RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
CLTC-204ENST00000472129 EMP3P54852 163 aa12.79□□□□□ -0.36
CLTC-204ENST00000472129 G3V3G9 751 aa12.78□□□□□ -0.36
CLTC-204ENST00000472129 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
CLTC-204ENST00000472129 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
CLTC-204ENST00000472129 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
CLTC-204ENST00000472129 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
CLTC-204ENST00000472129 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
CLTC-204ENST00000472129 MMRN1Q13201 1228 aa12.73□□□□□ -0.37
CLTC-204ENST00000472129 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
CLTC-204ENST00000472129 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
CLTC-204ENST00000472129 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
CLTC-204ENST00000472129 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
CLTC-204ENST00000472129 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
CLTC-204ENST00000472129 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
CLTC-204ENST00000472129 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
CLTC-204ENST00000472129 KRTAP3-3Q9BYR6 98 aa12.67□□□□□ -0.38
CLTC-204ENST00000472129 KRTAP3-2Q9BYR7 98 aa12.67□□□□□ -0.38
CLTC-204ENST00000472129 TMEM92Q6UXU6 159 aa12.65□□□□□ -0.38
CLTC-204ENST00000472129 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
CLTC-204ENST00000472129 DOK7Q18PE1 504 aa12.61□□□□□ -0.39
CLTC-204ENST00000472129 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
CLTC-204ENST00000472129 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
CLTC-204ENST00000472129 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
CLTC-204ENST00000472129 KIF3CO14782 793 aa12.53□□□□□ -0.4
CLTC-204ENST00000472129 ERBB3P21860 1342 aa12.53□□□□□ -0.4
CLTC-204ENST00000472129 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
CLTC-204ENST00000472129 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
CLTC-204ENST00000472129 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
CLTC-204ENST00000472129 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
CLTC-204ENST00000472129 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
CLTC-204ENST00000472129 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
CLTC-204ENST00000472129 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
CLTC-204ENST00000472129 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
CLTC-204ENST00000472129 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
CLTC-204ENST00000472129 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
CLTC-204ENST00000472129 DSG2Q14126 1118 aa12.43□□□□□ -0.42
CLTC-204ENST00000472129 PDE4AP27815 886 aa12.42□□□□□ -0.42
CLTC-204ENST00000472129 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
CLTC-204ENST00000472129 FOXK1P85037 733 aa12.41□□□□□ -0.42
CLTC-204ENST00000472129 PLPP6Q8IY26 295 aa12.39□□□□□ -0.43
CLTC-204ENST00000472129 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
CLTC-204ENST00000472129 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
CLTC-204ENST00000472129 PPP1R15BQ5SWA1 713 aa12.36□□□□□ -0.43
CLTC-204ENST00000472129 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■□□□□ 11.1
CLTC-204ENST00000472129 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
CLTC-204ENST00000472129 MFSD10Q14728 455 aa12.34□□□□□ -0.43
CLTC-204ENST00000472129 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
CLTC-204ENST00000472129 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
CLTC-204ENST00000472129 ZNF316A6NFI3 1004 aaPredicted RBP12.28□□□□□ -0.44
CLTC-204ENST00000472129 SLC34A2O95436 690 aa12.27□□□□□ -0.45
CLTC-204ENST00000472129 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
CLTC-204ENST00000472129 PCDHGA4Q9Y5G9 962 aa12.25□□□□□ -0.45
CLTC-204ENST00000472129 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLTC-204ENST00000472129 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
CLTC-204ENST00000472129 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
CLTC-204ENST00000472129 WDR70Q9NW82 654 aa12.23□□□□□ -0.45
CLTC-204ENST00000472129 NUDT7P0C024 238 aa12.22□□□□□ -0.45
CLTC-204ENST00000472129 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
CLTC-204ENST00000472129 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
CLTC-204ENST00000472129 ANKRD13DQ6ZTN6 518 aa12.2□□□□□ -0.46
CLTC-204ENST00000472129 KDM2AQ9Y2K7 1162 aa12.19□□□□□ -0.46
CLTC-204ENST00000472129 LHX6Q9UPM6 363 aa12.17□□□□□ -0.46
CLTC-204ENST00000472129 PTGER2P43116 358 aa12.16□□□□□ -0.46
CLTC-204ENST00000472129 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLTC-204ENST00000472129 E2F4Q16254 413 aa12.16□□□□□ -0.46
CLTC-204ENST00000472129 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
CLTC-204ENST00000472129 TBC1D12O60347 775 aa12.14□□□□□ -0.47
CLTC-204ENST00000472129 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
CLTC-204ENST00000472129 DPYSL4O14531 572 aa12.12□□□□□ -0.47
CLTC-204ENST00000472129 MAP3K9P80192 1104 aa12.12□□□□□ -0.47
CLTC-204ENST00000472129 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
CLTC-204ENST00000472129 PBX2P40425 430 aa12.1□□□□□ -0.47
CLTC-204ENST00000472129 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
CLTC-204ENST00000472129 EVI5O60447 810 aa12.08□□□□□ -0.48
CLTC-204ENST00000472129 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
CLTC-204ENST00000472129 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
CLTC-204ENST00000472129 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
CLTC-204ENST00000472129 PDIA6Q15084 440 aa11.99□□□□□ -0.49
CLTC-204ENST00000472129 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
CLTC-204ENST00000472129 ARHGAP33O14559 1287 aa11.98□□□□□ -0.49
CLTC-204ENST00000472129 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CLTC-204ENST00000472129 ADGRD1Q6QNK2 874 aa11.97□□□□□ -0.49
CLTC-204ENST00000472129 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
CLTC-204ENST00000472129 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
CLTC-204ENST00000472129 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
CLTC-204ENST00000472129 FOSBP53539 338 aa11.94□□□□□ -0.5
CLTC-204ENST00000472129 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
CLTC-204ENST00000472129 DDX12PQ92771 950 aa11.94□□□□□ -0.5
CLTC-204ENST00000472129 PSEN2P49810 448 aa11.93□□□□□ -0.5
CLTC-204ENST00000472129 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
CLTC-204ENST00000472129 PCDHGA10Q9Y5H3 936 aa11.92□□□□□ -0.5
CLTC-204ENST00000472129 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
CLTC-204ENST00000472129 TK2O00142 265 aa11.89□□□□□ -0.51
CLTC-204ENST00000472129 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
CLTC-204ENST00000472129 HRO43593 1189 aa11.88□□□□□ -0.51
CLTC-204ENST00000472129 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
CLTC-204ENST00000472129 PHF14O94880 888 aa11.87□□□□□ -0.51
CLTC-204ENST00000472129 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
CLTC-204ENST00000472129 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms