPD1-204ENST00000473797 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
GPCPD1-204ENST00000473797 TBC1D12O60347 775 aa11.57□□□□□ -0.56
GPCPD1-204ENST00000473797 PBX2P40425 430 aa11.56□□□□□ -0.56
GPCPD1-204ENST00000473797 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
GPCPD1-204ENST00000473797 PPP1R15BQ5SWA1 713 aa11.54□□□□□ -0.56
GPCPD1-204ENST00000473797 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
GPCPD1-204ENST00000473797 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
GPCPD1-204ENST00000473797 PTGER2P43116 358 aa11.52□□□□□ -0.57
GPCPD1-204ENST00000473797 LSM11P83369 360 aaKnown RBP eCLIP11.51□□□□□ -0.57
GPCPD1-204ENST00000473797 MFSD10Q14728 455 aa11.51□□□□□ -0.57
GPCPD1-204ENST00000473797 BBXQ8WY36 941 aaPredicted RBP11.49□□□□□ -0.57
GPCPD1-204ENST00000473797 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
GPCPD1-204ENST00000473797 ANKRD13DQ6ZTN6 518 aa11.47□□□□□ -0.57
GPCPD1-204ENST00000473797 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
GPCPD1-204ENST00000473797 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
GPCPD1-204ENST00000473797 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
GPCPD1-204ENST00000473797 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
GPCPD1-204ENST00000473797 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
GPCPD1-204ENST00000473797 CADPS2Q86UW7 1296 aa11.44□□□□□ -0.58
GPCPD1-204ENST00000473797 AXIN2Q9Y2T1 843 aa11.44□□□□□ -0.58
GPCPD1-204ENST00000473797 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
GPCPD1-204ENST00000473797 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
GPCPD1-204ENST00000473797 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
GPCPD1-204ENST00000473797 TK2O00142 265 aa11.39□□□□□ -0.59
GPCPD1-204ENST00000473797 FOSBP53539 338 aa11.37□□□□□ -0.59
GPCPD1-204ENST00000473797 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
GPCPD1-204ENST00000473797 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
GPCPD1-204ENST00000473797 EVI5O60447 810 aa11.36□□□□□ -0.59
GPCPD1-204ENST00000473797 PSEN2P49810 448 aa11.35□□□□□ -0.59
GPCPD1-204ENST00000473797 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
GPCPD1-204ENST00000473797 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
GPCPD1-204ENST00000473797 HRO43593 1189 aa11.34□□□□□ -0.59
GPCPD1-204ENST00000473797 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
GPCPD1-204ENST00000473797 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
GPCPD1-204ENST00000473797 MAP3K9P80192 1104 aa11.33□□□□□ -0.6
GPCPD1-204ENST00000473797 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
GPCPD1-204ENST00000473797 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
GPCPD1-204ENST00000473797 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
GPCPD1-204ENST00000473797 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
GPCPD1-204ENST00000473797 KCNH8Q96L42 1107 aa11.29□□□□□ -0.6
GPCPD1-204ENST00000473797 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
GPCPD1-204ENST00000473797 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
GPCPD1-204ENST00000473797 PTPREP23469 700 aa11.25□□□□□ -0.61
GPCPD1-204ENST00000473797 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
GPCPD1-204ENST00000473797 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
GPCPD1-204ENST00000473797 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
GPCPD1-204ENST00000473797 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
GPCPD1-204ENST00000473797 PHF14O94880 888 aa11.21□□□□□ -0.61
GPCPD1-204ENST00000473797 ZBED2Q9BTP6 218 aa11.21□□□□□ -0.61
GPCPD1-204ENST00000473797 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
GPCPD1-204ENST00000473797 DPYSL4O14531 572 aa11.19□□□□□ -0.62
GPCPD1-204ENST00000473797 FBXW7Q969H0 707 aa11.19□□□□□ -0.62
GPCPD1-204ENST00000473797 HCSTQ9UBK5 93 aa11.19□□□□□ -0.62
GPCPD1-204ENST00000473797 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
GPCPD1-204ENST00000473797 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
GPCPD1-204ENST00000473797 EPAS1Q99814 870 aa11.16□□□□□ -0.62
GPCPD1-204ENST00000473797 ARIH1Q9Y4X5 557 aaPredicted RBP11.16□□□□□ -0.62
GPCPD1-204ENST00000473797 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
GPCPD1-204ENST00000473797 PPP1R3GB7ZBB8 358 aa11.14□□□□□ -0.63
GPCPD1-204ENST00000473797 PDIA6Q15084 440 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms