RNA–Protein interactions for RNA: ENST00000473140.1

AGAP3-210, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-210ENST00000473140 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
AGAP3-210ENST00000473140 ATP1B4Q9UN42 357 aaPredicted RBP24.01■■□□□ 1.43
AGAP3-210ENST00000473140 HECW1Q76N89 1606 aa24.01■■□□□ 1.43
AGAP3-210ENST00000473140 ATP10AO60312 1499 aa24■■□□□ 1.43
AGAP3-210ENST00000473140 DMRT2Q9Y5R5 561 aa23.98■■□□□ 1.43
AGAP3-210ENST00000473140 CDK13Q14004 1512 aaKnown RBP23.96■■□□□ 1.43
AGAP3-210ENST00000473140 FER1L4A9Z1Z3 1794 aa23.95■■□□□ 1.42
AGAP3-210ENST00000473140 C9orf84Q5VXU9 1444 aa23.94■■□□□ 1.42
AGAP3-210ENST00000473140 FMN1Q68DA7 1419 aa23.94■■□□□ 1.42
AGAP3-210ENST00000473140 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
AGAP3-210ENST00000473140 SIGLEC1Q9BZZ2 1709 aa23.92■■□□□ 1.42
AGAP3-210ENST00000473140 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
AGAP3-210ENST00000473140 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
AGAP3-210ENST00000473140 CEBPAP49715 358 aaPredicted RBP23.89■■□□□ 1.41
AGAP3-210ENST00000473140 ZNF518AQ6AHZ1 1483 aa23.88■■□□□ 1.41
AGAP3-210ENST00000473140 MYO5CQ9NQX4 1742 aa23.87■■□□□ 1.41
AGAP3-210ENST00000473140 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
AGAP3-210ENST00000473140 SETD1BQ9UPS6 1966 aaKnown RBP23.85■■□□□ 1.41
AGAP3-210ENST00000473140 PREX1Q8TCU6 1659 aa23.85■■□□□ 1.41
AGAP3-210ENST00000473140 CLIP1P30622 1438 aa23.84■■□□□ 1.41
AGAP3-210ENST00000473140 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
AGAP3-210ENST00000473140 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.4
AGAP3-210ENST00000473140 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.4
AGAP3-210ENST00000473140 ARHGAP5Q13017 1502 aa23.81■■□□□ 1.4
AGAP3-210ENST00000473140 KIF14Q15058 1648 aa23.81■■□□□ 1.4
AGAP3-210ENST00000473140 EHMT2Q96KQ7 1210 aa23.79■■□□□ 1.4
AGAP3-210ENST00000473140 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
AGAP3-210ENST00000473140 KDM5CP41229 1560 aa23.77■■□□□ 1.4
AGAP3-210ENST00000473140 MLH3Q9UHC1 1453 aa23.75■■□□□ 1.39
AGAP3-210ENST00000473140 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
AGAP3-210ENST00000473140 PTPRTO14522 1441 aa23.73■■□□□ 1.39
AGAP3-210ENST00000473140 DISP3Q9P2K9 1392 aa23.72■■□□□ 1.39
AGAP3-210ENST00000473140 STRCQ7RTU9 1775 aa23.71■■□□□ 1.39
AGAP3-210ENST00000473140 DIP2CQ9Y2E4 1556 aa23.69■■□□□ 1.38
AGAP3-210ENST00000473140 TRAPPC8Q9Y2L5 1435 aa23.69■■□□□ 1.38
AGAP3-210ENST00000473140 AGLP35573 1532 aa23.69■■□□□ 1.38
AGAP3-210ENST00000473140 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
AGAP3-210ENST00000473140 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
AGAP3-210ENST00000473140 SOCS7O14512 581 aa23.63■■□□□ 1.37
AGAP3-210ENST00000473140 C3P01024 1663 aa23.63■■□□□ 1.37
AGAP3-210ENST00000473140 ABCA6Q8N139 1617 aa23.62■■□□□ 1.37
AGAP3-210ENST00000473140 CCDC18Q5T9S5 1454 aa23.62■■□□□ 1.37
AGAP3-210ENST00000473140 CASKIN1Q8WXD9 1431 aa23.6■■□□□ 1.37
AGAP3-210ENST00000473140 ABCC1P33527 1531 aa23.6■■□□□ 1.37
AGAP3-210ENST00000473140 ILDR2Q71H61 639 aa23.6■■□□□ 1.37
AGAP3-210ENST00000473140 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
AGAP3-210ENST00000473140 IQSEC2Q5JU85 1478 aa23.58■■□□□ 1.37
AGAP3-210ENST00000473140 ZNF777Q9ULD5 760 aaPredicted RBP23.57■■□□□ 1.36
AGAP3-210ENST00000473140 NPATQ14207 1427 aa23.56■■□□□ 1.36
AGAP3-210ENST00000473140 NCOA1Q15788 1441 aa23.56■■□□□ 1.36
AGAP3-210ENST00000473140 SPAG9O60271 1321 aaKnown RBP23.56■■□□□ 1.36
AGAP3-210ENST00000473140 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
AGAP3-210ENST00000473140 ITSN2Q9NZM3 1697 aa23.55■■□□□ 1.36
AGAP3-210ENST00000473140 ZMYM3Q14202 1370 aa23.54■■□□□ 1.36
AGAP3-210ENST00000473140 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
AGAP3-210ENST00000473140 KIDINS220Q9ULH0 1771 aa23.54■■□□□ 1.36
AGAP3-210ENST00000473140 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
AGAP3-210ENST00000473140 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.35
AGAP3-210ENST00000473140 SAMD9LQ8IVG5 1584 aa23.48■■□□□ 1.35
AGAP3-210ENST00000473140 PKD2Q13563 968 aa23.48■■□□□ 1.35
AGAP3-210ENST00000473140 MROH2AA6NES4 1674 aa23.48■■□□□ 1.35
AGAP3-210ENST00000473140 CDC42BPAQ5VT25 1732 aa23.47■■□□□ 1.35
AGAP3-210ENST00000473140 CFDP1Q9UEE9 299 aaPredicted RBP23.47■■□□□ 1.35
AGAP3-210ENST00000473140 PPP6R1Q9UPN7 881 aa23.47■■□□□ 1.35
AGAP3-210ENST00000473140 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
AGAP3-210ENST00000473140 FYCO1Q9BQS8 1478 aa23.46■■□□□ 1.35
AGAP3-210ENST00000473140 NCKAP5LQ9HCH0 1330 aa23.46■■□□□ 1.35
AGAP3-210ENST00000473140 PLEKHH2Q8IVE3 1493 aa23.45■■□□□ 1.34
AGAP3-210ENST00000473140 KIAA1107Q9UPP5 1409 aa23.45■■□□□ 1.34
AGAP3-210ENST00000473140 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
AGAP3-210ENST00000473140 GPATCH8Q9UKJ3 1502 aaKnown RBP23.44■■□□□ 1.34
AGAP3-210ENST00000473140 GGT6Q6P531 493 aa23.43■■□□□ 1.34
AGAP3-210ENST00000473140 UBAP1LF5GYI3 381 aa23.42■■□□□ 1.34
AGAP3-210ENST00000473140 SYCP2Q9BX26 1530 aa23.41■■□□□ 1.34
AGAP3-210ENST00000473140 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
AGAP3-210ENST00000473140 A2MP01023 1474 aa23.4■■□□□ 1.34
AGAP3-210ENST00000473140 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.34
AGAP3-210ENST00000473140 ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.34
AGAP3-210ENST00000473140 PLA2R1Q13018 1463 aa23.39■■□□□ 1.34
AGAP3-210ENST00000473140 ATP7AQ04656 1500 aa23.38■■□□□ 1.33
AGAP3-210ENST00000473140 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
AGAP3-210ENST00000473140 CLTCQ00610 1675 aaKnown RBP23.34■■□□□ 1.33
AGAP3-210ENST00000473140 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.33
AGAP3-210ENST00000473140 PLXNC1O60486 1568 aa23.32■■□□□ 1.32
AGAP3-210ENST00000473140 TCOF1Q13428 1488 aaKnown RBP23.32■■□□□ 1.32
AGAP3-210ENST00000473140 CEP170BQ9Y4F5 1589 aaPredicted RBP23.31■■□□□ 1.32
AGAP3-210ENST00000473140 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
AGAP3-210ENST00000473140 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
AGAP3-210ENST00000473140 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
AGAP3-210ENST00000473140 RTEL1-TNFRSF6BF6WH68 1400 aa23.26■■□□□ 1.31
AGAP3-210ENST00000473140 ADGBQ8N7X0 1667 aa23.26■■□□□ 1.31
AGAP3-210ENST00000473140 A2ML1A8K2U0 1454 aa23.26■■□□□ 1.31
AGAP3-210ENST00000473140 DHX29Q7Z478 1369 aaKnown RBP23.26■■□□□ 1.31
AGAP3-210ENST00000473140 TOM1O60784 492 aa23.25■■□□□ 1.31
AGAP3-210ENST00000473140 ZNF644Q9H582 1327 aaPredicted RBP23.24■■□□□ 1.31
AGAP3-210ENST00000473140 RSPH4AQ5TD94 716 aa23.23■■□□□ 1.31
AGAP3-210ENST00000473140 KIF3BO15066 747 aa23.21■■□□□ 1.31
AGAP3-210ENST00000473140 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
AGAP3-210ENST00000473140 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
AGAP3-210ENST00000473140 ANKLE2Q86XL3 938 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms