RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
NPIPA1-203ENST00000472413 SAFB2Q14151 953 aaKnown RBP eCLIP20.6■□□□□ 0.89
NPIPA1-203ENST00000472413 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
NPIPA1-203ENST00000472413 HNRNPMP52272 730 aaKnown RBP eCLIP20.59■□□□□ 0.89
NPIPA1-203ENST00000472413 WASHC2CQ9Y4E1 1318 aa20.58■□□□□ 0.89
NPIPA1-203ENST00000472413 PTPRGP23470 1445 aa20.58■□□□□ 0.89
NPIPA1-203ENST00000472413 NCLP19338 710 aaKnown RBP20.57■□□□□ 0.88
NPIPA1-203ENST00000472413 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
NPIPA1-203ENST00000472413 HSPA5P11021 654 aaKnown RBP20.55■□□□□ 0.88
NPIPA1-203ENST00000472413 RAB3GAP2Q9H2M9 1393 aa20.55■□□□□ 0.88
NPIPA1-203ENST00000472413 RTF1Q92541 710 aaKnown RBP20.54■□□□□ 0.88
NPIPA1-203ENST00000472413 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
NPIPA1-203ENST00000472413 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
NPIPA1-203ENST00000472413 GOLGA6L22H0YM25 854 aa20.53■□□□□ 0.88
NPIPA1-203ENST00000472413 SOX12O15370 315 aa20.53■□□□□ 0.88
NPIPA1-203ENST00000472413 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
NPIPA1-203ENST00000472413 OS9Q13438 667 aaPredicted RBP20.51■□□□□ 0.87
NPIPA1-203ENST00000472413 FOXD1Q16676 465 aa20.51■□□□□ 0.87
NPIPA1-203ENST00000472413 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
NPIPA1-203ENST00000472413 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
NPIPA1-203ENST00000472413 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
NPIPA1-203ENST00000472413 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
NPIPA1-203ENST00000472413 CDK11BP21127 795 aaKnown RBP20.5■□□□□ 0.87
NPIPA1-203ENST00000472413 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
NPIPA1-203ENST00000472413 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
NPIPA1-203ENST00000472413 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
NPIPA1-203ENST00000472413 RALBP1Q15311 655 aa20.46■□□□□ 0.87
NPIPA1-203ENST00000472413 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
NPIPA1-203ENST00000472413 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
NPIPA1-203ENST00000472413 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
NPIPA1-203ENST00000472413 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
NPIPA1-203ENST00000472413 GOLGA2Q08379 1002 aa20.44■□□□□ 0.86
NPIPA1-203ENST00000472413 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
NPIPA1-203ENST00000472413 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
NPIPA1-203ENST00000472413 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
NPIPA1-203ENST00000472413 IPO8O15397 1037 aaKnown RBP20.4■□□□□ 0.86
NPIPA1-203ENST00000472413 ZRSR1Q15695 479 aaKnown RBP20.4■□□□□ 0.86
NPIPA1-203ENST00000472413 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
NPIPA1-203ENST00000472413 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.855e-7■■□□□ 12.5
NPIPA1-203ENST00000472413 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
NPIPA1-203ENST00000472413 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
NPIPA1-203ENST00000472413 NBR1Q14596 966 aa20.36■□□□□ 0.85
NPIPA1-203ENST00000472413 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
NPIPA1-203ENST00000472413 CCDC144AA2RUR9 1427 aa20.35■□□□□ 0.85
NPIPA1-203ENST00000472413 VGFO15240 615 aaPredicted RBP20.34■□□□□ 0.85
NPIPA1-203ENST00000472413 IGF1RP08069 1367 aa20.34■□□□□ 0.85
NPIPA1-203ENST00000472413 KCNJ4P48050 445 aa20.34■□□□□ 0.85
NPIPA1-203ENST00000472413 RGS3P49796 1198 aa20.33■□□□□ 0.85
NPIPA1-203ENST00000472413 FGD1P98174 961 aa20.33■□□□□ 0.85
NPIPA1-203ENST00000472413 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
NPIPA1-203ENST00000472413 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
NPIPA1-203ENST00000472413 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
NPIPA1-203ENST00000472413 MCCP23508 829 aa20.25■□□□□ 0.83
NPIPA1-203ENST00000472413 NUTM2DQ5VT03 806 aaPredicted RBP20.25■□□□□ 0.83
NPIPA1-203ENST00000472413 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
NPIPA1-203ENST00000472413 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
NPIPA1-203ENST00000472413 MYOM3Q5VTT5 1437 aa20.24■□□□□ 0.83
NPIPA1-203ENST00000472413 AMPHP49418 695 aa20.24■□□□□ 0.83
NPIPA1-203ENST00000472413 RUSC2Q8N2Y8 1516 aa20.24■□□□□ 0.83
NPIPA1-203ENST00000472413 TRAK1Q9UPV9 953 aa20.23■□□□□ 0.83
NPIPA1-203ENST00000472413 NLRP13Q86W25 1043 aa20.23■□□□□ 0.83
NPIPA1-203ENST00000472413 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
NPIPA1-203ENST00000472413 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
NPIPA1-203ENST00000472413 GRIN2BQ13224 1484 aa20.22■□□□□ 0.83
NPIPA1-203ENST00000472413 GLIPR1L2Q4G1C9 344 aa20.2■□□□□ 0.82
NPIPA1-203ENST00000472413 TRIM44Q96DX7 344 aaPredicted RBP20.2■□□□□ 0.82
NPIPA1-203ENST00000472413 TMX4Q9H1E5 349 aaPredicted RBP20.2■□□□□ 0.82
NPIPA1-203ENST00000472413 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
NPIPA1-203ENST00000472413 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
NPIPA1-203ENST00000472413 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
NPIPA1-203ENST00000472413 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.825e-7■■■■□ 22.4
NPIPA1-203ENST00000472413 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.19■□□□□ 0.82
NPIPA1-203ENST00000472413 ERICH6BQ5W0A0 696 aa20.17■□□□□ 0.82
NPIPA1-203ENST00000472413 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
NPIPA1-203ENST00000472413 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
NPIPA1-203ENST00000472413 NAP1L2Q9ULW6 460 aaPredicted RBP20.16■□□□□ 0.82
NPIPA1-203ENST00000472413 ZNF330Q9Y3S2 320 aaPredicted RBP20.16■□□□□ 0.82
NPIPA1-203ENST00000472413 CUX1P39880 1505 aa20.15■□□□□ 0.82
NPIPA1-203ENST00000472413 KIF15Q9NS87 1388 aa20.14■□□□□ 0.81
NPIPA1-203ENST00000472413 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
NPIPA1-203ENST00000472413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.14■□□□□ 0.81
NPIPA1-203ENST00000472413 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
NPIPA1-203ENST00000472413 COG3Q96JB2 828 aa20.13■□□□□ 0.81
NPIPA1-203ENST00000472413 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 HSCBQ8IWL3 235 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 CFTRP13569 1480 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 ST20-MTHFSA0A0A6YYL1 179 aa20.12■□□□□ 0.81
NPIPA1-203ENST00000472413 HMMRO75330 724 aa20.11■□□□□ 0.81
NPIPA1-203ENST00000472413 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
NPIPA1-203ENST00000472413 PTMAP06454 111 aaKnown RBP20.1■□□□□ 0.81
NPIPA1-203ENST00000472413 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
NPIPA1-203ENST00000472413 SMC4Q9NTJ3 1288 aa20.09■□□□□ 0.81
NPIPA1-203ENST00000472413 GOLGA6L4A6NEF3 574 aa20.08■□□□□ 0.8
NPIPA1-203ENST00000472413 PMFBP1Q8TBY8 1022 aa20.08■□□□□ 0.8
NPIPA1-203ENST00000472413 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
NPIPA1-203ENST00000472413 GPATCH3Q96I76 525 aa20.07■□□□□ 0.8
NPIPA1-203ENST00000472413 MYBBP1AQ9BQG0 1328 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms